RNA–Protein interactions for RNA: ENST00000428239.5

CDC7-203, Transcript of cell division cycle 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC7, Length 3,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7-203ENST00000428239 CASP7P55210 303 aa8.67□□□□□ -1.02
CDC7-203ENST00000428239 CHRNDQ07001 517 aa8.67□□□□□ -1.02
CDC7-203ENST00000428239 WASHC4Q2M389 1173 aa8.67□□□□□ -1.02
CDC7-203ENST00000428239 B4GALNT3Q6L9W6 998 aa8.67□□□□□ -1.02
CDC7-203ENST00000428239 NIM1KQ8IY84 436 aa8.67□□□□□ -1.02
CDC7-203ENST00000428239 ANKRD44Q8N8A2 993 aa8.67□□□□□ -1.02
CDC7-203ENST00000428239 GJA3Q9Y6H8 435 aa8.67□□□□□ -1.02
CDC7-203ENST00000428239 DOK7Q18PE1 504 aa8.67□□□□□ -1.02
CDC7-203ENST00000428239 LRRC24Q50LG9 513 aa8.67□□□□□ -1.02
CDC7-203ENST00000428239 SP8Q8IXZ3 490 aa8.67□□□□□ -1.02
CDC7-203ENST00000428239 AFDNP55196 1824 aaKnown RBP8.67□□□□□ -1.02
CDC7-203ENST00000428239 XDHP47989 1333 aa8.67□□□□□ -1.02
CDC7-203ENST00000428239 SNAP23O00161 211 aa8.67□□□□□ -1.02
CDC7-203ENST00000428239 EYA2O00167 538 aa8.67□□□□□ -1.02
CDC7-203ENST00000428239 IFIT1P09914 478 aaKnown RBP8.67□□□□□ -1.02
CDC7-203ENST00000428239 GPSM2P81274 684 aa8.67□□□□□ -1.02
CDC7-203ENST00000428239 AOC3Q16853 763 aa8.67□□□□□ -1.02
CDC7-203ENST00000428239 SLC51AQ86UW1 340 aa8.67□□□□□ -1.02
CDC7-203ENST00000428239 RPAP2Q8IXW5 612 aaPredicted RBP8.67□□□□□ -1.02
CDC7-203ENST00000428239 KAZALD1Q96I82 304 aa8.67□□□□□ -1.02
CDC7-203ENST00000428239 BSDC1Q9NW68 430 aaPredicted RBP8.67□□□□□ -1.02
CDC7-203ENST00000428239 BCORQ6W2J9 1755 aa8.67□□□□□ -1.02
CDC7-203ENST00000428239 QSER1Q2KHR3 1735 aa8.66□□□□□ -1.02
CDC7-203ENST00000428239 CSF1RP07333 972 aa8.66□□□□□ -1.02
CDC7-203ENST00000428239 C9orf131Q5VYM1 1079 aa8.66□□□□□ -1.02
CDC7-203ENST00000428239 CCDC136Q96JN2 1154 aa8.66□□□□□ -1.02
CDC7-203ENST00000428239 ZBTB40Q9NUA8 1239 aa8.66□□□□□ -1.02
CDC7-203ENST00000428239 MINPP1Q9UNW1 487 aa8.66□□□□□ -1.02
CDC7-203ENST00000428239 IQSEC3Q9UPP2 1182 aaPredicted RBP8.66□□□□□ -1.02
CDC7-203ENST00000428239 ATP8B2P98198 1209 aa8.66□□□□□ -1.02
CDC7-203ENST00000428239 CHAF1AQ13111 956 aaPredicted RBP8.66□□□□□ -1.02
CDC7-203ENST00000428239 HSP90AB4PQ58FF6 505 aa8.66□□□□□ -1.02
CDC7-203ENST00000428239 CAVIN4Q5BKX8 364 aa8.66□□□□□ -1.02
CDC7-203ENST00000428239 CEP85Q6P2H3 762 aa8.66□□□□□ -1.02
CDC7-203ENST00000428239 DBNDD1Q9H9R9 158 aa8.66□□□□□ -1.02
CDC7-203ENST00000428239 IL1RAPL2Q9NP60 686 aa8.66□□□□□ -1.02
CDC7-203ENST00000428239 SLC5A1P13866 664 aa8.65□□□□□ -1.02
CDC7-203ENST00000428239 IL15P40933 162 aaPredicted RBP8.65□□□□□ -1.02
CDC7-203ENST00000428239 EIF6P56537 245 aaKnown RBP8.65□□□□□ -1.02
CDC7-203ENST00000428239 RWDD1Q9H446 243 aaPredicted RBP8.65□□□□□ -1.02
CDC7-203ENST00000428239 GOLGB1Q14789 3259 aaKnown RBP8.65□□□□□ -1.02
CDC7-203ENST00000428239 UTYO14607 1347 aa8.65□□□□□ -1.02
CDC7-203ENST00000428239 KLRG2A4D1S0 409 aaPredicted RBP8.65□□□□□ -1.02
CDC7-203ENST00000428239 LMNB1P20700 586 aa8.65□□□□□ -1.02
CDC7-203ENST00000428239 ATP2B4P23634 1241 aa8.65□□□□□ -1.02
CDC7-203ENST00000428239 FKBP4Q02790 459 aaKnown RBP eCLIP8.65□□□□□ -1.02
CDC7-203ENST00000428239 JAG2Q9Y219 1238 aa8.65□□□□□ -1.02
CDC7-203ENST00000428239 ZNF804BA4D1E1 1349 aa8.65□□□□□ -1.02
CDC7-203ENST00000428239 IFIT2P09913 472 aaKnown RBP8.65□□□□□ -1.03
CDC7-203ENST00000428239 ATP2B3Q16720 1220 aa8.65□□□□□ -1.03
CDC7-203ENST00000428239 RABL6Q3YEC7 729 aaPredicted RBP8.65□□□□□ -1.03
CDC7-203ENST00000428239 DPY19L2Q6NUT2 758 aa8.65□□□□□ -1.03
CDC7-203ENST00000428239 MROH5Q6ZUA9 1318 aa8.65□□□□□ -1.03
CDC7-203ENST00000428239 IARSP41252 1262 aaKnown RBP8.64□□□□□ -1.03
CDC7-203ENST00000428239 CLASRPQ8N2M8 674 aaKnown RBP8.64□□□□□ -1.03
CDC7-203ENST00000428239 RAD17O75943 681 aa8.64□□□□□ -1.03
CDC7-203ENST00000428239 PTPN12Q05209 780 aaKnown RBP8.64□□□□□ -1.03
CDC7-203ENST00000428239 TFCP2Q12800 502 aa8.64□□□□□ -1.03
CDC7-203ENST00000428239 ERC1Q8IUD2 1116 aa8.64□□□□□ -1.03
CDC7-203ENST00000428239 TBC1D16Q8TBP0 767 aa8.64□□□□□ -1.03
CDC7-203ENST00000428239 AKAP2Q9Y2D5 859 aa8.64□□□□□ -1.03
CDC7-203ENST00000428239 YY1P25490 414 aa8.64□□□□□ -1.03
CDC7-203ENST00000428239 GRIPAP1Q4V328 841 aa8.64□□□□□ -1.03
CDC7-203ENST00000428239 ANKRD45Q5TZF3 282 aa8.64□□□□□ -1.03
CDC7-203ENST00000428239 ZNF804AQ7Z570 1209 aa8.64□□□□□ -1.03
CDC7-203ENST00000428239 AACSQ86V21 672 aa8.64□□□□□ -1.03
CDC7-203ENST00000428239 GNL3LQ9NVN8 582 aaKnown RBP8.64□□□□□ -1.03
CDC7-203ENST00000428239 ANKRD36CQ5JPF3 1778 aa8.63□□□□□ -1.03
CDC7-203ENST00000428239 N4BP2Q86UW6 1770 aaPredicted RBP8.63□□□□□ -1.03
CDC7-203ENST00000428239 PUM3Q15397 648 aaKnown RBP8.63□□□□□ -1.03
CDC7-203ENST00000428239 LEMD3Q9Y2U8 911 aa8.63□□□□□ -1.03
CDC7-203ENST00000428239 NFKBIEO00221 500 aa8.63□□□□□ -1.03
CDC7-203ENST00000428239 GYG1P46976 350 aa8.63□□□□□ -1.03
CDC7-203ENST00000428239 TIMM10P62072 90 aa8.63□□□□□ -1.03
CDC7-203ENST00000428239 CCDC8Q9H0W5 538 aaPredicted RBP8.63□□□□□ -1.03
CDC7-203ENST00000428239 COPRSQ9NQ92 184 aa8.63□□□□□ -1.03
CDC7-203ENST00000428239 POLLQ9UGP5 575 aa8.63□□□□□ -1.03
CDC7-203ENST00000428239 PCDHB15Q9Y5E8 787 aa8.63□□□□□ -1.03
CDC7-203ENST00000428239 PDE8BO95263 885 aa8.62□□□□□ -1.03
CDC7-203ENST00000428239 F8W031 263 aaPredicted RBP8.62□□□□□ -1.03
CDC7-203ENST00000428239 TTC39AQ5SRH9 613 aa8.62□□□□□ -1.03
CDC7-203ENST00000428239 SSH3Q8TE77 659 aa8.62□□□□□ -1.03
CDC7-203ENST00000428239 KIF1BPQ96EK5 621 aa8.62□□□□□ -1.03
CDC7-203ENST00000428239 LRRCC1Q9C099 1032 aa8.62□□□□□ -1.03
CDC7-203ENST00000428239 RIC1Q4ADV7 1423 aa8.62□□□□□ -1.03
CDC7-203ENST00000428239 WTIPA6NIX2 430 aaPredicted RBP8.62□□□□□ -1.03
CDC7-203ENST00000428239 SMARCA5O60264 1052 aaPredicted RBP8.62□□□□□ -1.03
CDC7-203ENST00000428239 LMOD1P29536 600 aaPredicted RBP8.62□□□□□ -1.03
CDC7-203ENST00000428239 HIBADHP31937 336 aaKnown RBP8.62□□□□□ -1.03
CDC7-203ENST00000428239 RBM5P52756 815 aaKnown RBP eCLIP8.62□□□□□ -1.03
CDC7-203ENST00000428239 CCDC158Q5M9N0 1113 aa8.62□□□□□ -1.03
CDC7-203ENST00000428239 TNRC6CQ9HCJ0 1690 aaKnown RBP8.61□□□□□ -1.03
CDC7-203ENST00000428239 A0A1B0GUL7 405 aa8.61□□□□□ -1.03
CDC7-203ENST00000428239 ECE2O60344 883 aa8.61□□□□□ -1.03
CDC7-203ENST00000428239 RBM26Q5T8P6 1007 aaKnown RBP8.61□□□□□ -1.03
CDC7-203ENST00000428239 C16orf71Q8IYS4 520 aaPredicted RBP8.61□□□□□ -1.03
CDC7-203ENST00000428239 LPIN2Q92539 896 aa8.61□□□□□ -1.03
CDC7-203ENST00000428239 GPATCH3Q96I76 525 aa8.61□□□□□ -1.03
CDC7-203ENST00000428239 ABCF2Q9UG63 623 aa8.61□□□□□ -1.03
CDC7-203ENST00000428239 RTL9Q8NET4 1388 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms