RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 COL4A1P02462 1669 aa9.76□□□□□ -0.85
HMGA1P4-201ENST00000428643 MROH5Q6ZUA9 1318 aa9.76□□□□□ -0.85
HMGA1P4-201ENST00000428643 COL11A2P13942 1736 aaPredicted RBP9.76□□□□□ -0.85
HMGA1P4-201ENST00000428643 ANKRD31Q8N7Z5 1873 aa9.75□□□□□ -0.85
HMGA1P4-201ENST00000428643 A0A0G2JLW4 131 aa9.75□□□□□ -0.85
HMGA1P4-201ENST00000428643 SMARCA5O60264 1052 aaPredicted RBP9.75□□□□□ -0.85
HMGA1P4-201ENST00000428643 ALDH1B1P30837 517 aa9.75□□□□□ -0.85
HMGA1P4-201ENST00000428643 PRPF40BQ6NWY9 871 aaKnown RBP9.75□□□□□ -0.85
HMGA1P4-201ENST00000428643 AACSQ86V21 672 aa9.75□□□□□ -0.85
HMGA1P4-201ENST00000428643 CHD1LQ86WJ1 897 aa9.75□□□□□ -0.85
HMGA1P4-201ENST00000428643 CNKSR1Q969H4 720 aa9.75□□□□□ -0.85
HMGA1P4-201ENST00000428643 BSDC1Q9NW68 430 aaPredicted RBP9.75□□□□□ -0.85
HMGA1P4-201ENST00000428643 CEP126Q9P2H0 1117 aa9.75□□□□□ -0.85
HMGA1P4-201ENST00000428643 CD2APQ9Y5K6 639 aa9.75□□□□□ -0.85
HMGA1P4-201ENST00000428643 MYH3P11055 1940 aa9.74□□□□□ -0.85
HMGA1P4-201ENST00000428643 BBOX1O75936 387 aa9.74□□□□□ -0.85
HMGA1P4-201ENST00000428643 SASH1O94885 1247 aa9.74□□□□□ -0.85
HMGA1P4-201ENST00000428643 KCNJ4P48050 445 aa9.74□□□□□ -0.85
HMGA1P4-201ENST00000428643 TGFB2P61812 414 aa9.74□□□□□ -0.85
HMGA1P4-201ENST00000428643 CHRNDQ07001 517 aa9.74□□□□□ -0.85
HMGA1P4-201ENST00000428643 ATP2B3Q16720 1220 aa9.74□□□□□ -0.85
HMGA1P4-201ENST00000428643 TMC4Q7Z404 712 aa9.74□□□□□ -0.85
HMGA1P4-201ENST00000428643 CLASRPQ8N2M8 674 aaKnown RBP9.74□□□□□ -0.85
HMGA1P4-201ENST00000428643 HELBQ8NG08 1087 aaPredicted RBP9.74□□□□□ -0.85
HMGA1P4-201ENST00000428643 TMX4Q9H1E5 349 aaPredicted RBP9.74□□□□□ -0.85
HMGA1P4-201ENST00000428643 WWC3Q9ULE0 1092 aa9.74□□□□□ -0.85
HMGA1P4-201ENST00000428643 RIPOR2Q9Y4F9 1068 aa9.74□□□□□ -0.85
HMGA1P4-201ENST00000428643 ZNF609O15014 1411 aa9.73□□□□□ -0.85
HMGA1P4-201ENST00000428643 TAF5LO75529 589 aa9.73□□□□□ -0.85
HMGA1P4-201ENST00000428643 IFIT2P09913 472 aaKnown RBP9.73□□□□□ -0.85
HMGA1P4-201ENST00000428643 RGS3P49796 1198 aa9.73□□□□□ -0.85
HMGA1P4-201ENST00000428643 PUM3Q15397 648 aaKnown RBP9.73□□□□□ -0.85
HMGA1P4-201ENST00000428643 TNNI3KQ59H18 835 aa9.73□□□□□ -0.85
HMGA1P4-201ENST00000428643 SLC51AQ86UW1 340 aa9.73□□□□□ -0.85
HMGA1P4-201ENST00000428643 SKAP1Q86WV1 359 aa9.73□□□□□ -0.85
HMGA1P4-201ENST00000428643 TTLL6Q8N841 843 aa9.73□□□□□ -0.85
HMGA1P4-201ENST00000428643 FHDC1Q9C0D6 1143 aaPredicted RBP9.73□□□□□ -0.85
HMGA1P4-201ENST00000428643 ANKRD2Q9GZV1 360 aa9.73□□□□□ -0.85
HMGA1P4-201ENST00000428643 ANKIB1Q9P2G1 1089 aa9.73□□□□□ -0.85
HMGA1P4-201ENST00000428643 ZNF219Q9P2Y4 722 aaPredicted RBP9.73□□□□□ -0.85
HMGA1P4-201ENST00000428643 MINPP1Q9UNW1 487 aa9.73□□□□□ -0.85
HMGA1P4-201ENST00000428643 AKAP2Q9Y2D5 859 aa9.73□□□□□ -0.85
HMGA1P4-201ENST00000428643 ATP6V0A2Q9Y487 856 aa9.73□□□□□ -0.85
HMGA1P4-201ENST00000428643 FPGT-TNNI3KV9GXZ4 949 aa9.73□□□□□ -0.85
HMGA1P4-201ENST00000428643 A0A1B0GUL7 405 aa9.72□□□□□ -0.85
HMGA1P4-201ENST00000428643 PDE8BO95263 885 aa9.72□□□□□ -0.85
HMGA1P4-201ENST00000428643 VGLL2Q8N8G2 317 aa9.72□□□□□ -0.85
HMGA1P4-201ENST00000428643 NLGN2Q8NFZ4 835 aa9.72□□□□□ -0.85
HMGA1P4-201ENST00000428643 OTUD7AQ8TE49 926 aaPredicted RBP9.72□□□□□ -0.85
HMGA1P4-201ENST00000428643 GPATCH3Q96I76 525 aa9.72□□□□□ -0.85
HMGA1P4-201ENST00000428643 NEUROD6Q96NK8 337 aa9.72□□□□□ -0.85
HMGA1P4-201ENST00000428643 TLR7Q9NYK1 1049 aaKnown RBP9.72□□□□□ -0.85
HMGA1P4-201ENST00000428643 PIM2Q9P1W9 311 aa9.72□□□□□ -0.85
HMGA1P4-201ENST00000428643 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.72□□□□□ -0.85
HMGA1P4-201ENST00000428643 XDHP47989 1333 aa9.72□□□□□ -0.85
HMGA1P4-201ENST00000428643 C21orf2O43822 256 aa9.71□□□□□ -0.86
HMGA1P4-201ENST00000428643 UFL1O94874 794 aa9.71□□□□□ -0.86
HMGA1P4-201ENST00000428643 SLC5A1P13866 664 aa9.71□□□□□ -0.86
HMGA1P4-201ENST00000428643 MX1P20591 662 aa9.71□□□□□ -0.86
HMGA1P4-201ENST00000428643 KCNA3P22001 575 aa9.71□□□□□ -0.86
HMGA1P4-201ENST00000428643 GPSM2P81274 684 aa9.71□□□□□ -0.86
HMGA1P4-201ENST00000428643 DALRD3Q5D0E6 543 aaKnown RBP9.71□□□□□ -0.86
HMGA1P4-201ENST00000428643 GORABQ5T7V8 394 aa9.71□□□□□ -0.86
HMGA1P4-201ENST00000428643 OLFM4Q6UX06 510 aa9.71□□□□□ -0.86
HMGA1P4-201ENST00000428643 DPP8Q6V1X1 898 aaPredicted RBP9.71□□□□□ -0.86
HMGA1P4-201ENST00000428643 SP8Q8IXZ3 490 aa9.71□□□□□ -0.86
HMGA1P4-201ENST00000428643 C16orf71Q8IYS4 520 aaPredicted RBP9.71□□□□□ -0.86
HMGA1P4-201ENST00000428643 EAF2Q96CJ1 260 aaPredicted RBP9.71□□□□□ -0.86
HMGA1P4-201ENST00000428643 DBNDD2Q9BQY9 259 aa9.71□□□□□ -0.86
HMGA1P4-201ENST00000428643 CCDC8Q9H0W5 538 aaPredicted RBP9.71□□□□□ -0.86
HMGA1P4-201ENST00000428643 GPR108Q9NPR9 543 aa9.71□□□□□ -0.86
HMGA1P4-201ENST00000428643 GGA1Q9UJY5 639 aa9.71□□□□□ -0.86
HMGA1P4-201ENST00000428643 NSFL1CQ9UNZ2 370 aaKnown RBP9.71□□□□□ -0.86
HMGA1P4-201ENST00000428643 C6orf229H3BNL8 230 aa9.7□□□□□ -0.86
HMGA1P4-201ENST00000428643 SNAP23O00161 211 aa9.7□□□□□ -0.86
HMGA1P4-201ENST00000428643 IFIT1P09914 478 aaKnown RBP9.7□□□□□ -0.86
HMGA1P4-201ENST00000428643 PDE4AP27815 886 aa9.7□□□□□ -0.86
HMGA1P4-201ENST00000428643 ADORA1P30542 326 aa9.7□□□□□ -0.86
HMGA1P4-201ENST00000428643 CCDC93Q567U6 631 aa9.7□□□□□ -0.86
HMGA1P4-201ENST00000428643 TSHZ3Q63HK5 1081 aa9.7□□□□□ -0.86
HMGA1P4-201ENST00000428643 MPNDQ8N594 471 aa9.7□□□□□ -0.86
HMGA1P4-201ENST00000428643 LPIN2Q92539 896 aa9.7□□□□□ -0.86
HMGA1P4-201ENST00000428643 DBNLQ9UJU6 430 aaKnown RBP9.7□□□□□ -0.86
HMGA1P4-201ENST00000428643 ZNF804BA4D1E1 1349 aa9.7□□□□□ -0.86
HMGA1P4-201ENST00000428643 SPEF2Q9C093 1822 aa9.7□□□□□ -0.86
HMGA1P4-201ENST00000428643 KIF13BQ9NQT8 1826 aa9.7□□□□□ -0.86
HMGA1P4-201ENST00000428643 ATP2B4P23634 1241 aa9.69□□□□□ -0.86
HMGA1P4-201ENST00000428643 TIMM10P62072 90 aa9.69□□□□□ -0.86
HMGA1P4-201ENST00000428643 UBE4AQ14139 1066 aa9.69□□□□□ -0.86
HMGA1P4-201ENST00000428643 SOGA3Q5TF21 947 aa9.69□□□□□ -0.86
HMGA1P4-201ENST00000428643 CC2D2BQ6DHV5 1058 aa9.69□□□□□ -0.86
HMGA1P4-201ENST00000428643 ECHDC1Q9NTX5 307 aa9.69□□□□□ -0.86
HMGA1P4-201ENST00000428643 BCS1LQ9Y276 419 aa9.69□□□□□ -0.86
HMGA1P4-201ENST00000428643 DLEC1Q9Y238 1755 aa9.68□□□□□ -0.86
HMGA1P4-201ENST00000428643 LRRC37AA6NMS7 1700 aa9.68□□□□□ -0.86
HMGA1P4-201ENST00000428643 KIAA1551Q9HCM1 1747 aa9.68□□□□□ -0.86
HMGA1P4-201ENST00000428643 FGFR2P21802 821 aa9.68□□□□□ -0.86
HMGA1P4-201ENST00000428643 KLRK1P26718 216 aa9.68□□□□□ -0.86
HMGA1P4-201ENST00000428643 PDE1AP54750 535 aa9.68□□□□□ -0.86
HMGA1P4-201ENST00000428643 TTC39AQ5SRH9 613 aa9.68□□□□□ -0.86
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