RNA–Protein interactions for RNA: ENST00000427118.1

AFF3-208, Transcript of AF4/FMR2 family member 3, humanhuman

TSL 4

Gene AFF3, Length 528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-208ENST00000427118 NIM1KQ8IY84 436 aa20.12■□□□□ 0.81
AFF3-208ENST00000427118 CLUAP1Q96AJ1 413 aa20.12■□□□□ 0.81
AFF3-208ENST00000427118 GPR101Q96P66 508 aaPredicted RBP20.12■□□□□ 0.81
AFF3-208ENST00000427118 COG6Q9Y2V7 657 aa20.12■□□□□ 0.81
AFF3-208ENST00000427118 GJA3Q9Y6H8 435 aa20.12■□□□□ 0.81
AFF3-208ENST00000427118 MVPQ14764 893 aaKnown RBP20.11■□□□□ 0.81
AFF3-208ENST00000427118 SLC4A10Q6U841 1118 aa20.11■□□□□ 0.81
AFF3-208ENST00000427118 TMC4Q7Z404 712 aa20.11■□□□□ 0.81
AFF3-208ENST00000427118 SMC1BQ8NDV3 1235 aa20.11■□□□□ 0.81
AFF3-208ENST00000427118 API5Q9BZZ5 524 aaKnown RBP20.11■□□□□ 0.81
AFF3-208ENST00000427118 TAF1DQ9H5J8 278 aaPredicted RBP20.11■□□□□ 0.81
AFF3-208ENST00000427118 ALDH1L1O75891 902 aa20.1■□□□□ 0.81
AFF3-208ENST00000427118 EIF6P56537 245 aaKnown RBP20.1■□□□□ 0.81
AFF3-208ENST00000427118 KIAA2012Q0VF49 1180 aa20.1■□□□□ 0.81
AFF3-208ENST00000427118 SUPT20HQ8NEM7 779 aa20.1■□□□□ 0.81
AFF3-208ENST00000427118 TTLL11Q8NHH1 800 aa20.1■□□□□ 0.81
AFF3-208ENST00000427118 GREM2Q9H772 168 aa20.1■□□□□ 0.81
AFF3-208ENST00000427118 POLLQ9UGP5 575 aa20.1■□□□□ 0.81
AFF3-208ENST00000427118 DDX19BQ9UMR2 479 aa20.1■□□□□ 0.81
AFF3-208ENST00000427118 NSFL1CQ9UNZ2 370 aaKnown RBP20.1■□□□□ 0.81
AFF3-208ENST00000427118 GPC2Q8N158 579 aa20.09■□□□□ 0.81
AFF3-208ENST00000427118 SRCIN1Q9C0H9 1055 aa20.09■□□□□ 0.81
AFF3-208ENST00000427118 IQCA1LA6NCM1 817 aa20.07■□□□□ 0.8
AFF3-208ENST00000427118 YDJCA8MPS7 323 aa20.07■□□□□ 0.8
AFF3-208ENST00000427118 RIMBP2O15034 1052 aa20.07■□□□□ 0.8
AFF3-208ENST00000427118 TRIM27P14373 513 aa20.07■□□□□ 0.8
AFF3-208ENST00000427118 APLP1P51693 650 aa20.07■□□□□ 0.8
AFF3-208ENST00000427118 CXCL9Q07325 125 aa20.07■□□□□ 0.8
AFF3-208ENST00000427118 VPS33BQ9H267 617 aa20.07■□□□□ 0.8
AFF3-208ENST00000427118 HACL1Q9UJ83 578 aa20.07■□□□□ 0.8
AFF3-208ENST00000427118 ZNRF3Q9ULT6 936 aa20.07■□□□□ 0.8
AFF3-208ENST00000427118 ADAMTSL1Q8N6G6 1762 aa20.07■□□□□ 0.8
AFF3-208ENST00000427118 C6orf229H3BNL8 230 aa20.06■□□□□ 0.8
AFF3-208ENST00000427118 RAD17O75943 681 aa20.06■□□□□ 0.8
AFF3-208ENST00000427118 SCNN1DP51172 638 aa20.06■□□□□ 0.8
AFF3-208ENST00000427118 ANKRD18AQ8IVF6 992 aa20.06■□□□□ 0.8
AFF3-208ENST00000427118 TBC1D16Q8TBP0 767 aa20.06■□□□□ 0.8
AFF3-208ENST00000427118 SCN9AQ15858 1988 aa20.05■□□□□ 0.8
AFF3-208ENST00000427118 WTIPA6NIX2 430 aaPredicted RBP20.05■□□□□ 0.8
AFF3-208ENST00000427118 EPHX2P34913 555 aa20.05■□□□□ 0.8
AFF3-208ENST00000427118 EPS15P42566 896 aa20.05■□□□□ 0.8
AFF3-208ENST00000427118 FAM161AQ3B820 660 aa20.05■□□□□ 0.8
AFF3-208ENST00000427118 EAPPQ56P03 285 aaPredicted RBP20.05■□□□□ 0.8
AFF3-208ENST00000427118 PLA2G12BQ9BX93 195 aa20.05■□□□□ 0.8
AFF3-208ENST00000427118 DBNDD1Q9H9R9 158 aa20.05■□□□□ 0.8
AFF3-208ENST00000427118 RTL9Q8NET4 1388 aa20.05■□□□□ 0.8
AFF3-208ENST00000427118 UFL1O94874 794 aa20.04■□□□□ 0.8
AFF3-208ENST00000427118 RLBP1P12271 317 aa20.04■□□□□ 0.8
AFF3-208ENST00000427118 CCT4P50991 539 aaKnown RBP20.04■□□□□ 0.8
AFF3-208ENST00000427118 DOK7Q18PE1 504 aa20.04■□□□□ 0.8
AFF3-208ENST00000427118 WASHC4Q2M389 1173 aa20.04■□□□□ 0.8
AFF3-208ENST00000427118 CHADLQ6NUI6 762 aa20.04■□□□□ 0.8
AFF3-208ENST00000427118 C9orf78Q9NZ63 289 aaPredicted RBP20.04■□□□□ 0.8
AFF3-208ENST00000427118 GRM8O00222 908 aa20.03■□□□□ 0.8
AFF3-208ENST00000427118 EPHA10Q5JZY3 1008 aa20.03■□□□□ 0.8
AFF3-208ENST00000427118 ITPRIPQ8IWB1 547 aa20.03■□□□□ 0.8
AFF3-208ENST00000427118 CDC5LQ99459 802 aaKnown RBP20.03■□□□□ 0.8
AFF3-208ENST00000427118 RWDD1Q9H446 243 aaPredicted RBP20.03■□□□□ 0.8
AFF3-208ENST00000427118 KCNQ5Q9NR82 932 aa20.03■□□□□ 0.8
AFF3-208ENST00000427118 PODXL2Q9NZ53 605 aa20.03■□□□□ 0.8
AFF3-208ENST00000427118 ANKIB1Q9P2G1 1089 aa20.03■□□□□ 0.8
AFF3-208ENST00000427118 CSF1RP07333 972 aa20.02■□□□□ 0.8
AFF3-208ENST00000427118 ITGA6P23229 1130 aa20.02■□□□□ 0.8
AFF3-208ENST00000427118 FOXO4P98177 505 aa20.02■□□□□ 0.8
AFF3-208ENST00000427118 LDHDQ86WU2 507 aa20.02■□□□□ 0.8
AFF3-208ENST00000427118 DNAJC5GQ8N7S2 189 aa20.02■□□□□ 0.8
AFF3-208ENST00000427118 GGA1Q9UJY5 639 aa20.02■□□□□ 0.8
AFF3-208ENST00000427118 SHTN1A0MZ66 631 aa20.01■□□□□ 0.79
AFF3-208ENST00000427118 GMPSP49915 693 aaPredicted RBP20.01■□□□□ 0.79
AFF3-208ENST00000427118 CIAPIN1Q6FI81 312 aa20.01■□□□□ 0.79
AFF3-208ENST00000427118 MINPP1Q9UNW1 487 aa20.01■□□□□ 0.79
AFF3-208ENST00000427118 CLEC11AQ9Y240 323 aa20.01■□□□□ 0.79
AFF3-208ENST00000427118 ECE2O60344 883 aa20■□□□□ 0.79
AFF3-208ENST00000427118 BSDC1Q9NW68 430 aaPredicted RBP20■□□□□ 0.79
AFF3-208ENST00000427118 UTYO14607 1347 aa20■□□□□ 0.79
AFF3-208ENST00000427118 LMOD1P29536 600 aaPredicted RBP19.99■□□□□ 0.79
AFF3-208ENST00000427118 MAP1SQ66K74 1059 aaPredicted RBP19.99■□□□□ 0.79
AFF3-208ENST00000427118 INTS3Q68E01 1043 aaKnown RBP19.99■□□□□ 0.79
AFF3-208ENST00000427118 EYA3Q99504 573 aa19.99■□□□□ 0.79
AFF3-208ENST00000427118 GPRC5DQ9NZD1 345 aa19.99■□□□□ 0.79
AFF3-208ENST00000427118 ZBTB12Q9Y330 459 aaPredicted RBP19.99■□□□□ 0.79
AFF3-208ENST00000427118 XDHP47989 1333 aa19.99■□□□□ 0.79
AFF3-208ENST00000427118 A0A1B0GUL6 1792 aa19.98■□□□□ 0.79
AFF3-208ENST00000427118 PSMD14O00487 310 aa19.98■□□□□ 0.79
AFF3-208ENST00000427118 TMEM57Q8N5G2 664 aa19.98■□□□□ 0.79
AFF3-208ENST00000427118 USP44Q9H0E7 712 aa19.98■□□□□ 0.79
AFF3-208ENST00000427118 TNNQ9UQP3 1299 aa19.98■□□□□ 0.79
AFF3-208ENST00000427118 CHMP3Q9Y3E7 222 aa19.98■□□□□ 0.79
AFF3-208ENST00000427118 IGHMBP2P38935 993 aaKnown RBP19.97■□□□□ 0.79
AFF3-208ENST00000427118 LMBR1LQ6UX01 489 aa19.97■□□□□ 0.79
AFF3-208ENST00000427118 KAZALD1Q96I82 304 aa19.97■□□□□ 0.79
AFF3-208ENST00000427118 SUCLG2Q96I99 432 aa19.97■□□□□ 0.79
AFF3-208ENST00000427118 ZC3H12CQ9C0D7 883 aaKnown RBP19.97■□□□□ 0.79
AFF3-208ENST00000427118 PASKQ96RG2 1323 aa19.97■□□□□ 0.79
AFF3-208ENST00000427118 ITGBL1O95965 494 aaPredicted RBP19.96■□□□□ 0.79
AFF3-208ENST00000427118 NBPF7P0C2Y1 421 aaPredicted RBP19.96■□□□□ 0.79
AFF3-208ENST00000427118 ATP2B4P23634 1241 aa19.96■□□□□ 0.79
AFF3-208ENST00000427118 TNIP1Q15025 636 aa19.96■□□□□ 0.79
AFF3-208ENST00000427118 PNMA8AQ86V59 439 aaPredicted RBP19.96■□□□□ 0.79
AFF3-208ENST00000427118 PSME4Q14997 1843 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms