RNA–Protein interactions for RNA: ENST00000424415.1

FAM239B-202, Transcript of family with sequence similarity 239 member B, humanhuman

TSL 2 BASIC

Gene FAM239B, Length 2,194 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239B-202ENST00000424415 TERF1P54274 439 aa12.39□□□□□ -0.43
FAM239B-202ENST00000424415 HMGN5P82970 282 aaKnown RBP12.39□□□□□ -0.43
FAM239B-202ENST00000424415 TCIRG1Q13488 830 aa12.39□□□□□ -0.43
FAM239B-202ENST00000424415 TTLL7Q6ZT98 887 aa12.39□□□□□ -0.43
FAM239B-202ENST00000424415 GDPD2Q9HCC8 539 aa12.39□□□□□ -0.43
FAM239B-202ENST00000424415 XIRP1Q702N8 1843 aaKnown RBP12.38□□□□□ -0.43
FAM239B-202ENST00000424415 PCCAP05165 728 aaPredicted RBP12.38□□□□□ -0.43
FAM239B-202ENST00000424415 PIP4K2AP48426 406 aaPredicted RBP12.38□□□□□ -0.43
FAM239B-202ENST00000424415 CCDC158Q5M9N0 1113 aa12.38□□□□□ -0.43
FAM239B-202ENST00000424415 ZMYM1Q5SVZ6 1142 aa12.38□□□□□ -0.43
FAM239B-202ENST00000424415 CHAMP1Q96JM3 812 aa12.38□□□□□ -0.43
FAM239B-202ENST00000424415 NEUROD6Q96NK8 337 aa12.38□□□□□ -0.43
FAM239B-202ENST00000424415 CTNNA3Q9UI47 895 aa12.38□□□□□ -0.43
FAM239B-202ENST00000424415 IFIT1P09914 478 aaKnown RBP12.37□□□□□ -0.43
FAM239B-202ENST00000424415 DNM1Q05193 864 aaKnown RBP12.37□□□□□ -0.43
FAM239B-202ENST00000424415 ST3GAL1Q11201 340 aa12.37□□□□□ -0.43
FAM239B-202ENST00000424415 ATL3Q6DD88 541 aa12.37□□□□□ -0.43
FAM239B-202ENST00000424415 DHX32Q7L7V1 743 aaKnown RBP12.37□□□□□ -0.43
FAM239B-202ENST00000424415 FBXL16Q8N461 479 aa12.37□□□□□ -0.43
FAM239B-202ENST00000424415 ZKSCAN5Q9Y2L8 839 aa12.37□□□□□ -0.43
FAM239B-202ENST00000424415 TJP1Q07157 1748 aa12.37□□□□□ -0.43
FAM239B-202ENST00000424415 ABCA3Q99758 1704 aa12.37□□□□□ -0.43
FAM239B-202ENST00000424415 GOLGA6L4A6NEF3 574 aa12.37□□□□□ -0.43
FAM239B-202ENST00000424415 RNF113AO15541 343 aaKnown RBP12.37□□□□□ -0.43
FAM239B-202ENST00000424415 A1BGP04217 495 aa12.37□□□□□ -0.43
FAM239B-202ENST00000424415 FGD1P98174 961 aa12.37□□□□□ -0.43
FAM239B-202ENST00000424415 FOXD4L6Q3SYB3 417 aaPredicted RBP12.37□□□□□ -0.43
FAM239B-202ENST00000424415 FOXD4L3Q6VB84 417 aaPredicted RBP12.37□□□□□ -0.43
FAM239B-202ENST00000424415 NECAB1Q8N987 351 aa12.37□□□□□ -0.43
FAM239B-202ENST00000424415 NAP1L5Q96NT1 182 aaPredicted RBP12.37□□□□□ -0.43
FAM239B-202ENST00000424415 LARP6Q9BRS8 491 aaKnown RBP12.37□□□□□ -0.43
FAM239B-202ENST00000424415 CDHR2Q9BYE9 1310 aa12.36□□□□□ -0.43
FAM239B-202ENST00000424415 CCDC192P0DO97 292 aa12.36□□□□□ -0.43
FAM239B-202ENST00000424415 DDX46Q7L014 1031 aaKnown RBP12.36□□□□□ -0.43
FAM239B-202ENST00000424415 ZBTB38Q8NAP3 1195 aaPredicted RBP12.36□□□□□ -0.43
FAM239B-202ENST00000424415 DDX54Q8TDD1 881 aaKnown RBP12.36□□□□□ -0.43
FAM239B-202ENST00000424415 ZBTB3Q9H5J0 574 aa12.36□□□□□ -0.43
FAM239B-202ENST00000424415 CFAP45Q9UL16 551 aa12.36□□□□□ -0.43
FAM239B-202ENST00000424415 A0A1B0GUL7 405 aa12.36□□□□□ -0.43
FAM239B-202ENST00000424415 GOLIM4O00461 696 aa12.36□□□□□ -0.43
FAM239B-202ENST00000424415 TPM3P06753 285 aa12.36□□□□□ -0.43
FAM239B-202ENST00000424415 TPM2P07951 284 aa12.36□□□□□ -0.43
FAM239B-202ENST00000424415 CYP21A2P08686 494 aa12.36□□□□□ -0.43
FAM239B-202ENST00000424415 HSP90B1P14625 803 aaKnown RBP12.36□□□□□ -0.43
FAM239B-202ENST00000424415 DDX19AQ9NUU7 478 aaKnown RBP12.36□□□□□ -0.43
FAM239B-202ENST00000424415 PFKFB2O60825 505 aa12.35□□□□□ -0.43
FAM239B-202ENST00000424415 OFD1O75665 1012 aa12.35□□□□□ -0.43
FAM239B-202ENST00000424415 CAVIN2O95810 425 aa12.35□□□□□ -0.43
FAM239B-202ENST00000424415 GORABQ5T7V8 394 aa12.35□□□□□ -0.43
FAM239B-202ENST00000424415 NAA16Q6N069 864 aaPredicted RBP12.35□□□□□ -0.43
FAM239B-202ENST00000424415 Q6ZUG5 572 aa12.35□□□□□ -0.43
FAM239B-202ENST00000424415 RGS22Q8NE09 1264 aa12.35□□□□□ -0.43
FAM239B-202ENST00000424415 JARID2Q92833 1246 aaPredicted RBP12.35□□□□□ -0.43
FAM239B-202ENST00000424415 EDC3Q96F86 508 aaKnown RBP12.35□□□□□ -0.43
FAM239B-202ENST00000424415 AGXT2Q9BYV1 514 aa12.35□□□□□ -0.43
FAM239B-202ENST00000424415 H3BQV1 296 aa12.35□□□□□ -0.43
FAM239B-202ENST00000424415 PTMAP06454 111 aaKnown RBP12.35□□□□□ -0.43
FAM239B-202ENST00000424415 IFIT5Q13325 482 aaKnown RBP12.35□□□□□ -0.43
FAM239B-202ENST00000424415 TAF7LQ5H9L4 462 aa12.35□□□□□ -0.43
FAM239B-202ENST00000424415 IFFO2Q5TF58 517 aa12.35□□□□□ -0.43
FAM239B-202ENST00000424415 ZSCAN25Q6NSZ9 544 aa12.35□□□□□ -0.43
FAM239B-202ENST00000424415 RNF214Q8ND24 703 aa12.35□□□□□ -0.43
FAM239B-202ENST00000424415 ZNF274Q96GC6 653 aaPredicted RBP12.35□□□□□ -0.43
FAM239B-202ENST00000424415 LRP6O75581 1613 aa12.35□□□□□ -0.43
FAM239B-202ENST00000424415 SHANK3Q9BYB0 1731 aa12.34□□□□□ -0.43
FAM239B-202ENST00000424415 NHSL1Q5SYE7 1610 aa12.34□□□□□ -0.43
FAM239B-202ENST00000424415 CSF1RP07333 972 aa12.34□□□□□ -0.43
FAM239B-202ENST00000424415 TTC39AQ5SRH9 613 aa12.34□□□□□ -0.43
FAM239B-202ENST00000424415 SMARCC2Q8TAQ2 1214 aa12.34□□□□□ -0.43
FAM239B-202ENST00000424415 ZNF512BQ96KM6 892 aaPredicted RBP12.34□□□□□ -0.43
FAM239B-202ENST00000424415 MAP3K15Q6ZN16 1313 aa12.34□□□□□ -0.43
FAM239B-202ENST00000424415 DHX16O60231 1041 aaKnown RBP12.33□□□□□ -0.44
FAM239B-202ENST00000424415 HSPA2P54652 639 aa12.33□□□□□ -0.44
FAM239B-202ENST00000424415 MAP3K11Q16584 847 aa12.33□□□□□ -0.44
FAM239B-202ENST00000424415 CDC37L1Q7L3B6 337 aa12.33□□□□□ -0.44
FAM239B-202ENST00000424415 SPATA32Q96LK8 384 aa12.33□□□□□ -0.44
FAM239B-202ENST00000424415 AK7Q96M32 723 aa12.33□□□□□ -0.44
FAM239B-202ENST00000424415 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.33□□□□□ -0.44
FAM239B-202ENST00000424415 NUP62CLQ9H1M0 184 aa12.33□□□□□ -0.44
FAM239B-202ENST00000424415 STRN4Q9NRL3 753 aa12.33□□□□□ -0.44
FAM239B-202ENST00000424415 WDR19Q8NEZ3 1342 aa12.33□□□□□ -0.44
FAM239B-202ENST00000424415 TIMM10P62072 90 aa12.33□□□□□ -0.44
FAM239B-202ENST00000424415 EXOSC10Q01780 885 aaKnown RBP12.33□□□□□ -0.44
FAM239B-202ENST00000424415 TTF1Q15361 905 aaPredicted RBP12.33□□□□□ -0.44
FAM239B-202ENST00000424415 GIGYF2Q6Y7W6 1299 aaKnown RBP12.33□□□□□ -0.44
FAM239B-202ENST00000424415 FUCA2Q9BTY2 467 aa12.33□□□□□ -0.44
FAM239B-202ENST00000424415 HSPD1P10809 573 aaKnown RBP12.32□□□□□ -0.44
FAM239B-202ENST00000424415 IMMTQ16891 758 aaKnown RBP12.32□□□□□ -0.44
FAM239B-202ENST00000424415 BRF1Q92994 677 aa12.32□□□□□ -0.44
FAM239B-202ENST00000424415 KDM4AO75164 1064 aa12.32□□□□□ -0.44
FAM239B-202ENST00000424415 EVCP57679 992 aa12.32□□□□□ -0.44
FAM239B-202ENST00000424415 LRRC24Q50LG9 513 aa12.32□□□□□ -0.44
FAM239B-202ENST00000424415 CCDC129Q6ZRS4 1044 aa12.32□□□□□ -0.44
FAM239B-202ENST00000424415 TTC6Q86TZ1 520 aa12.32□□□□□ -0.44
FAM239B-202ENST00000424415 MAST3O60307 1309 aa12.31□□□□□ -0.44
FAM239B-202ENST00000424415 GOLGA6L6A8MZA4 724 aa12.31□□□□□ -0.44
FAM239B-202ENST00000424415 ERVV-1B6SEH8 477 aa12.31□□□□□ -0.44
FAM239B-202ENST00000424415 KIAA2012Q0VF49 1180 aa12.31□□□□□ -0.44
FAM239B-202ENST00000424415 STK3Q13188 491 aa12.31□□□□□ -0.44
FAM239B-202ENST00000424415 LEO1Q8WVC0 666 aaPredicted RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms