RNA–Protein interactions for RNA: ENST00000422770.5

HERC3-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-204ENST00000422770 RTL9Q8NET4 1388 aa12.16□□□□□ -0.46
HERC3-204ENST00000422770 SCN4AP35499 1836 aa12.16□□□□□ -0.46
HERC3-204ENST00000422770 XDHP47989 1333 aa12.15□□□□□ -0.46
HERC3-204ENST00000422770 UBTFL1P0CB47 393 aaPredicted RBP12.15□□□□□ -0.46
HERC3-204ENST00000422770 KCNJ4P48050 445 aa12.15□□□□□ -0.46
HERC3-204ENST00000422770 EPHA10Q5JZY3 1008 aa12.15□□□□□ -0.46
HERC3-204ENST00000422770 PLIN1O60240 522 aa12.14□□□□□ -0.47
HERC3-204ENST00000422770 VEGFAP15692 232 aaPredicted RBP12.14□□□□□ -0.47
HERC3-204ENST00000422770 KIAA2012Q0VF49 1180 aa12.14□□□□□ -0.47
HERC3-204ENST00000422770 DOK7Q18PE1 504 aa12.14□□□□□ -0.47
HERC3-204ENST00000422770 ZKSCAN2Q63HK3 967 aa12.14□□□□□ -0.47
HERC3-204ENST00000422770 FTSJ3Q8IY81 847 aaKnown RBP12.14□□□□□ -0.47
HERC3-204ENST00000422770 TBC1D16Q8TBP0 767 aa12.14□□□□□ -0.47
HERC3-204ENST00000422770 ZNF594Q96JF6 807 aaPredicted RBP12.14□□□□□ -0.47
HERC3-204ENST00000422770 RTFDC1Q9BY42 306 aaPredicted RBP12.14□□□□□ -0.47
HERC3-204ENST00000422770 BICC1Q9H694 974 aaKnown RBP12.14□□□□□ -0.47
HERC3-204ENST00000422770 DBNDD1Q9H9R9 158 aa12.14□□□□□ -0.47
HERC3-204ENST00000422770 CNNM1Q9NRU3 951 aa12.14□□□□□ -0.47
HERC3-204ENST00000422770 BSDC1Q9NW68 430 aaPredicted RBP12.14□□□□□ -0.47
HERC3-204ENST00000422770 POLLQ9UGP5 575 aa12.14□□□□□ -0.47
HERC3-204ENST00000422770 TNNQ9UQP3 1299 aa12.14□□□□□ -0.47
HERC3-204ENST00000422770 KIF3CO14782 793 aa12.13□□□□□ -0.47
HERC3-204ENST00000422770 CSF1RP07333 972 aa12.13□□□□□ -0.47
HERC3-204ENST00000422770 TRIM27P14373 513 aa12.13□□□□□ -0.47
HERC3-204ENST00000422770 LMOD1P29536 600 aaPredicted RBP12.13□□□□□ -0.47
HERC3-204ENST00000422770 BRPF1P55201 1214 aaPredicted RBP12.13□□□□□ -0.47
HERC3-204ENST00000422770 ATF7IPQ6VMQ6 1270 aa12.13□□□□□ -0.47
HERC3-204ENST00000422770 ZC3H12CQ9C0D7 883 aaKnown RBP12.13□□□□□ -0.47
HERC3-204ENST00000422770 RCAN3Q9UKA8 241 aa12.13□□□□□ -0.47
HERC3-204ENST00000422770 FZD9O00144 591 aa12.12□□□□□ -0.47
HERC3-204ENST00000422770 ECE2O60344 883 aa12.12□□□□□ -0.47
HERC3-204ENST00000422770 RAD17O75943 681 aa12.12□□□□□ -0.47
HERC3-204ENST00000422770 ATP2B4P23634 1241 aa12.12□□□□□ -0.47
HERC3-204ENST00000422770 EAPPQ56P03 285 aaPredicted RBP12.12□□□□□ -0.47
HERC3-204ENST00000422770 LDHAL6AQ6ZMR3 332 aa12.12□□□□□ -0.47
HERC3-204ENST00000422770 HELBQ8NG08 1087 aaPredicted RBP12.12□□□□□ -0.47
HERC3-204ENST00000422770 ARHGAP45Q92619 1136 aa12.12□□□□□ -0.47
HERC3-204ENST00000422770 FBXW7Q969H0 707 aa12.12□□□□□ -0.47
HERC3-204ENST00000422770 ANKRD2Q9GZV1 360 aa12.12□□□□□ -0.47
HERC3-204ENST00000422770 USP44Q9H0E7 712 aa12.12□□□□□ -0.47
HERC3-204ENST00000422770 VPS33BQ9H267 617 aa12.12□□□□□ -0.47
HERC3-204ENST00000422770 ZNRF3Q9ULT6 936 aa12.12□□□□□ -0.47
HERC3-204ENST00000422770 MINPP1Q9UNW1 487 aa12.12□□□□□ -0.47
HERC3-204ENST00000422770 UTYO14607 1347 aa12.11□□□□□ -0.47
HERC3-204ENST00000422770 PSME4Q14997 1843 aa12.11□□□□□ -0.47
HERC3-204ENST00000422770 SCN9AQ15858 1988 aa12.11□□□□□ -0.47
HERC3-204ENST00000422770 IQCA1LA6NCM1 817 aa12.11□□□□□ -0.47
HERC3-204ENST00000422770 TAF5LO75529 589 aa12.11□□□□□ -0.47
HERC3-204ENST00000422770 TOMM70O94826 608 aa12.11□□□□□ -0.47
HERC3-204ENST00000422770 CHRNDQ07001 517 aa12.11□□□□□ -0.47
HERC3-204ENST00000422770 CIAPIN1Q6FI81 312 aa12.11□□□□□ -0.47
HERC3-204ENST00000422770 ITPRIPQ8IWB1 547 aa12.11□□□□□ -0.47
HERC3-204ENST00000422770 GPC2Q8N158 579 aa12.11□□□□□ -0.47
HERC3-204ENST00000422770 MEIS3Q99687 375 aa12.11□□□□□ -0.47
HERC3-204ENST00000422770 PODXL2Q9NZ53 605 aa12.11□□□□□ -0.47
HERC3-204ENST00000422770 HACL1Q9UJ83 578 aa12.11□□□□□ -0.47
HERC3-204ENST00000422770 LRRFIP2Q9Y608 721 aaKnown RBP12.11□□□□□ -0.47
HERC3-204ENST00000422770 CXCL9Q07325 125 aa12.1□□□□□ -0.47
HERC3-204ENST00000422770 ANKRD44Q8N8A2 993 aa12.1□□□□□ -0.47
HERC3-204ENST00000422770 KAZALD1Q96I82 304 aa12.1□□□□□ -0.47
HERC3-204ENST00000422770 HDAC5Q9UQL6 1122 aa12.1□□□□□ -0.47
HERC3-204ENST00000422770 CLEC11AQ9Y240 323 aa12.1□□□□□ -0.47
HERC3-204ENST00000422770 MYH13Q9UKX3 1938 aa12.09□□□□□ -0.47
HERC3-204ENST00000422770 YDJCA8MPS7 323 aa12.09□□□□□ -0.47
HERC3-204ENST00000422770 GNAI3P08754 354 aa12.09□□□□□ -0.47
HERC3-204ENST00000422770 TNIP1Q15025 636 aa12.09□□□□□ -0.47
HERC3-204ENST00000422770 INTS3Q68E01 1043 aaKnown RBP12.09□□□□□ -0.47
HERC3-204ENST00000422770 DZIP1LQ8IYY4 767 aaKnown RBP12.09□□□□□ -0.47
HERC3-204ENST00000422770 TMEM57Q8N5G2 664 aa12.09□□□□□ -0.47
HERC3-204ENST00000422770 KLHDC4Q8TBB5 520 aa12.09□□□□□ -0.47
HERC3-204ENST00000422770 ZNF804BA4D1E1 1349 aa12.09□□□□□ -0.47
HERC3-204ENST00000422770 MED23Q9ULK4 1368 aa12.08□□□□□ -0.48
HERC3-204ENST00000422770 WTIPA6NIX2 430 aaPredicted RBP12.08□□□□□ -0.48
HERC3-204ENST00000422770 PSMD14O00487 310 aa12.08□□□□□ -0.48
HERC3-204ENST00000422770 EPHX2P34913 555 aa12.08□□□□□ -0.48
HERC3-204ENST00000422770 GMPSP49915 693 aaPredicted RBP12.08□□□□□ -0.48
HERC3-204ENST00000422770 RRP1P56182 461 aaKnown RBP12.08□□□□□ -0.48
HERC3-204ENST00000422770 METTL24Q5JXM2 366 aa12.08□□□□□ -0.48
HERC3-204ENST00000422770 SMC1BQ8NDV3 1235 aa12.08□□□□□ -0.48
HERC3-204ENST00000422770 RBM46Q8TBY0 533 aaKnown RBP12.08□□□□□ -0.48
HERC3-204ENST00000422770 L3MBTL3Q96JM7 780 aaPredicted RBP12.08□□□□□ -0.48
HERC3-204ENST00000422770 PUS3Q9BZE2 481 aaKnown RBP12.08□□□□□ -0.48
HERC3-204ENST00000422770 SIL1Q9H173 461 aa12.08□□□□□ -0.48
HERC3-204ENST00000422770 LEMD3Q9Y2U8 911 aa12.08□□□□□ -0.48
HERC3-204ENST00000422770 SUPT16HQ9Y5B9 1047 aaKnown RBP12.08□□□□□ -0.48
HERC3-204ENST00000422770 POTECB2RU33 542 aa12.07□□□□□ -0.48
HERC3-204ENST00000422770 SNAP23O00161 211 aa12.07□□□□□ -0.48
HERC3-204ENST00000422770 NEFLP07196 543 aa12.07□□□□□ -0.48
HERC3-204ENST00000422770 HSPA6P17066 643 aa12.07□□□□□ -0.48
HERC3-204ENST00000422770 KLRK1P26718 216 aa12.07□□□□□ -0.48
HERC3-204ENST00000422770 RABL6Q3YEC7 729 aaPredicted RBP12.07□□□□□ -0.48
HERC3-204ENST00000422770 TAF1DQ9H5J8 278 aaPredicted RBP12.07□□□□□ -0.48
HERC3-204ENST00000422770 KCNQ5Q9NR82 932 aa12.07□□□□□ -0.48
HERC3-204ENST00000422770 CEP350Q5VT06 3117 aa12.06□□□□□ -0.48
HERC3-204ENST00000422770 POTEIP0CG38 1075 aa12.06□□□□□ -0.48
HERC3-204ENST00000422770 POTEJP0CG39 1038 aa12.06□□□□□ -0.48
HERC3-204ENST00000422770 EPS15P42566 896 aa12.06□□□□□ -0.48
HERC3-204ENST00000422770 LRRC24Q50LG9 513 aa12.06□□□□□ -0.48
HERC3-204ENST00000422770 PANK1Q8TE04 598 aa12.06□□□□□ -0.48
HERC3-204ENST00000422770 ZBTB12Q9Y330 459 aaPredicted RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms