RNA–Protein interactions for RNA: ENST00000424438.5

RPUSD3-204, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2 BASIC

Gene RPUSD3, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-204ENST00000424438 RNF186Q9NXI6 227 aa20.33■□□□□ 0.85
RPUSD3-204ENST00000424438 HSP90B1P14625 803 aaKnown RBP20.32■□□□□ 0.84
RPUSD3-204ENST00000424438 KIF23Q02241 960 aaPredicted RBP20.32■□□□□ 0.84
RPUSD3-204ENST00000424438 DBF4Q9UBU7 674 aaPredicted RBP20.32■□□□□ 0.84
RPUSD3-204ENST00000424438 C6orf229H3BNL8 230 aa20.31■□□□□ 0.84
RPUSD3-204ENST00000424438 EGFRP00533 1210 aa20.31■□□□□ 0.84
RPUSD3-204ENST00000424438 ZNF157P51786 506 aaPredicted RBP20.31■□□□□ 0.84
RPUSD3-204ENST00000424438 ZNF280AP59817 542 aaPredicted RBP20.31■□□□□ 0.84
RPUSD3-204ENST00000424438 RPS8P62241 208 aaKnown RBP20.31■□□□□ 0.84
RPUSD3-204ENST00000424438 GPSM2P81274 684 aa20.31■□□□□ 0.84
RPUSD3-204ENST00000424438 KIF4BQ2VIQ3 1234 aa20.31■□□□□ 0.84
RPUSD3-204ENST00000424438 SULF1Q8IWU6 871 aa20.31■□□□□ 0.84
RPUSD3-204ENST00000424438 TBC1D16Q8TBP0 767 aa20.31■□□□□ 0.84
RPUSD3-204ENST00000424438 CHPF2Q9P2E5 772 aa20.31■□□□□ 0.84
RPUSD3-204ENST00000424438 PAPPA2Q9BXP8 1791 aa20.31■□□□□ 0.84
RPUSD3-204ENST00000424438 RALBP1Q15311 655 aa20.3■□□□□ 0.84
RPUSD3-204ENST00000424438 AGBL3Q8NEM8 1001 aa20.3■□□□□ 0.84
RPUSD3-204ENST00000424438 FAM89AQ96GI7 184 aa20.3■□□□□ 0.84
RPUSD3-204ENST00000424438 HYPKQ9NX55 129 aa20.3■□□□□ 0.84
RPUSD3-204ENST00000424438 PITPNM2Q9BZ72 1349 aa20.29■□□□□ 0.84
RPUSD3-204ENST00000424438 COL4A1P02462 1669 aa20.29■□□□□ 0.84
RPUSD3-204ENST00000424438 ADM5C9JUS6 153 aa20.29■□□□□ 0.84
RPUSD3-204ENST00000424438 HDGFL1Q5TGJ6 251 aa20.29■□□□□ 0.84
RPUSD3-204ENST00000424438 ZC3H12CQ9C0D7 883 aaKnown RBP20.29■□□□□ 0.84
RPUSD3-204ENST00000424438 HPS5Q9UPZ3 1129 aa20.29■□□□□ 0.84
RPUSD3-204ENST00000424438 PKN2Q16513 984 aaKnown RBP20.28■□□□□ 0.84
RPUSD3-204ENST00000424438 CSRNP1Q96S65 589 aa20.28■□□□□ 0.84
RPUSD3-204ENST00000424438 GGA3Q9NZ52 723 aa20.28■□□□□ 0.84
RPUSD3-204ENST00000424438 IRS4O14654 1257 aaPredicted RBP20.27■□□□□ 0.84
RPUSD3-204ENST00000424438 RIMBP2O15034 1052 aa20.27■□□□□ 0.84
RPUSD3-204ENST00000424438 DLK2Q6UY11 383 aa20.27■□□□□ 0.84
RPUSD3-204ENST00000424438 HDAC9Q9UKV0 1011 aa20.27■□□□□ 0.84
RPUSD3-204ENST00000424438 NOM1Q5C9Z4 860 aaKnown RBP20.26■□□□□ 0.83
RPUSD3-204ENST00000424438 ZBTB38Q8NAP3 1195 aaPredicted RBP20.26■□□□□ 0.83
RPUSD3-204ENST00000424438 CDCA5Q96FF9 252 aa20.26■□□□□ 0.83
RPUSD3-204ENST00000424438 KCNQ5Q9NR82 932 aa20.26■□□□□ 0.83
RPUSD3-204ENST00000424438 DOK7Q18PE1 504 aa20.25■□□□□ 0.83
RPUSD3-204ENST00000424438 KRT24Q2M2I5 525 aa20.25■□□□□ 0.83
RPUSD3-204ENST00000424438 RSBN1LQ6PCB5 846 aaPredicted RBP20.25■□□□□ 0.83
RPUSD3-204ENST00000424438 GMLQ99445 158 aa20.25■□□□□ 0.83
RPUSD3-204ENST00000424438 TRIM35Q9UPQ4 493 aa20.25■□□□□ 0.83
RPUSD3-204ENST00000424438 ATP5J2-PTCD1G3V325 749 aa20.24■□□□□ 0.83
RPUSD3-204ENST00000424438 RBM26Q5T8P6 1007 aaKnown RBP20.24■□□□□ 0.83
RPUSD3-204ENST00000424438 RASAL3Q86YV0 1011 aa20.24■□□□□ 0.83
RPUSD3-204ENST00000424438 GGA1Q9UJY5 639 aa20.24■□□□□ 0.83
RPUSD3-204ENST00000424438 MMP14P50281 582 aa20.23■□□□□ 0.83
RPUSD3-204ENST00000424438 UFL1O94874 794 aa20.22■□□□□ 0.83
RPUSD3-204ENST00000424438 CCDC152Q4G0S7 254 aa20.22■□□□□ 0.83
RPUSD3-204ENST00000424438 PODNQ7Z5L7 613 aa20.22■□□□□ 0.83
RPUSD3-204ENST00000424438 CCDC191Q8NCU4 936 aa20.22■□□□□ 0.83
RPUSD3-204ENST00000424438 RUNDC1Q96C34 613 aa20.22■□□□□ 0.83
RPUSD3-204ENST00000424438 PCCAP05165 728 aaPredicted RBP20.21■□□□□ 0.83
RPUSD3-204ENST00000424438 SCARF1Q14162 830 aa20.21■□□□□ 0.83
RPUSD3-204ENST00000424438 HABP4Q5JVS0 413 aaKnown RBP20.21■□□□□ 0.83
RPUSD3-204ENST00000424438 ANGEL2Q5VTE6 544 aaKnown RBP20.21■□□□□ 0.83
RPUSD3-204ENST00000424438 ANKIB1Q9P2G1 1089 aa20.21■□□□□ 0.83
RPUSD3-204ENST00000424438 XDHP47989 1333 aa20.21■□□□□ 0.83
RPUSD3-204ENST00000424438 G3V3G9 751 aa20.2■□□□□ 0.82
RPUSD3-204ENST00000424438 USP17L8P0C7I0 530 aa20.2■□□□□ 0.82
RPUSD3-204ENST00000424438 DCAF8Q5TAQ9 597 aa20.2■□□□□ 0.82
RPUSD3-204ENST00000424438 DUSP27Q5VZP5 1158 aa20.2■□□□□ 0.82
RPUSD3-204ENST00000424438 ASTN2O75129 1339 aaPredicted RBP20.2■□□□□ 0.82
RPUSD3-204ENST00000424438 ZNF646O15015 1829 aaPredicted RBP20.2■□□□□ 0.82
RPUSD3-204ENST00000424438 PDE8AO60658 829 aa20.19■□□□□ 0.82
RPUSD3-204ENST00000424438 GOLGA2Q08379 1002 aa20.19■□□□□ 0.82
RPUSD3-204ENST00000424438 CFHR5Q9BXR6 569 aa20.19■□□□□ 0.82
RPUSD3-204ENST00000424438 CHMP4AQ9BY43 222 aa20.19■□□□□ 0.82
RPUSD3-204ENST00000424438 MYOZ2Q9NPC6 264 aa20.19■□□□□ 0.82
RPUSD3-204ENST00000424438 SEC31BQ9NQW1 1179 aa20.19■□□□□ 0.82
RPUSD3-204ENST00000424438 MYH3P11055 1940 aa20.18■□□□□ 0.82
RPUSD3-204ENST00000424438 USP17L3A6NCW0 530 aa20.18■□□□□ 0.82
RPUSD3-204ENST00000424438 USP17L4A6NCW7 530 aa20.18■□□□□ 0.82
RPUSD3-204ENST00000424438 ATP2B4P23634 1241 aa20.18■□□□□ 0.82
RPUSD3-204ENST00000424438 USP17L1Q7RTZ2 530 aa20.18■□□□□ 0.82
RPUSD3-204ENST00000424438 MYBBP1AQ9BQG0 1328 aaKnown RBP20.18■□□□□ 0.82
RPUSD3-204ENST00000424438 ZNF853P0CG23 659 aa20.17■□□□□ 0.82
RPUSD3-204ENST00000424438 TM4SF4P48230 202 aa20.17■□□□□ 0.82
RPUSD3-204ENST00000424438 RIC3Q7Z5B4 369 aa20.17■□□□□ 0.82
RPUSD3-204ENST00000424438 MED23Q9ULK4 1368 aa20.17■□□□□ 0.82
RPUSD3-204ENST00000424438 NEUROD2Q15784 382 aa20.16■□□□□ 0.82
RPUSD3-204ENST00000424438 RTL5Q5HYW3 569 aaPredicted RBP20.16■□□□□ 0.82
RPUSD3-204ENST00000424438 ZNF296Q8WUU4 475 aaPredicted RBP20.16■□□□□ 0.82
RPUSD3-204ENST00000424438 LAS1LQ9Y4W2 734 aaKnown RBP20.16■□□□□ 0.82
RPUSD3-204ENST00000424438 MYO3BQ8WXR4 1341 aa20.16■□□□□ 0.82
RPUSD3-204ENST00000424438 FBXO46Q6PJ61 603 aaPredicted RBP20.15■□□□□ 0.82
RPUSD3-204ENST00000424438 ANKRD18AQ8IVF6 992 aa20.15■□□□□ 0.82
RPUSD3-204ENST00000424438 MBIPQ9NS73 344 aa20.15■□□□□ 0.82
RPUSD3-204ENST00000424438 CWC25Q9NXE8 425 aaPredicted RBP20.15■□□□□ 0.82
RPUSD3-204ENST00000424438 LAMB1P07942 1786 aa20.15■□□□□ 0.82
RPUSD3-204ENST00000424438 ZNF428Q96B54 188 aa20.14■□□□□ 0.81
RPUSD3-204ENST00000424438 CDC5LQ99459 802 aaKnown RBP20.14■□□□□ 0.81
RPUSD3-204ENST00000424438 CALD1Q05682 793 aaKnown RBP20.13■□□□□ 0.81
RPUSD3-204ENST00000424438 CCDC146Q8IYE0 955 aa20.13■□□□□ 0.81
RPUSD3-204ENST00000424438 METTL22Q9BUU2 404 aaPredicted RBP20.13■□□□□ 0.81
RPUSD3-204ENST00000424438 IFT57Q9NWB7 429 aa20.13■□□□□ 0.81
RPUSD3-204ENST00000424438 TBC1D8O95759 1140 aa20.12■□□□□ 0.81
RPUSD3-204ENST00000424438 NF2P35240 595 aa20.12■□□□□ 0.81
RPUSD3-204ENST00000424438 WDR43Q15061 677 aaKnown RBP eCLIP20.12■□□□□ 0.81
RPUSD3-204ENST00000424438 DACT2Q5SW24 774 aa20.12■□□□□ 0.81
RPUSD3-204ENST00000424438 STRIP1Q5VSL9 837 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms