RNA–Protein interactions for RNA: ENST00000428659.1

TIMM9P3-201, Transcript of TIMM9 pseudogene 3, humanhuman

BASIC

Gene TIMM9P3, Length 274 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMM9P3-201ENST00000428659 PDGFAP04085 211 aa6.85□□□□□ -1.31
TIMM9P3-201ENST00000428659 PSAPP07602 524 aa6.85□□□□□ -1.31
TIMM9P3-201ENST00000428659 HOXD8P13378 290 aaPredicted RBP6.85□□□□□ -1.31
TIMM9P3-201ENST00000428659 EIF2AK2P19525 551 aaKnown RBP6.85□□□□□ -1.31
TIMM9P3-201ENST00000428659 TRIM28Q13263 835 aaKnown RBP6.85□□□□□ -1.31
TIMM9P3-201ENST00000428659 NOM1Q5C9Z4 860 aaKnown RBP6.85□□□□□ -1.31
TIMM9P3-201ENST00000428659 ALYREFQ86V81 257 aaKnown RBP6.85□□□□□ -1.31
TIMM9P3-201ENST00000428659 C1orf127Q8N9H9 656 aa6.85□□□□□ -1.31
TIMM9P3-201ENST00000428659 FRRS1LQ9P0K9 344 aa6.85□□□□□ -1.31
TIMM9P3-201ENST00000428659 POLIQ9UNA4 740 aa6.85□□□□□ -1.31
TIMM9P3-201ENST00000428659 FZD6O60353 706 aa6.84□□□□□ -1.31
TIMM9P3-201ENST00000428659 NPR3P17342 541 aa6.84□□□□□ -1.31
TIMM9P3-201ENST00000428659 ABTB2Q8N961 1025 aa6.84□□□□□ -1.31
TIMM9P3-201ENST00000428659 CHRDQ9H2X0 955 aa6.84□□□□□ -1.31
TIMM9P3-201ENST00000428659 ELP3Q9H9T3 547 aa6.84□□□□□ -1.31
TIMM9P3-201ENST00000428659 KANSL3Q9P2N6 904 aa6.84□□□□□ -1.31
TIMM9P3-201ENST00000428659 ABL1P00519 1130 aa6.83□□□□□ -1.32
TIMM9P3-201ENST00000428659 FMR1NBQ8N0W7 255 aaPredicted RBP6.83□□□□□ -1.32
TIMM9P3-201ENST00000428659 TTC9Q92623 222 aa6.83□□□□□ -1.32
TIMM9P3-201ENST00000428659 HHIPQ96QV1 700 aa6.83□□□□□ -1.32
TIMM9P3-201ENST00000428659 RASSF4Q9H2L5 321 aa6.83□□□□□ -1.32
TIMM9P3-201ENST00000428659 PIK3R2O00459 728 aa6.82□□□□□ -1.32
TIMM9P3-201ENST00000428659 TM4SF5O14894 197 aa6.82□□□□□ -1.32
TIMM9P3-201ENST00000428659 ADAM23O75077 832 aa6.82□□□□□ -1.32
TIMM9P3-201ENST00000428659 SOX18P35713 384 aa6.82□□□□□ -1.32
TIMM9P3-201ENST00000428659 PRRT3Q5FWE3 981 aa6.82□□□□□ -1.32
TIMM9P3-201ENST00000428659 GDF6Q6KF10 455 aaPredicted RBP6.82□□□□□ -1.32
TIMM9P3-201ENST00000428659 ABI2Q9NYB9 513 aaPredicted RBP6.82□□□□□ -1.32
TIMM9P3-201ENST00000428659 NFKBIEO00221 500 aa6.81□□□□□ -1.32
TIMM9P3-201ENST00000428659 FKBP4Q02790 459 aaKnown RBP eCLIP6.81□□□□□ -1.32
TIMM9P3-201ENST00000428659 C8orf34Q49A92 452 aa6.81□□□□□ -1.32
TIMM9P3-201ENST00000428659 TTC39BQ5VTQ0 682 aaPredicted RBP6.81□□□□□ -1.32
TIMM9P3-201ENST00000428659 IL22RA1Q8N6P7 574 aa6.81□□□□□ -1.32
TIMM9P3-201ENST00000428659 CEP120Q8N960 986 aa6.81□□□□□ -1.32
TIMM9P3-201ENST00000428659 TPSG1Q9NRR2 321 aa6.81□□□□□ -1.32
TIMM9P3-201ENST00000428659 SALL4Q9UJQ4 1053 aa6.81□□□□□ -1.32
TIMM9P3-201ENST00000428659 FOXD3Q9UJU5 478 aaPredicted RBP6.81□□□□□ -1.32
TIMM9P3-201ENST00000428659 LOC100996750A0A140TA64 210 aa6.8□□□□□ -1.32
TIMM9P3-201ENST00000428659 KIF4AO95239 1232 aa6.8□□□□□ -1.32
TIMM9P3-201ENST00000428659 MZF1P28698 734 aaPredicted RBP6.8□□□□□ -1.32
TIMM9P3-201ENST00000428659 GATA4P43694 442 aa6.8□□□□□ -1.32
TIMM9P3-201ENST00000428659 PCSK7Q16549 785 aa6.8□□□□□ -1.32
TIMM9P3-201ENST00000428659 TXNDC11Q6PKC3 985 aa6.8□□□□□ -1.32
TIMM9P3-201ENST00000428659 XKR5Q6UX68 686 aa6.8□□□□□ -1.32
TIMM9P3-201ENST00000428659 ZNF438Q7Z4V0 828 aa6.8□□□□□ -1.32
TIMM9P3-201ENST00000428659 FBXO11Q86XK2 927 aa6.8□□□□□ -1.32
TIMM9P3-201ENST00000428659 KRTAP4-6Q9BYQ5 205 aa6.8□□□□□ -1.32
TIMM9P3-201ENST00000428659 SH2B1Q9NRF2 756 aaPredicted RBP6.8□□□□□ -1.32
TIMM9P3-201ENST00000428659 ELNP15502 786 aa6.79□□□□□ -1.32
TIMM9P3-201ENST00000428659 CDC25BP30305 580 aa6.79□□□□□ -1.32
TIMM9P3-201ENST00000428659 ADGRE1Q14246 886 aa6.79□□□□□ -1.32
TIMM9P3-201ENST00000428659 MBTPS1Q14703 1052 aa6.79□□□□□ -1.32
TIMM9P3-201ENST00000428659 SETDB1Q15047 1291 aa6.79□□□□□ -1.32
TIMM9P3-201ENST00000428659 RSPO4Q2I0M5 234 aaPredicted RBP6.79□□□□□ -1.32
TIMM9P3-201ENST00000428659 TXNDC2Q86VQ3 553 aa6.79□□□□□ -1.32
TIMM9P3-201ENST00000428659 WFDC8Q8IUA0 241 aa6.79□□□□□ -1.32
TIMM9P3-201ENST00000428659 GALNT11Q8NCW6 608 aa6.79□□□□□ -1.32
TIMM9P3-201ENST00000428659 POP1Q99575 1024 aaKnown RBP6.79□□□□□ -1.32
TIMM9P3-201ENST00000428659 LACRTQ9GZZ8 138 aa6.79□□□□□ -1.32
TIMM9P3-201ENST00000428659 FAM13BQ9NYF5 915 aa6.79□□□□□ -1.32
TIMM9P3-201ENST00000428659 USTQ9Y2C2 406 aa6.79□□□□□ -1.32
TIMM9P3-201ENST00000428659 SPDYE3A6NKU9 549 aa6.78□□□□□ -1.32
TIMM9P3-201ENST00000428659 DLL1O00548 723 aa6.78□□□□□ -1.32
TIMM9P3-201ENST00000428659 EREGO14944 169 aa6.78□□□□□ -1.32
TIMM9P3-201ENST00000428659 ICMTO60725 284 aa6.78□□□□□ -1.32
TIMM9P3-201ENST00000428659 ALX3O95076 343 aa6.78□□□□□ -1.32
TIMM9P3-201ENST00000428659 GHRHP01286 108 aa6.78□□□□□ -1.32
TIMM9P3-201ENST00000428659 ARHGAP4P98171 946 aa6.78□□□□□ -1.32
TIMM9P3-201ENST00000428659 NRG1Q02297 640 aaPredicted RBP6.78□□□□□ -1.32
TIMM9P3-201ENST00000428659 HYAL2Q12891 473 aa6.78□□□□□ -1.32
TIMM9P3-201ENST00000428659 NKAPLQ5M9Q1 402 aa6.78□□□□□ -1.32
TIMM9P3-201ENST00000428659 CEP135Q66GS9 1140 aa6.78□□□□□ -1.32
TIMM9P3-201ENST00000428659 HGSNATQ68CP4 663 aa6.78□□□□□ -1.32
TIMM9P3-201ENST00000428659 PDE12Q6L8Q7 609 aaKnown RBP6.78□□□□□ -1.32
TIMM9P3-201ENST00000428659 LENG1Q96BZ8 264 aaPredicted RBP6.78□□□□□ -1.32
TIMM9P3-201ENST00000428659 KCNK4Q9NYG8 393 aa6.78□□□□□ -1.32
TIMM9P3-201ENST00000428659 FNDC3AQ9Y2H6 1198 aaKnown RBP6.78□□□□□ -1.32
TIMM9P3-201ENST00000428659 LINC01387J3KSC0 135 aa6.77□□□□□ -1.33
TIMM9P3-201ENST00000428659 TNFRSF21O75509 655 aa6.77□□□□□ -1.33
TIMM9P3-201ENST00000428659 APBA3O96018 575 aa6.77□□□□□ -1.33
TIMM9P3-201ENST00000428659 PBX4Q9BYU1 374 aa6.77□□□□□ -1.33
TIMM9P3-201ENST00000428659 LATS2Q9NRM7 1088 aa6.77□□□□□ -1.33
TIMM9P3-201ENST00000428659 POLR3DP05423 398 aaPredicted RBP6.76□□□□□ -1.33
TIMM9P3-201ENST00000428659 EPHA1P21709 976 aa6.76□□□□□ -1.33
TIMM9P3-201ENST00000428659 NOS3P29474 1203 aa6.76□□□□□ -1.33
TIMM9P3-201ENST00000428659 AAMPQ13685 434 aa6.76□□□□□ -1.33
TIMM9P3-201ENST00000428659 SSBP4Q9BWG4 385 aaPredicted RBP6.76□□□□□ -1.33
TIMM9P3-201ENST00000428659 SEMA6BQ9H3T3 888 aa6.76□□□□□ -1.33
TIMM9P3-201ENST00000428659 H3BRB1 525 aa6.75□□□□□ -1.33
TIMM9P3-201ENST00000428659 K7ELQ4 463 aaPredicted RBP6.75□□□□□ -1.33
TIMM9P3-201ENST00000428659 DDX3YO15523 660 aaKnown RBP6.75□□□□□ -1.33
TIMM9P3-201ENST00000428659 FAM13AO94988 1023 aa6.75□□□□□ -1.33
TIMM9P3-201ENST00000428659 CES1P23141 567 aa6.75□□□□□ -1.33
TIMM9P3-201ENST00000428659 ARID4AP29374 1257 aaPredicted RBP6.75□□□□□ -1.33
TIMM9P3-201ENST00000428659 RAC1P63000 192 aa6.75□□□□□ -1.33
TIMM9P3-201ENST00000428659 SF3B2Q13435 895 aaKnown RBP6.75□□□□□ -1.33
TIMM9P3-201ENST00000428659 PEAR1Q5VY43 1037 aaPredicted RBP6.75□□□□□ -1.33
TIMM9P3-201ENST00000428659 USPL1Q5W0Q7 1092 aa6.75□□□□□ -1.33
TIMM9P3-201ENST00000428659 NCAPG2Q86XI2 1143 aa6.75□□□□□ -1.33
TIMM9P3-201ENST00000428659 GJD3Q8N144 294 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms