RNA–Protein interactions for RNA: ENST00000422379.2

HPS4-204, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 1,942 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-204ENST00000422379 PARP3Q9Y6F1 533 aa11.04□□□□□ -0.64
HPS4-204ENST00000422379 NPHP1O15259 732 aa11.03□□□□□ -0.64
HPS4-204ENST00000422379 PDE1AP54750 535 aa11.03□□□□□ -0.64
HPS4-204ENST00000422379 TNNI3KQ59H18 835 aa11.03□□□□□ -0.64
HPS4-204ENST00000422379 TAF7LQ5H9L4 462 aa11.03□□□□□ -0.64
HPS4-204ENST00000422379 DBNLQ9UJU6 430 aaKnown RBP11.03□□□□□ -0.64
HPS4-204ENST00000422379 FPGT-TNNI3KV9GXZ4 949 aa11.03□□□□□ -0.64
HPS4-204ENST00000422379 ZNF609O15014 1411 aa11.03□□□□□ -0.64
HPS4-204ENST00000422379 TIMM10P62072 90 aa11.03□□□□□ -0.64
HPS4-204ENST00000422379 ST5P78524 1137 aa11.03□□□□□ -0.64
HPS4-204ENST00000422379 AACSQ86V21 672 aa11.03□□□□□ -0.64
HPS4-204ENST00000422379 ERC1Q8IUD2 1116 aa11.03□□□□□ -0.64
HPS4-204ENST00000422379 BRIP1Q9BX63 1249 aa11.03□□□□□ -0.64
HPS4-204ENST00000422379 ATF5Q9Y2D1 282 aaPredicted RBP11.03□□□□□ -0.64
HPS4-204ENST00000422379 TAF5LO75529 589 aa11.02□□□□□ -0.65
HPS4-204ENST00000422379 HSP90B1P14625 803 aaKnown RBP11.02□□□□□ -0.65
HPS4-204ENST00000422379 MX1P20591 662 aa11.02□□□□□ -0.65
HPS4-204ENST00000422379 ADORA1P30542 326 aa11.02□□□□□ -0.65
HPS4-204ENST00000422379 PI4K2BQ8TCG2 481 aa11.02□□□□□ -0.65
HPS4-204ENST00000422379 IPO9Q96P70 1041 aaKnown RBP11.02□□□□□ -0.65
HPS4-204ENST00000422379 DBNDD2Q9BQY9 259 aa11.02□□□□□ -0.65
HPS4-204ENST00000422379 CNNM1Q9NRU3 951 aa11.02□□□□□ -0.65
HPS4-204ENST00000422379 STAP2Q9UGK3 403 aa11.02□□□□□ -0.65
HPS4-204ENST00000422379 SRGNP10124 158 aa11.01□□□□□ -0.65
HPS4-204ENST00000422379 CLASRPQ8N2M8 674 aaKnown RBP11.01□□□□□ -0.65
HPS4-204ENST00000422379 SLC16A10Q8TF71 515 aa11.01□□□□□ -0.65
HPS4-204ENST00000422379 SGIP1Q9BQI5 828 aa11.01□□□□□ -0.65
HPS4-204ENST00000422379 OSBPL3Q9H4L5 887 aa11.01□□□□□ -0.65
HPS4-204ENST00000422379 FBXO3Q9UK99 471 aa11.01□□□□□ -0.65
HPS4-204ENST00000422379 C10orf71Q711Q0 1435 aa11.01□□□□□ -0.65
HPS4-204ENST00000422379 A0A1B0GUL6 1792 aa11.01□□□□□ -0.65
HPS4-204ENST00000422379 CHRNA5P30532 468 aa11.01□□□□□ -0.65
HPS4-204ENST00000422379 HOXA10P31260 410 aaPredicted RBP11.01□□□□□ -0.65
HPS4-204ENST00000422379 RPS8P62241 208 aaKnown RBP11.01□□□□□ -0.65
HPS4-204ENST00000422379 CHRNDQ07001 517 aa11.01□□□□□ -0.65
HPS4-204ENST00000422379 METTL24Q5JXM2 366 aa11.01□□□□□ -0.65
HPS4-204ENST00000422379 ANKRD18AQ8IVF6 992 aa11.01□□□□□ -0.65
HPS4-204ENST00000422379 CDC5LQ99459 802 aaKnown RBP11.01□□□□□ -0.65
HPS4-204ENST00000422379 BSDC1Q9NW68 430 aaPredicted RBP11.01□□□□□ -0.65
HPS4-204ENST00000422379 MINPP1Q9UNW1 487 aa11.01□□□□□ -0.65
HPS4-204ENST00000422379 A0A1B0GUL7 405 aa11□□□□□ -0.65
HPS4-204ENST00000422379 PDE8BO95263 885 aa11□□□□□ -0.65
HPS4-204ENST00000422379 FGFR2P21802 821 aa11□□□□□ -0.65
HPS4-204ENST00000422379 GRAPQ13588 217 aa11□□□□□ -0.65
HPS4-204ENST00000422379 TTC22Q5TAA0 569 aa11□□□□□ -0.65
HPS4-204ENST00000422379 OLFM4Q6UX06 510 aa11□□□□□ -0.65
HPS4-204ENST00000422379 DDX46Q7L014 1031 aaKnown RBP11□□□□□ -0.65
HPS4-204ENST00000422379 GRAPLQ8TC17 118 aaPredicted RBP11□□□□□ -0.65
HPS4-204ENST00000422379 MPHOSPH8Q99549 860 aa11□□□□□ -0.65
HPS4-204ENST00000422379 CEP126Q9P2H0 1117 aa11□□□□□ -0.65
HPS4-204ENST00000422379 KLRK1P26718 216 aa10.99□□□□□ -0.65
HPS4-204ENST00000422379 IGHMBP2P38935 993 aaKnown RBP10.99□□□□□ -0.65
HPS4-204ENST00000422379 PTGER2P43116 358 aa10.99□□□□□ -0.65
HPS4-204ENST00000422379 GPR108Q9NPR9 543 aa10.99□□□□□ -0.65
HPS4-204ENST00000422379 NDUFB9Q9Y6M9 179 aa10.99□□□□□ -0.65
HPS4-204ENST00000422379 MAP4K4O95819 1239 aaPredicted RBP10.99□□□□□ -0.65
HPS4-204ENST00000422379 IFIT2P09913 472 aaKnown RBP10.99□□□□□ -0.65
HPS4-204ENST00000422379 RPGRQ92834 1020 aaKnown RBP10.99□□□□□ -0.65
HPS4-204ENST00000422379 MTFR1LQ9H019 292 aa10.99□□□□□ -0.65
HPS4-204ENST00000422379 ZBTB47Q9UFB7 747 aaPredicted RBP10.99□□□□□ -0.65
HPS4-204ENST00000422379 MROH5Q6ZUA9 1318 aa10.99□□□□□ -0.65
HPS4-204ENST00000422379 SDSP20132 328 aa10.98□□□□□ -0.65
HPS4-204ENST00000422379 SCARF1Q14162 830 aa10.98□□□□□ -0.65
HPS4-204ENST00000422379 ATP2B3Q16720 1220 aa10.98□□□□□ -0.65
HPS4-204ENST00000422379 BMP2KLQ5H9B9 411 aa10.98□□□□□ -0.65
HPS4-204ENST00000422379 EDC3Q96F86 508 aaKnown RBP10.98□□□□□ -0.65
HPS4-204ENST00000422379 XAGE2Q96GT9 111 aa10.98□□□□□ -0.65
HPS4-204ENST00000422379 NEUROD6Q96NK8 337 aa10.98□□□□□ -0.65
HPS4-204ENST00000422379 IRS2Q9Y4H2 1338 aa10.98□□□□□ -0.65
HPS4-204ENST00000422379 KCNA3P22001 575 aa10.97□□□□□ -0.65
HPS4-204ENST00000422379 ERICH6Q7L0X2 663 aa10.97□□□□□ -0.65
HPS4-204ENST00000422379 C2CD5Q86YS7 1000 aa10.97□□□□□ -0.65
HPS4-204ENST00000422379 CRAMP1Q96RY5 1269 aa10.97□□□□□ -0.65
HPS4-204ENST00000422379 ECHDC1Q9NTX5 307 aa10.97□□□□□ -0.65
HPS4-204ENST00000422379 KIAA1551Q9HCM1 1747 aa10.97□□□□□ -0.65
HPS4-204ENST00000422379 SEC24BO95487 1268 aa10.97□□□□□ -0.65
HPS4-204ENST00000422379 NPR1P16066 1061 aa10.97□□□□□ -0.65
HPS4-204ENST00000422379 PDE6BP35913 854 aa10.97□□□□□ -0.65
HPS4-204ENST00000422379 PUM3Q15397 648 aaKnown RBP10.97□□□□□ -0.65
HPS4-204ENST00000422379 RBM17Q96I25 401 aaKnown RBP10.97□□□□□ -0.65
HPS4-204ENST00000422379 GPR101Q96P66 508 aaPredicted RBP10.97□□□□□ -0.65
HPS4-204ENST00000422379 ANP32EQ9BTT0 268 aa10.97□□□□□ -0.65
HPS4-204ENST00000422379 AOX1Q06278 1338 aa10.96□□□□□ -0.65
HPS4-204ENST00000422379 TTC41PQ6P2S7 1318 aa10.96□□□□□ -0.65
HPS4-204ENST00000422379 GPSM2P81274 684 aa10.96□□□□□ -0.65
HPS4-204ENST00000422379 PI16Q6UXB8 463 aa10.96□□□□□ -0.65
HPS4-204ENST00000422379 TXNRD3Q86VQ6 643 aa10.96□□□□□ -0.65
HPS4-204ENST00000422379 BOLA2Q9H3K6 86 aa10.96□□□□□ -0.65
HPS4-204ENST00000422379 LRRC37AA6NMS7 1700 aa10.96□□□□□ -0.65
HPS4-204ENST00000422379 LTBP1Q14766 1721 aa10.96□□□□□ -0.65
HPS4-204ENST00000422379 ARAP2Q8WZ64 1704 aa10.96□□□□□ -0.66
HPS4-204ENST00000422379 A0A0G2JLW4 131 aa10.96□□□□□ -0.66
HPS4-204ENST00000422379 CHGBP05060 677 aa10.96□□□□□ -0.66
HPS4-204ENST00000422379 PHKA1P46020 1223 aa10.96□□□□□ -0.66
HPS4-204ENST00000422379 LPIN2Q92539 896 aa10.96□□□□□ -0.66
HPS4-204ENST00000422379 MASTLQ96GX5 879 aa10.96□□□□□ -0.66
HPS4-204ENST00000422379 DUOX1Q9NRD9 1551 aa10.95□□□□□ -0.66
HPS4-204ENST00000422379 KIF13BQ9NQT8 1826 aa10.95□□□□□ -0.66
HPS4-204ENST00000422379 PPEF1O14829 653 aaPredicted RBP10.95□□□□□ -0.66
HPS4-204ENST00000422379 DPEP1P16444 411 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms