RNA–Protein interactions for RNA: ENST00000427645.5

SMARCAL1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-206ENST00000427645 SLX4Q8IY92 1834 aa10.24□□□□□ -0.77
SMARCAL1-206ENST00000427645 SRGAP3O43295 1099 aa10.24□□□□□ -0.77
SMARCAL1-206ENST00000427645 GPTP24298 496 aa10.24□□□□□ -0.77
SMARCAL1-206ENST00000427645 CASP7P55210 303 aa10.24□□□□□ -0.77
SMARCAL1-206ENST00000427645 EAPPQ56P03 285 aaPredicted RBP10.24□□□□□ -0.77
SMARCAL1-206ENST00000427645 SUCLG2Q96I99 432 aa10.24□□□□□ -0.77
SMARCAL1-206ENST00000427645 PLA2G12BQ9BX93 195 aa10.24□□□□□ -0.77
SMARCAL1-206ENST00000427645 NYXQ9GZU5 481 aa10.24□□□□□ -0.77
SMARCAL1-206ENST00000427645 PDZRN3Q9UPQ7 1066 aa10.24□□□□□ -0.77
SMARCAL1-206ENST00000427645 CDHR2Q9BYE9 1310 aa10.24□□□□□ -0.77
SMARCAL1-206ENST00000427645 ZNF541Q9H0D2 1346 aa10.24□□□□□ -0.77
SMARCAL1-206ENST00000427645 LTBP3Q9NS15 1303 aa10.24□□□□□ -0.77
SMARCAL1-206ENST00000427645 CCDC88AQ3V6T2 1871 aa10.23□□□□□ -0.77
SMARCAL1-206ENST00000427645 NPR1P16066 1061 aa10.23□□□□□ -0.77
SMARCAL1-206ENST00000427645 RABL6Q3YEC7 729 aaPredicted RBP10.23□□□□□ -0.77
SMARCAL1-206ENST00000427645 CCDC93Q567U6 631 aa10.23□□□□□ -0.77
SMARCAL1-206ENST00000427645 TPTE2Q6XPS3 522 aa10.23□□□□□ -0.77
SMARCAL1-206ENST00000427645 NUTM1Q86Y26 1132 aa10.23□□□□□ -0.77
SMARCAL1-206ENST00000427645 TAF1DQ9H5J8 278 aaPredicted RBP10.23□□□□□ -0.77
SMARCAL1-206ENST00000427645 BICC1Q9H694 974 aaKnown RBP10.23□□□□□ -0.77
SMARCAL1-206ENST00000427645 CREBZFQ9NS37 354 aa10.23□□□□□ -0.77
SMARCAL1-206ENST00000427645 BCORQ6W2J9 1755 aa10.23□□□□□ -0.77
SMARCAL1-206ENST00000427645 PDE8AO60658 829 aa10.22□□□□□ -0.77
SMARCAL1-206ENST00000427645 RAB11FIP3O75154 756 aa10.22□□□□□ -0.77
SMARCAL1-206ENST00000427645 GTF2E1P29083 439 aaPredicted RBP10.22□□□□□ -0.77
SMARCAL1-206ENST00000427645 FKBP4Q02790 459 aaKnown RBP eCLIP10.22□□□□□ -0.77
SMARCAL1-206ENST00000427645 SUSD4Q5VX71 490 aa10.22□□□□□ -0.77
SMARCAL1-206ENST00000427645 KAZALD1Q96I82 304 aa10.22□□□□□ -0.77
SMARCAL1-206ENST00000427645 CLEC11AQ9Y240 323 aa10.22□□□□□ -0.77
SMARCAL1-206ENST00000427645 SH3TC1Q8TE82 1336 aa10.22□□□□□ -0.77
SMARCAL1-206ENST00000427645 FER1L6Q2WGJ9 1857 aa10.21□□□□□ -0.77
SMARCAL1-206ENST00000427645 PNMA6EA0A0J9YXQ4 647 aa10.21□□□□□ -0.77
SMARCAL1-206ENST00000427645 KLRG2A4D1S0 409 aaPredicted RBP10.21□□□□□ -0.77
SMARCAL1-206ENST00000427645 IRS4O14654 1257 aaPredicted RBP10.21□□□□□ -0.77
SMARCAL1-206ENST00000427645 FOXN1O15353 648 aa10.21□□□□□ -0.77
SMARCAL1-206ENST00000427645 FOXO4P98177 505 aa10.21□□□□□ -0.77
SMARCAL1-206ENST00000427645 SOGA3Q5TF21 947 aa10.21□□□□□ -0.77
SMARCAL1-206ENST00000427645 MAP1SQ66K74 1059 aaPredicted RBP10.21□□□□□ -0.77
SMARCAL1-206ENST00000427645 ERC1Q8IUD2 1116 aa10.21□□□□□ -0.77
SMARCAL1-206ENST00000427645 SYNE4Q8N205 404 aa10.21□□□□□ -0.77
SMARCAL1-206ENST00000427645 FAM89AQ96GI7 184 aa10.21□□□□□ -0.77
SMARCAL1-206ENST00000427645 NOP58Q9Y2X3 529 aaKnown RBP10.21□□□□□ -0.77
SMARCAL1-206ENST00000427645 UBN2Q6ZU65 1347 aa10.21□□□□□ -0.78
SMARCAL1-206ENST00000427645 IQCA1LA6NCM1 817 aa10.2□□□□□ -0.78
SMARCAL1-206ENST00000427645 SURF6O75683 361 aaKnown RBP10.2□□□□□ -0.78
SMARCAL1-206ENST00000427645 ITGBL1O95965 494 aaPredicted RBP10.2□□□□□ -0.78
SMARCAL1-206ENST00000427645 CSF1RP07333 972 aa10.2□□□□□ -0.78
SMARCAL1-206ENST00000427645 EPHX2P34913 555 aa10.2□□□□□ -0.78
SMARCAL1-206ENST00000427645 VEGFBP49765 207 aa10.2□□□□□ -0.78
SMARCAL1-206ENST00000427645 NUCB1Q02818 461 aa10.2□□□□□ -0.78
SMARCAL1-206ENST00000427645 FMR1Q06787 632 aaKnown RBP eCLIP10.2□□□□□ -0.78
SMARCAL1-206ENST00000427645 G3BP1Q13283 466 aaKnown RBP eCLIP10.2□□□□□ -0.78
SMARCAL1-206ENST00000427645 CCDC57Q2TAC2 916 aa10.2□□□□□ -0.78
SMARCAL1-206ENST00000427645 RTL5Q5HYW3 569 aaPredicted RBP10.2□□□□□ -0.78
SMARCAL1-206ENST00000427645 SLC10A5Q5PT55 438 aa10.2□□□□□ -0.78
SMARCAL1-206ENST00000427645 ANKRD45Q5TZF3 282 aa10.2□□□□□ -0.78
SMARCAL1-206ENST00000427645 LMBR1LQ6UX01 489 aa10.2□□□□□ -0.78
SMARCAL1-206ENST00000427645 CHD1LQ86WJ1 897 aa10.2□□□□□ -0.78
SMARCAL1-206ENST00000427645 LDHDQ86WU2 507 aa10.2□□□□□ -0.78
SMARCAL1-206ENST00000427645 JARID2Q92833 1246 aaPredicted RBP10.2□□□□□ -0.78
SMARCAL1-206ENST00000427645 ABCC12Q96J65 1359 aa10.2□□□□□ -0.78
SMARCAL1-206ENST00000427645 L3MBTL3Q96JM7 780 aaPredicted RBP10.2□□□□□ -0.78
SMARCAL1-206ENST00000427645 PASKQ96RG2 1323 aa10.2□□□□□ -0.78
SMARCAL1-206ENST00000427645 COPRSQ9NQ92 184 aa10.2□□□□□ -0.78
SMARCAL1-206ENST00000427645 HACL1Q9UJ83 578 aa10.2□□□□□ -0.78
SMARCAL1-206ENST00000427645 CACNA1SQ13698 1873 aa10.19□□□□□ -0.78
SMARCAL1-206ENST00000427645 NTSR2O95665 410 aa10.19□□□□□ -0.78
SMARCAL1-206ENST00000427645 IARSP41252 1262 aaKnown RBP10.19□□□□□ -0.78
SMARCAL1-206ENST00000427645 EPHA10Q5JZY3 1008 aa10.19□□□□□ -0.78
SMARCAL1-206ENST00000427645 RTKN2Q8IZC4 609 aa10.19□□□□□ -0.78
SMARCAL1-206ENST00000427645 KIF1BPQ96EK5 621 aa10.19□□□□□ -0.78
SMARCAL1-206ENST00000427645 LRRCC1Q9C099 1032 aa10.19□□□□□ -0.78
SMARCAL1-206ENST00000427645 GJA3Q9Y6H8 435 aa10.19□□□□□ -0.78
SMARCAL1-206ENST00000427645 CNTNAP1P78357 1384 aa10.18□□□□□ -0.78
SMARCAL1-206ENST00000427645 TMEM88BA6NKF7 163 aa10.18□□□□□ -0.78
SMARCAL1-206ENST00000427645 FZD9O00144 591 aa10.18□□□□□ -0.78
SMARCAL1-206ENST00000427645 ALDH1B1P30837 517 aa10.18□□□□□ -0.78
SMARCAL1-206ENST00000427645 IFIT5Q13325 482 aaKnown RBP10.18□□□□□ -0.78
SMARCAL1-206ENST00000427645 CCDC152Q4G0S7 254 aa10.18□□□□□ -0.78
SMARCAL1-206ENST00000427645 C3orf67Q6ZVT6 689 aa10.18□□□□□ -0.78
SMARCAL1-206ENST00000427645 CNTROBQ8N137 903 aa10.18□□□□□ -0.78
SMARCAL1-206ENST00000427645 TTLL11Q8NHH1 800 aa10.18□□□□□ -0.78
SMARCAL1-206ENST00000427645 NLRP3Q96P20 1036 aa10.18□□□□□ -0.78
SMARCAL1-206ENST00000427645 CHMP3Q9Y3E7 222 aa10.18□□□□□ -0.78
SMARCAL1-206ENST00000427645 ANKRD18BA2A2Z9 1011 aa10.17□□□□□ -0.78
SMARCAL1-206ENST00000427645 SPDYE2BA6NHP3 402 aa10.17□□□□□ -0.78
SMARCAL1-206ENST00000427645 SPDYE6P0CI01 402 aa10.17□□□□□ -0.78
SMARCAL1-206ENST00000427645 CTSWP56202 376 aa10.17□□□□□ -0.78
SMARCAL1-206ENST00000427645 OS9Q13438 667 aaPredicted RBP10.17□□□□□ -0.78
SMARCAL1-206ENST00000427645 SPDYE2Q495Y8 402 aa10.17□□□□□ -0.78
SMARCAL1-206ENST00000427645 EXOC6BQ9Y2D4 811 aa10.17□□□□□ -0.78
SMARCAL1-206ENST00000427645 MYH3P11055 1940 aa10.17□□□□□ -0.78
SMARCAL1-206ENST00000427645 COL4A5P29400 1685 aa10.16□□□□□ -0.78
SMARCAL1-206ENST00000427645 DICER1Q9UPY3 1922 aaKnown RBP10.16□□□□□ -0.78
SMARCAL1-206ENST00000427645 CIAO1O76071 339 aa10.16□□□□□ -0.78
SMARCAL1-206ENST00000427645 EPS15P42566 896 aa10.16□□□□□ -0.78
SMARCAL1-206ENST00000427645 RFX5P48382 616 aaPredicted RBP10.16□□□□□ -0.78
SMARCAL1-206ENST00000427645 LBX1P52954 281 aa10.16□□□□□ -0.78
SMARCAL1-206ENST00000427645 PTPN12Q05209 780 aaKnown RBP10.16□□□□□ -0.78
SMARCAL1-206ENST00000427645 GRM1Q13255 1194 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms