RNA–Protein interactions for RNA: ENST00000427710.5

RTN4-210, Transcript of reticulon 4, humanhuman

TSL 4

Gene RTN4, Length 589 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-210ENST00000427710 L3MBTL3Q96JM7 780 aaPredicted RBP18.82■□□□□ 0.6
RTN4-210ENST00000427710 VPS33BQ9H267 617 aa18.82■□□□□ 0.6
RTN4-210ENST00000427710 ZNRF3Q9ULT6 936 aa18.82■□□□□ 0.6
RTN4-210ENST00000427710 CT47B1P0C2W7 299 aaPredicted RBP18.81■□□□□ 0.6
RTN4-210ENST00000427710 NBPF7P0C2Y1 421 aaPredicted RBP18.81■□□□□ 0.6
RTN4-210ENST00000427710 HSPA6P17066 643 aa18.81■□□□□ 0.6
RTN4-210ENST00000427710 IGHMBP2P38935 993 aaKnown RBP18.81■□□□□ 0.6
RTN4-210ENST00000427710 CXCL9Q07325 125 aa18.81■□□□□ 0.6
RTN4-210ENST00000427710 LMBR1LQ6UX01 489 aa18.81■□□□□ 0.6
RTN4-210ENST00000427710 TAF1DQ9H5J8 278 aaPredicted RBP18.81■□□□□ 0.6
RTN4-210ENST00000427710 GGA1Q9UJY5 639 aa18.81■□□□□ 0.6
RTN4-210ENST00000427710 MINPP1Q9UNW1 487 aa18.81■□□□□ 0.6
RTN4-210ENST00000427710 EAPPQ56P03 285 aaPredicted RBP18.8■□□□□ 0.6
RTN4-210ENST00000427710 KAZALD1Q96I82 304 aa18.8■□□□□ 0.6
RTN4-210ENST00000427710 ZNF594Q96JF6 807 aaPredicted RBP18.8■□□□□ 0.6
RTN4-210ENST00000427710 KCNQ5Q9NR82 932 aa18.8■□□□□ 0.6
RTN4-210ENST00000427710 BSDC1Q9NW68 430 aaPredicted RBP18.8■□□□□ 0.6
RTN4-210ENST00000427710 PODXL2Q9NZ53 605 aa18.8■□□□□ 0.6
RTN4-210ENST00000427710 HACL1Q9UJ83 578 aa18.8■□□□□ 0.6
RTN4-210ENST00000427710 ANKRD18BA2A2Z9 1011 aa18.79■□□□□ 0.6
RTN4-210ENST00000427710 SMC1BQ8NDV3 1235 aa18.79■□□□□ 0.6
RTN4-210ENST00000427710 EYA3Q99504 573 aa18.79■□□□□ 0.6
RTN4-210ENST00000427710 POLR2AP24928 1970 aaKnown RBP18.79■□□□□ 0.6
RTN4-210ENST00000427710 XDHP47989 1333 aa18.78■□□□□ 0.6
RTN4-210ENST00000427710 IQCA1LA6NCM1 817 aa18.78■□□□□ 0.6
RTN4-210ENST00000427710 ECE2O60344 883 aa18.78■□□□□ 0.6
RTN4-210ENST00000427710 BCAR3O75815 825 aa18.78■□□□□ 0.6
RTN4-210ENST00000427710 EPHX2P34913 555 aa18.78■□□□□ 0.6
RTN4-210ENST00000427710 EPS15P42566 896 aa18.78■□□□□ 0.6
RTN4-210ENST00000427710 SCNN1DP51172 638 aa18.78■□□□□ 0.6
RTN4-210ENST00000427710 CIAPIN1Q6FI81 312 aa18.78■□□□□ 0.6
RTN4-210ENST00000427710 MPHOSPH8Q99549 860 aa18.78■□□□□ 0.6
RTN4-210ENST00000427710 TNNQ9UQP3 1299 aa18.78■□□□□ 0.6
RTN4-210ENST00000427710 PSME4Q14997 1843 aa18.78■□□□□ 0.6
RTN4-210ENST00000427710 ATP2B4P23634 1241 aa18.77■□□□□ 0.6
RTN4-210ENST00000427710 HTRA3P83110 453 aa18.77■□□□□ 0.6
RTN4-210ENST00000427710 FSTL1Q12841 308 aa18.77■□□□□ 0.6
RTN4-210ENST00000427710 IFIT5Q13325 482 aaKnown RBP18.77■□□□□ 0.6
RTN4-210ENST00000427710 ZC3H12CQ9C0D7 883 aaKnown RBP18.77■□□□□ 0.6
RTN4-210ENST00000427710 UTYO14607 1347 aa18.76■□□□□ 0.59
RTN4-210ENST00000427710 CEP350Q5VT06 3117 aa18.76■□□□□ 0.59
RTN4-210ENST00000427710 SHTN1A0MZ66 631 aa18.76■□□□□ 0.59
RTN4-210ENST00000427710 GMPSP49915 693 aaPredicted RBP18.76■□□□□ 0.59
RTN4-210ENST00000427710 HELBQ8NG08 1087 aaPredicted RBP18.76■□□□□ 0.59
RTN4-210ENST00000427710 USP44Q9H0E7 712 aa18.76■□□□□ 0.59
RTN4-210ENST00000427710 BICC1Q9H694 974 aaKnown RBP18.76■□□□□ 0.59
RTN4-210ENST00000427710 CLEC11AQ9Y240 323 aa18.76■□□□□ 0.59
RTN4-210ENST00000427710 ADAMTSL1Q8N6G6 1762 aa18.76■□□□□ 0.59
RTN4-210ENST00000427710 ZBED9Q6R2W3 1325 aa18.75■□□□□ 0.59
RTN4-210ENST00000427710 G3V3G9 751 aa18.75■□□□□ 0.59
RTN4-210ENST00000427710 SNAP23O00161 211 aa18.75■□□□□ 0.59
RTN4-210ENST00000427710 PSMD14O00487 310 aa18.75■□□□□ 0.59
RTN4-210ENST00000427710 LMOD1P29536 600 aaPredicted RBP18.75■□□□□ 0.59
RTN4-210ENST00000427710 CCT4P50991 539 aaKnown RBP18.75■□□□□ 0.59
RTN4-210ENST00000427710 BRPF1P55201 1214 aaPredicted RBP18.75■□□□□ 0.59
RTN4-210ENST00000427710 CHRNDQ07001 517 aa18.75■□□□□ 0.59
RTN4-210ENST00000427710 DCAF8Q5TAQ9 597 aa18.75■□□□□ 0.59
RTN4-210ENST00000427710 ZBTB12Q9Y330 459 aaPredicted RBP18.75■□□□□ 0.59
RTN4-210ENST00000427710 TAF5LO75529 589 aa18.74■□□□□ 0.59
RTN4-210ENST00000427710 KLRK1P26718 216 aa18.74■□□□□ 0.59
RTN4-210ENST00000427710 CCDC57Q2TAC2 916 aa18.74■□□□□ 0.59
RTN4-210ENST00000427710 TAF7LQ5H9L4 462 aa18.74■□□□□ 0.59
RTN4-210ENST00000427710 CHADLQ6NUI6 762 aa18.74■□□□□ 0.59
RTN4-210ENST00000427710 ANKRD44Q8N8A2 993 aa18.74■□□□□ 0.59
RTN4-210ENST00000427710 FRAT1Q92837 279 aaPredicted RBP18.74■□□□□ 0.59
RTN4-210ENST00000427710 API5Q9BZZ5 524 aaKnown RBP18.74■□□□□ 0.59
RTN4-210ENST00000427710 PLIN1O60240 522 aa18.73■□□□□ 0.59
RTN4-210ENST00000427710 TNIP1Q15025 636 aa18.73■□□□□ 0.59
RTN4-210ENST00000427710 TXNRD3Q86VQ6 643 aa18.73■□□□□ 0.59
RTN4-210ENST00000427710 LDHDQ86WU2 507 aa18.73■□□□□ 0.59
RTN4-210ENST00000427710 PUS3Q9BZE2 481 aaKnown RBP18.72■□□□□ 0.59
RTN4-210ENST00000427710 GPRC5DQ9NZD1 345 aa18.72■□□□□ 0.59
RTN4-210ENST00000427710 ZNF646O15015 1829 aaPredicted RBP18.72■□□□□ 0.59
RTN4-210ENST00000427710 KIF16BQ96L93 1317 aa18.72■□□□□ 0.59
RTN4-210ENST00000427710 APLP1P51693 650 aa18.71■□□□□ 0.59
RTN4-210ENST00000427710 MAP1SQ66K74 1059 aaPredicted RBP18.71■□□□□ 0.59
RTN4-210ENST00000427710 LDHAL6AQ6ZMR3 332 aa18.71■□□□□ 0.59
RTN4-210ENST00000427710 ANKRD2Q9GZV1 360 aa18.71■□□□□ 0.59
RTN4-210ENST00000427710 CNNM1Q9NRU3 951 aa18.71■□□□□ 0.59
RTN4-210ENST00000427710 ZNF804BA4D1E1 1349 aa18.71■□□□□ 0.59
RTN4-210ENST00000427710 KCNJ4P48050 445 aa18.7■□□□□ 0.58
RTN4-210ENST00000427710 RABL6Q3YEC7 729 aaPredicted RBP18.7■□□□□ 0.58
RTN4-210ENST00000427710 KLHDC4Q8TBB5 520 aa18.7■□□□□ 0.58
RTN4-210ENST00000427710 CLUAP1Q96AJ1 413 aa18.7■□□□□ 0.58
RTN4-210ENST00000427710 CNOT7Q9UIV1 285 aaKnown RBP18.7■□□□□ 0.58
RTN4-210ENST00000427710 LEMD3Q9Y2U8 911 aa18.7■□□□□ 0.58
RTN4-210ENST00000427710 MED23Q9ULK4 1368 aa18.69■□□□□ 0.58
RTN4-210ENST00000427710 PNMA8AQ86V59 439 aaPredicted RBP18.69■□□□□ 0.58
RTN4-210ENST00000427710 TRPM4Q8TD43 1214 aa18.69■□□□□ 0.58
RTN4-210ENST00000427710 FBXW7Q969H0 707 aa18.69■□□□□ 0.58
RTN4-210ENST00000427710 UBTFL1P0CB47 393 aaPredicted RBP18.68■□□□□ 0.58
RTN4-210ENST00000427710 TRIM27P14373 513 aa18.68■□□□□ 0.58
RTN4-210ENST00000427710 LRRC24Q50LG9 513 aa18.68■□□□□ 0.58
RTN4-210ENST00000427710 MICALL2Q8IY33 904 aa18.68■□□□□ 0.58
RTN4-210ENST00000427710 ARHGAP45Q92619 1136 aa18.68■□□□□ 0.58
RTN4-210ENST00000427710 MEIS3Q99687 375 aa18.68■□□□□ 0.58
RTN4-210ENST00000427710 MXD3Q9BW11 206 aa18.68■□□□□ 0.58
RTN4-210ENST00000427710 ADARB2Q9NS39 739 aaKnown RBP18.68■□□□□ 0.58
RTN4-210ENST00000427710 TRPM7Q96QT4 1865 aa18.68■□□□□ 0.58
RTN4-210ENST00000427710 VIL1P09327 827 aaKnown RBP18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms