RNA–Protein interactions for RNA: ENST00000421625.6

USP48-205, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-205ENST00000421625 ZSCAN16Q9H4T2 348 aaPredicted RBP24.95■■□□□ 1.58
USP48-205ENST00000421625 NPHP1O15259 732 aa24.94■■□□□ 1.58
USP48-205ENST00000421625 KSR2Q6VAB6 950 aa24.94■■□□□ 1.58
USP48-205ENST00000421625 ERO1AQ96HE7 468 aa24.94■■□□□ 1.58
USP48-205ENST00000421625 ST7Q9NRC1 585 aa24.94■■□□□ 1.58
USP48-205ENST00000421625 PRAMEF22A3QJZ6 481 aa24.94■■□□□ 1.58
USP48-205ENST00000421625 SNW1Q13573 536 aaKnown RBP24.94■■□□□ 1.58
USP48-205ENST00000421625 MARF1Q9Y4F3 1742 aaKnown RBP24.94■■□□□ 1.58
USP48-205ENST00000421625 TEFQ10587 303 aa24.94■■□□□ 1.58
USP48-205ENST00000421625 SCRN1Q12765 414 aa24.94■■□□□ 1.58
USP48-205ENST00000421625 TAF3Q5VWG9 929 aa24.93■■□□□ 1.58
USP48-205ENST00000421625 MPRIPQ6WCQ1 1025 aa24.93■■□□□ 1.58
USP48-205ENST00000421625 NDUFB9Q9Y6M9 179 aa24.93■■□□□ 1.58
USP48-205ENST00000421625 GRM8O00222 908 aa24.93■■□□□ 1.58
USP48-205ENST00000421625 USPL1Q5W0Q7 1092 aa24.93■■□□□ 1.58
USP48-205ENST00000421625 CCDC129Q6ZRS4 1044 aa24.93■■□□□ 1.58
USP48-205ENST00000421625 AOPEPQ8N6M6 819 aa24.93■■□□□ 1.58
USP48-205ENST00000421625 ABTB2Q8N961 1025 aa24.93■■□□□ 1.58
USP48-205ENST00000421625 FAM53CQ9NYF3 392 aa24.93■■□□□ 1.58
USP48-205ENST00000421625 CTAGE5O15320 804 aa24.92■■□□□ 1.58
USP48-205ENST00000421625 NBPF6Q5VWK0 638 aa24.92■■□□□ 1.58
USP48-205ENST00000421625 NBPF4Q96M43 638 aa24.92■■□□□ 1.58
USP48-205ENST00000421625 RCOR1Q9UKL0 485 aa24.92■■□□□ 1.58
USP48-205ENST00000421625 SLU7O95391 586 aaKnown RBP24.91■■□□□ 1.58
USP48-205ENST00000421625 ZNF446Q9NWS9 450 aa24.91■■□□□ 1.58
USP48-205ENST00000421625 KRT32Q14532 448 aa24.91■■□□□ 1.58
USP48-205ENST00000421625 CCDC73Q6ZRK6 1079 aa24.91■■□□□ 1.58
USP48-205ENST00000421625 USP28Q96RU2 1077 aa24.91■■□□□ 1.58
USP48-205ENST00000421625 PPFIA3O75145 1194 aa24.9■■□□□ 1.58
USP48-205ENST00000421625 SYTL4Q96C24 671 aaPredicted RBP24.9■■□□□ 1.58
USP48-205ENST00000421625 CHMP4AQ9BY43 222 aa24.9■■□□□ 1.58
USP48-205ENST00000421625 NBPF11Q86T75 865 aa24.9■■□□□ 1.58
USP48-205ENST00000421625 SEC62Q99442 399 aaKnown RBP24.9■■□□□ 1.58
USP48-205ENST00000421625 ANO10Q9NW15 660 aa24.9■■□□□ 1.58
USP48-205ENST00000421625 KINO60870 393 aaKnown RBP24.9■■□□□ 1.58
USP48-205ENST00000421625 ADAMTSL3P82987 1691 aa24.89■■□□□ 1.58
USP48-205ENST00000421625 CYP21A2P08686 494 aa24.89■■□□□ 1.58
USP48-205ENST00000421625 ENGASEQ8NFI3 743 aa24.89■■□□□ 1.58
USP48-205ENST00000421625 SMARCC2Q8TAQ2 1214 aa24.89■■□□□ 1.58
USP48-205ENST00000421625 SETD1BQ9UPS6 1966 aaKnown RBP24.89■■□□□ 1.57
USP48-205ENST00000421625 AIMP1Q12904 312 aaKnown RBP24.89■■□□□ 1.57
USP48-205ENST00000421625 LRRN4CLQ8ND94 238 aa24.89■■□□□ 1.57
USP48-205ENST00000421625 NSUN7Q8NE18 718 aaKnown RBP24.88■■□□□ 1.57
USP48-205ENST00000421625 BBXQ8WY36 941 aaPredicted RBP24.88■■□□□ 1.57
USP48-205ENST00000421625 HDAC5Q9UQL6 1122 aa24.88■■□□□ 1.57
USP48-205ENST00000421625 ZBTB22O15209 634 aa24.88■■□□□ 1.57
USP48-205ENST00000421625 ZNF530Q6P9A1 599 aaPredicted RBP24.88■■□□□ 1.57
USP48-205ENST00000421625 FSIP1Q8NA03 581 aa24.88■■□□□ 1.57
USP48-205ENST00000421625 LINS1Q8NG48 757 aa24.88■■□□□ 1.57
USP48-205ENST00000421625 MYH15Q9Y2K3 1946 aa24.88■■□□□ 1.57
USP48-205ENST00000421625 CTDNEP1O95476 244 aa24.87■■□□□ 1.57
USP48-205ENST00000421625 FAM160A1Q05DH4 1040 aa24.87■■□□□ 1.57
USP48-205ENST00000421625 SLFNL1Q499Z3 407 aa24.87■■□□□ 1.57
USP48-205ENST00000421625 CEP57L1Q8IYX8 460 aa24.87■■□□□ 1.57
USP48-205ENST00000421625 E4F1Q66K89 784 aaPredicted RBP24.87■■□□□ 1.57
USP48-205ENST00000421625 ESCO1Q5FWF5 840 aa24.86■■□□□ 1.57
USP48-205ENST00000421625 STOX1Q6ZVD7 989 aa24.86■■□□□ 1.57
USP48-205ENST00000421625 ZNF609O15014 1411 aa24.86■■□□□ 1.57
USP48-205ENST00000421625 GUCY1B3Q02153 619 aa24.86■■□□□ 1.57
USP48-205ENST00000421625 ERCC6LQ2NKX8 1250 aa24.86■■□□□ 1.57
USP48-205ENST00000421625 KCND1Q9NSA2 647 aa24.86■■□□□ 1.57
USP48-205ENST00000421625 PTPDC1A2A3K4 754 aa24.85■■□□□ 1.57
USP48-205ENST00000421625 ERICH4A6NGS2 130 aa24.85■■□□□ 1.57
USP48-205ENST00000421625 ME1P48163 572 aa24.85■■□□□ 1.57
USP48-205ENST00000421625 UTYO14607 1347 aa24.85■■□□□ 1.57
USP48-205ENST00000421625 NAA16Q6N069 864 aaPredicted RBP24.85■■□□□ 1.57
USP48-205ENST00000421625 PFKFB2O60825 505 aa24.85■■□□□ 1.57
USP48-205ENST00000421625 PHF8Q9UPP1 1060 aa24.85■■□□□ 1.57
USP48-205ENST00000421625 GSDMDP57764 484 aa24.84■■□□□ 1.57
USP48-205ENST00000421625 CCT2P78371 535 aaKnown RBP24.84■■□□□ 1.57
USP48-205ENST00000421625 APOBRQ0VD83 1088 aa24.84■■□□□ 1.57
USP48-205ENST00000421625 PPP1R13BQ96KQ4 1090 aa24.84■■□□□ 1.57
USP48-205ENST00000421625 OSBPL5Q9H0X9 879 aaPredicted RBP24.84■■□□□ 1.57
USP48-205ENST00000421625 DBNLQ9UJU6 430 aaKnown RBP24.84■■□□□ 1.57
USP48-205ENST00000421625 AKAP4Q5JQC9 854 aa24.84■■□□□ 1.57
USP48-205ENST00000421625 SYT10Q6XYQ8 523 aa24.84■■□□□ 1.57
USP48-205ENST00000421625 EPHA10Q5JZY3 1008 aa24.83■■□□□ 1.57
USP48-205ENST00000421625 ILDR1Q86SU0 546 aaPredicted RBP24.83■■□□□ 1.57
USP48-205ENST00000421625 LRRC59Q96AG4 307 aaKnown RBP24.83■■□□□ 1.57
USP48-205ENST00000421625 NCOA5Q9HCD5 579 aaKnown RBP24.83■■□□□ 1.57
USP48-205ENST00000421625 U3KPZ7 1027 aaPredicted RBP24.83■■□□□ 1.57
USP48-205ENST00000421625 IGKV5-2P06315 115 aa24.83■■□□□ 1.57
USP48-205ENST00000421625 ARMCX5Q6P1M9 558 aa24.83■■□□□ 1.57
USP48-205ENST00000421625 DNAJC2Q99543 621 aaKnown RBP24.83■■□□□ 1.57
USP48-205ENST00000421625 LLPHQ9BRT6 129 aaKnown RBP24.83■■□□□ 1.57
USP48-205ENST00000421625 L2HGDHQ9H9P8 463 aa24.82■■□□□ 1.56
USP48-205ENST00000421625 KIF2AO00139 706 aaPredicted RBP24.82■■□□□ 1.56
USP48-205ENST00000421625 H2AFXP16104 143 aaPredicted RBP24.82■■□□□ 1.56
USP48-205ENST00000421625 XPO4Q9C0E2 1151 aaKnown RBP24.82■■□□□ 1.56
USP48-205ENST00000421625 LTN1O94822 1766 aa24.82■■□□□ 1.56
USP48-205ENST00000421625 TMC6Q7Z403 805 aa24.81■■□□□ 1.56
USP48-205ENST00000421625 IP6K1Q92551 441 aa24.81■■□□□ 1.56
USP48-205ENST00000421625 TMEM51Q9NW97 253 aa24.81■■□□□ 1.56
USP48-205ENST00000421625 RNMTO43148 476 aaKnown RBP24.81■■□□□ 1.56
USP48-205ENST00000421625 SMC2O95347 1197 aa24.81■■□□□ 1.56
USP48-205ENST00000421625 DPCR1Q3MIW9 517 aa24.81■■□□□ 1.56
USP48-205ENST00000421625 ZNF396Q96N95 335 aaPredicted RBP24.81■■□□□ 1.56
USP48-205ENST00000421625 NAT10Q9H0A0 1025 aaKnown RBP24.81■■□□□ 1.56
USP48-205ENST00000421625 A0A1B0GVL5 298 aa24.81■■□□□ 1.56
USP48-205ENST00000421625 ATP5JP18859 108 aa24.81■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms