RNA–Protein interactions for RNA: ENST00000428153.6

DDR1-235, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,257 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-235ENST00000428153 CYP4F22Q6NT55 531 aa22.43■■□□□ 1.18
DDR1-235ENST00000428153 GLIS2Q9BZE0 524 aaPredicted RBP22.43■■□□□ 1.18
DDR1-235ENST00000428153 ZNF609O15014 1411 aa22.42■■□□□ 1.18
DDR1-235ENST00000428153 BEGAINQ9BUH8 593 aa22.42■■□□□ 1.18
DDR1-235ENST00000428153 ZBTB12Q9Y330 459 aaPredicted RBP22.42■■□□□ 1.18
DDR1-235ENST00000428153 RIMBP2O15034 1052 aa22.41■■□□□ 1.18
DDR1-235ENST00000428153 KSR2Q6VAB6 950 aa22.41■■□□□ 1.18
DDR1-235ENST00000428153 PAXIP1Q6ZW49 1069 aaPredicted RBP22.41■■□□□ 1.18
DDR1-235ENST00000428153 SEC31BQ9NQW1 1179 aa22.41■■□□□ 1.18
DDR1-235ENST00000428153 GGA1Q9UJY5 639 aa22.41■■□□□ 1.18
DDR1-235ENST00000428153 VIL1P09327 827 aaKnown RBP22.4■■□□□ 1.18
DDR1-235ENST00000428153 ANKIB1Q9P2G1 1089 aa22.4■■□□□ 1.18
DDR1-235ENST00000428153 RTL9Q8NET4 1388 aa22.39■■□□□ 1.18
DDR1-235ENST00000428153 IL16Q14005 1332 aa22.39■■□□□ 1.18
DDR1-235ENST00000428153 CA12O43570 354 aa22.39■■□□□ 1.17
DDR1-235ENST00000428153 STK31Q9BXU1 1019 aa22.39■■□□□ 1.17
DDR1-235ENST00000428153 MAP3K2Q9Y2U5 619 aa22.39■■□□□ 1.17
DDR1-235ENST00000428153 XDHP47989 1333 aa22.38■■□□□ 1.17
DDR1-235ENST00000428153 UFL1O94874 794 aa22.38■■□□□ 1.17
DDR1-235ENST00000428153 NEXNQ0ZGT2 675 aa22.38■■□□□ 1.17
DDR1-235ENST00000428153 ANKRD18AQ8IVF6 992 aa22.38■■□□□ 1.17
DDR1-235ENST00000428153 TSPYL6Q8N831 410 aa22.38■■□□□ 1.17
DDR1-235ENST00000428153 SHTN1A0MZ66 631 aa22.37■■□□□ 1.17
DDR1-235ENST00000428153 PI4KAP2A4QPH2 592 aa22.37■■□□□ 1.17
DDR1-235ENST00000428153 IGKV5-2P06315 115 aa22.37■■□□□ 1.17
DDR1-235ENST00000428153 DOK7Q18PE1 504 aa22.37■■□□□ 1.17
DDR1-235ENST00000428153 SAMD7Q7Z3H4 446 aa22.37■■□□□ 1.17
DDR1-235ENST00000428153 WWC1Q8IX03 1113 aa22.37■■□□□ 1.17
DDR1-235ENST00000428153 PI4KAP1Q8N8J0 262 aa22.37■■□□□ 1.17
DDR1-235ENST00000428153 CDC5LQ99459 802 aaKnown RBP22.37■■□□□ 1.17
DDR1-235ENST00000428153 G3V3G9 751 aa22.36■■□□□ 1.17
DDR1-235ENST00000428153 BRPF1P55201 1214 aaPredicted RBP22.36■■□□□ 1.17
DDR1-235ENST00000428153 CTSWP56202 376 aa22.36■■□□□ 1.17
DDR1-235ENST00000428153 DCAF8Q5TAQ9 597 aa22.36■■□□□ 1.17
DDR1-235ENST00000428153 AGBL3Q8NEM8 1001 aa22.36■■□□□ 1.17
DDR1-235ENST00000428153 SCN9AQ15858 1988 aa22.36■■□□□ 1.17
DDR1-235ENST00000428153 ATP2B4P23634 1241 aa22.35■■□□□ 1.17
DDR1-235ENST00000428153 TBC1D10BQ4KMP7 808 aaPredicted RBP22.35■■□□□ 1.17
DDR1-235ENST00000428153 KRT26Q7Z3Y9 468 aa22.35■■□□□ 1.17
DDR1-235ENST00000428153 USP48Q86UV5 1035 aa22.35■■□□□ 1.17
DDR1-235ENST00000428153 DCPSQ96C86 337 aaKnown RBP22.35■■□□□ 1.17
DDR1-235ENST00000428153 KCNQ5Q9NR82 932 aa22.35■■□□□ 1.17
DDR1-235ENST00000428153 PSME4Q14997 1843 aa22.35■■□□□ 1.17
DDR1-235ENST00000428153 MYH3P11055 1940 aa22.34■■□□□ 1.17
DDR1-235ENST00000428153 NOGQ13253 232 aa22.34■■□□□ 1.17
DDR1-235ENST00000428153 GRM1Q13255 1194 aa22.34■■□□□ 1.17
DDR1-235ENST00000428153 TWISTNBQ3B726 338 aaPredicted RBP22.34■■□□□ 1.17
DDR1-235ENST00000428153 PODNQ7Z5L7 613 aa22.34■■□□□ 1.17
DDR1-235ENST00000428153 TSR2Q969E8 191 aaKnown RBP22.34■■□□□ 1.17
DDR1-235ENST00000428153 ZNF408Q9H9D4 720 aa22.34■■□□□ 1.17
DDR1-235ENST00000428153 BSDC1Q9NW68 430 aaPredicted RBP22.34■■□□□ 1.17
DDR1-235ENST00000428153 AOC2O75106 756 aa22.33■■□□□ 1.17
DDR1-235ENST00000428153 ZNF280AP59817 542 aaPredicted RBP22.33■■□□□ 1.17
DDR1-235ENST00000428153 KIF4BQ2VIQ3 1234 aa22.33■■□□□ 1.17
DDR1-235ENST00000428153 RSBN1LQ6PCB5 846 aaPredicted RBP22.33■■□□□ 1.17
DDR1-235ENST00000428153 TTLL11Q8NHH1 800 aa22.33■■□□□ 1.17
DDR1-235ENST00000428153 CACNA1FO60840 1977 aa22.32■■□□□ 1.16
DDR1-235ENST00000428153 NEURL1BA8MQ27 555 aa22.32■■□□□ 1.16
DDR1-235ENST00000428153 EGFRP00533 1210 aa22.32■■□□□ 1.16
DDR1-235ENST00000428153 CCDC184Q52MB2 194 aa22.32■■□□□ 1.16
DDR1-235ENST00000428153 POLR2AP24928 1970 aaKnown RBP22.31■■□□□ 1.16
DDR1-235ENST00000428153 MED23Q9ULK4 1368 aa22.31■■□□□ 1.16
DDR1-235ENST00000428153 H7C1W4 665 aa22.31■■□□□ 1.16
DDR1-235ENST00000428153 SLC4A2P04920 1241 aa22.31■■□□□ 1.16
DDR1-235ENST00000428153 HUNKP57058 714 aa22.31■■□□□ 1.16
DDR1-235ENST00000428153 JARID2Q92833 1246 aaPredicted RBP22.31■■□□□ 1.16
DDR1-235ENST00000428153 CCDC85AQ96PX6 553 aaPredicted RBP22.31■■□□□ 1.16
DDR1-235ENST00000428153 PLA2G12BQ9BX93 195 aa22.31■■□□□ 1.16
DDR1-235ENST00000428153 SULF1Q8IWU6 871 aa22.3■■□□□ 1.16
DDR1-235ENST00000428153 C2orf69Q8N8R5 385 aa22.3■■□□□ 1.16
DDR1-235ENST00000428153 GMLQ99445 158 aa22.3■■□□□ 1.16
DDR1-235ENST00000428153 GBA2Q9HCG7 927 aaPredicted RBP22.3■■□□□ 1.16
DDR1-235ENST00000428153 MINPP1Q9UNW1 487 aa22.3■■□□□ 1.16
DDR1-235ENST00000428153 MMP14P50281 582 aa22.29■■□□□ 1.16
DDR1-235ENST00000428153 RBM26Q5T8P6 1007 aaKnown RBP22.29■■□□□ 1.16
DDR1-235ENST00000428153 PITPNM2Q9BZ72 1349 aa22.29■■□□□ 1.16
DDR1-235ENST00000428153 USP17L3A6NCW0 530 aa22.28■■□□□ 1.16
DDR1-235ENST00000428153 USP17L4A6NCW7 530 aa22.28■■□□□ 1.16
DDR1-235ENST00000428153 FLIIQ13045 1269 aa22.28■■□□□ 1.16
DDR1-235ENST00000428153 CWF19L2Q2TBE0 894 aaKnown RBP22.28■■□□□ 1.16
DDR1-235ENST00000428153 USP17L1Q7RTZ2 530 aa22.28■■□□□ 1.16
DDR1-235ENST00000428153 WDR63Q8IWG1 891 aa22.28■■□□□ 1.16
DDR1-235ENST00000428153 CCDC102AQ96A19 550 aa22.28■■□□□ 1.16
DDR1-235ENST00000428153 GREM2Q9H772 168 aa22.28■■□□□ 1.16
DDR1-235ENST00000428153 GGA3Q9NZ52 723 aa22.28■■□□□ 1.16
DDR1-235ENST00000428153 USP17L8P0C7I0 530 aa22.27■■□□□ 1.16
DDR1-235ENST00000428153 RGMBQ6NW40 437 aa22.27■■□□□ 1.16
DDR1-235ENST00000428153 ABHD8Q96I13 439 aa22.27■■□□□ 1.16
DDR1-235ENST00000428153 MYH16Q9H6N6 1097 aa22.27■■□□□ 1.16
DDR1-235ENST00000428153 LEMD3Q9Y2U8 911 aa22.27■■□□□ 1.16
DDR1-235ENST00000428153 ADM5C9JUS6 153 aa22.26■■□□□ 1.15
DDR1-235ENST00000428153 IGHMBP2P38935 993 aaKnown RBP22.26■■□□□ 1.15
DDR1-235ENST00000428153 CCT4P50991 539 aaKnown RBP22.26■■□□□ 1.15
DDR1-235ENST00000428153 GCKRQ14397 625 aa22.26■■□□□ 1.15
DDR1-235ENST00000428153 G2E3Q7L622 706 aa22.26■■□□□ 1.15
DDR1-235ENST00000428153 UBE3BQ7Z3V4 1068 aa22.26■■□□□ 1.15
DDR1-235ENST00000428153 LINS1Q8NG48 757 aa22.26■■□□□ 1.15
DDR1-235ENST00000428153 MYO3BQ8WXR4 1341 aa22.26■■□□□ 1.15
DDR1-235ENST00000428153 ZEB1P37275 1124 aaPredicted RBP22.25■■□□□ 1.15
DDR1-235ENST00000428153 FKBP1BP68106 108 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms