RNA–Protein interactions for RNA: ENST00000429629.6

GARNL3-204, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-204ENST00000429629 XDHP47989 1333 aa18.64■□□□□ 0.57
GARNL3-204ENST00000429629 SRGAP3O43295 1099 aa18.63■□□□□ 0.57
GARNL3-204ENST00000429629 ATP2B4P23634 1241 aa18.63■□□□□ 0.57
GARNL3-204ENST00000429629 POLA2Q14181 598 aa18.63■□□□□ 0.57
GARNL3-204ENST00000429629 OLFM4Q6UX06 510 aa18.63■□□□□ 0.57
GARNL3-204ENST00000429629 ZC3H4Q9UPT8 1303 aaKnown RBP18.63■□□□□ 0.57
GARNL3-204ENST00000429629 SLX4Q8IY92 1834 aa18.63■□□□□ 0.57
GARNL3-204ENST00000429629 EYA2O00167 538 aa18.62■□□□□ 0.57
GARNL3-204ENST00000429629 GPSM2P81274 684 aa18.62■□□□□ 0.57
GARNL3-204ENST00000429629 CNNM1Q9NRU3 951 aa18.62■□□□□ 0.57
GARNL3-204ENST00000429629 ANKIB1Q9P2G1 1089 aa18.62■□□□□ 0.57
GARNL3-204ENST00000429629 MROH5Q6ZUA9 1318 aa18.62■□□□□ 0.57
GARNL3-204ENST00000429629 CHRNDQ07001 517 aa18.61■□□□□ 0.57
GARNL3-204ENST00000429629 CEP85Q6P2H3 762 aa18.61■□□□□ 0.57
GARNL3-204ENST00000429629 TBC1D16Q8TBP0 767 aa18.61■□□□□ 0.57
GARNL3-204ENST00000429629 ZNF594Q96JF6 807 aaPredicted RBP18.61■□□□□ 0.57
GARNL3-204ENST00000429629 EYA3Q99504 573 aa18.61■□□□□ 0.57
GARNL3-204ENST00000429629 GGA1Q9UJY5 639 aa18.61■□□□□ 0.57
GARNL3-204ENST00000429629 UTRNP46939 3433 aa18.61■□□□□ 0.57
GARNL3-204ENST00000429629 ARFGEF1Q9Y6D6 1849 aa18.6■□□□□ 0.57
GARNL3-204ENST00000429629 IL15P40933 162 aaPredicted RBP18.6■□□□□ 0.57
GARNL3-204ENST00000429629 KIAA2012Q0VF49 1180 aa18.6■□□□□ 0.57
GARNL3-204ENST00000429629 C15orf52Q6ZUT6 534 aaKnown RBP18.6■□□□□ 0.57
GARNL3-204ENST00000429629 POLLQ9UGP5 575 aa18.6■□□□□ 0.57
GARNL3-204ENST00000429629 NOP58Q9Y2X3 529 aaKnown RBP18.6■□□□□ 0.57
GARNL3-204ENST00000429629 PNMA6EA0A0J9YXQ4 647 aa18.59■□□□□ 0.57
GARNL3-204ENST00000429629 HMMRO75330 724 aa18.59■□□□□ 0.57
GARNL3-204ENST00000429629 IARSP41252 1262 aaKnown RBP18.59■□□□□ 0.57
GARNL3-204ENST00000429629 UBE4AQ14139 1066 aa18.59■□□□□ 0.57
GARNL3-204ENST00000429629 CENPBP07199 599 aaPredicted RBP18.58■□□□□ 0.56
GARNL3-204ENST00000429629 PRELPP51888 382 aa18.58■□□□□ 0.56
GARNL3-204ENST00000429629 WASHC4Q2M389 1173 aa18.58■□□□□ 0.56
GARNL3-204ENST00000429629 C9orf131Q5VYM1 1079 aa18.58■□□□□ 0.56
GARNL3-204ENST00000429629 ATG9AQ7Z3C6 839 aa18.58■□□□□ 0.56
GARNL3-204ENST00000429629 PUS3Q9BZE2 481 aaKnown RBP18.58■□□□□ 0.56
GARNL3-204ENST00000429629 ZC3H12CQ9C0D7 883 aaKnown RBP18.58■□□□□ 0.56
GARNL3-204ENST00000429629 C6orf229H3BNL8 230 aa18.57■□□□□ 0.56
GARNL3-204ENST00000429629 PDE8BO95263 885 aa18.57■□□□□ 0.56
GARNL3-204ENST00000429629 RASSF7Q02833 373 aa18.57■□□□□ 0.56
GARNL3-204ENST00000429629 LRRC24Q50LG9 513 aa18.57■□□□□ 0.56
GARNL3-204ENST00000429629 C1orf115Q9H7X2 142 aa18.57■□□□□ 0.56
GARNL3-204ENST00000429629 ZNF277Q9NRM2 450 aaPredicted RBP18.57■□□□□ 0.56
GARNL3-204ENST00000429629 ZNF804BA4D1E1 1349 aa18.56■□□□□ 0.56
GARNL3-204ENST00000429629 UFL1O94874 794 aa18.56■□□□□ 0.56
GARNL3-204ENST00000429629 HSP90AB4PQ58FF6 505 aa18.56■□□□□ 0.56
GARNL3-204ENST00000429629 VGLL2Q8N8G2 317 aa18.56■□□□□ 0.56
GARNL3-204ENST00000429629 KLHDC4Q8TBB5 520 aa18.56■□□□□ 0.56
GARNL3-204ENST00000429629 JDP2Q8WYK2 163 aa18.56■□□□□ 0.56
GARNL3-204ENST00000429629 CRBNQ96SW2 442 aa18.56■□□□□ 0.56
GARNL3-204ENST00000429629 RNF181Q9P0P0 153 aa18.56■□□□□ 0.56
GARNL3-204ENST00000429629 CEP126Q9P2H0 1117 aa18.56■□□□□ 0.56
GARNL3-204ENST00000429629 MYH3P11055 1940 aa18.55■□□□□ 0.56
GARNL3-204ENST00000429629 COL4A1P02462 1669 aa18.55■□□□□ 0.56
GARNL3-204ENST00000429629 PPIP5K2O43314 1243 aa18.55■□□□□ 0.56
GARNL3-204ENST00000429629 G3BP1Q13283 466 aaKnown RBP eCLIP18.55■□□□□ 0.56
GARNL3-204ENST00000429629 METTL24Q5JXM2 366 aa18.55■□□□□ 0.56
GARNL3-204ENST00000429629 SLC51AQ86UW1 340 aa18.55■□□□□ 0.56
GARNL3-204ENST00000429629 SIRT2Q8IXJ6 389 aa18.55■□□□□ 0.56
GARNL3-204ENST00000429629 LARGE2Q8N3Y3 721 aa18.55■□□□□ 0.56
GARNL3-204ENST00000429629 MED23Q9ULK4 1368 aa18.55■□□□□ 0.56
GARNL3-204ENST00000429629 LRRC37AA6NMS7 1700 aa18.54■□□□□ 0.56
GARNL3-204ENST00000429629 FZD9O00144 591 aa18.54■□□□□ 0.56
GARNL3-204ENST00000429629 ZBTB22O15209 634 aa18.54■□□□□ 0.56
GARNL3-204ENST00000429629 PA2G4Q9UQ80 394 aaKnown RBP18.54■□□□□ 0.56
GARNL3-204ENST00000429629 TAF5LO75529 589 aa18.53■□□□□ 0.56
GARNL3-204ENST00000429629 FGFR2P21802 821 aa18.53■□□□□ 0.56
GARNL3-204ENST00000429629 KCNJ4P48050 445 aa18.53■□□□□ 0.56
GARNL3-204ENST00000429629 PODNQ7Z5L7 613 aa18.53■□□□□ 0.56
GARNL3-204ENST00000429629 GPR108Q9NPR9 543 aa18.53■□□□□ 0.56
GARNL3-204ENST00000429629 ZNRF3Q9ULT6 936 aa18.53■□□□□ 0.56
GARNL3-204ENST00000429629 AKAP2Q9Y2D5 859 aa18.53■□□□□ 0.56
GARNL3-204ENST00000429629 IRS2Q9Y4H2 1338 aa18.52■□□□□ 0.56
GARNL3-204ENST00000429629 SURF6O75683 361 aaKnown RBP18.52■□□□□ 0.56
GARNL3-204ENST00000429629 PUM3Q15397 648 aaKnown RBP18.52■□□□□ 0.56
GARNL3-204ENST00000429629 AOC3Q16853 763 aa18.52■□□□□ 0.56
GARNL3-204ENST00000429629 ERC1Q8IUD2 1116 aa18.52■□□□□ 0.56
GARNL3-204ENST00000429629 NIM1KQ8IY84 436 aa18.52■□□□□ 0.56
GARNL3-204ENST00000429629 HELBQ8NG08 1087 aaPredicted RBP18.52■□□□□ 0.56
GARNL3-204ENST00000429629 LPIN2Q92539 896 aa18.52■□□□□ 0.56
GARNL3-204ENST00000429629 COA1Q9GZY4 146 aa18.52■□□□□ 0.56
GARNL3-204ENST00000429629 SIL1Q9H173 461 aa18.52■□□□□ 0.56
GARNL3-204ENST00000429629 FER1L6Q2WGJ9 1857 aa18.52■□□□□ 0.55
GARNL3-204ENST00000429629 RAB11FIP3O75154 756 aa18.5■□□□□ 0.55
GARNL3-204ENST00000429629 DPY19L2Q6NUT2 758 aa18.5■□□□□ 0.55
GARNL3-204ENST00000429629 PCDHB15Q9Y5E8 787 aa18.5■□□□□ 0.55
GARNL3-204ENST00000429629 DUOX1Q9NRD9 1551 aa18.5■□□□□ 0.55
GARNL3-204ENST00000429629 GLTPD2A6NH11 291 aa18.49■□□□□ 0.55
GARNL3-204ENST00000429629 WTIPA6NIX2 430 aaPredicted RBP18.49■□□□□ 0.55
GARNL3-204ENST00000429629 SASH1O94885 1247 aa18.49■□□□□ 0.55
GARNL3-204ENST00000429629 IFIT1P09914 478 aaKnown RBP18.49■□□□□ 0.55
GARNL3-204ENST00000429629 EIF6P56537 245 aaKnown RBP18.49■□□□□ 0.55
GARNL3-204ENST00000429629 EXOC6Q8TAG9 804 aa18.49■□□□□ 0.55
GARNL3-204ENST00000429629 DCTPP1Q9H773 170 aa18.49■□□□□ 0.55
GARNL3-204ENST00000429629 RIMBP2O15034 1052 aa18.48■□□□□ 0.55
GARNL3-204ENST00000429629 SLC5A1P13866 664 aa18.48■□□□□ 0.55
GARNL3-204ENST00000429629 IL1R1P14778 569 aa18.48■□□□□ 0.55
GARNL3-204ENST00000429629 HDAC1Q13547 482 aaPredicted RBP18.48■□□□□ 0.55
GARNL3-204ENST00000429629 FBXO33Q7Z6M2 555 aa18.48■□□□□ 0.55
GARNL3-204ENST00000429629 LTBP1Q14766 1721 aa18.48■□□□□ 0.55
GARNL3-204ENST00000429629 G3V3G9 751 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms