RNA–Protein interactions for RNA: ENST00000420706.1

TMEM53-206, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-206ENST00000420706 KIF1BPQ96EK5 621 aa15.44■□□□□ 0.06
TMEM53-206ENST00000420706 MINPP1Q9UNW1 487 aa15.44■□□□□ 0.06
TMEM53-206ENST00000420706 SPEF2Q9C093 1822 aa15.43■□□□□ 0.06
TMEM53-206ENST00000420706 SMARCA5O60264 1052 aaPredicted RBP15.43■□□□□ 0.06
TMEM53-206ENST00000420706 NUCB1Q02818 461 aa15.43■□□□□ 0.06
TMEM53-206ENST00000420706 TFCP2Q12800 502 aa15.43■□□□□ 0.06
TMEM53-206ENST00000420706 SP8Q8IXZ3 490 aa15.43■□□□□ 0.06
TMEM53-206ENST00000420706 LRRCC1Q9C099 1032 aa15.43■□□□□ 0.06
TMEM53-206ENST00000420706 CEP126Q9P2H0 1117 aa15.43■□□□□ 0.06
TMEM53-206ENST00000420706 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.43■□□□□ 0.06
TMEM53-206ENST00000420706 KIAA1551Q9HCM1 1747 aa15.43■□□□□ 0.06
TMEM53-206ENST00000420706 LRP5O75197 1615 aa15.43■□□□□ 0.06
TMEM53-206ENST00000420706 MROH5Q6ZUA9 1318 aa15.43■□□□□ 0.06
TMEM53-206ENST00000420706 CHRNDQ07001 517 aa15.42■□□□□ 0.06
TMEM53-206ENST00000420706 METTL24Q5JXM2 366 aa15.42■□□□□ 0.06
TMEM53-206ENST00000420706 TMC4Q7Z404 712 aa15.42■□□□□ 0.06
TMEM53-206ENST00000420706 DLEC1Q9Y238 1755 aa15.41■□□□□ 0.06
TMEM53-206ENST00000420706 PPEF1O14829 653 aaPredicted RBP15.41■□□□□ 0.06
TMEM53-206ENST00000420706 PDE8BO95263 885 aa15.41■□□□□ 0.06
TMEM53-206ENST00000420706 CHD1LQ86WJ1 897 aa15.41■□□□□ 0.06
TMEM53-206ENST00000420706 TTLL6Q8N841 843 aa15.41■□□□□ 0.06
TMEM53-206ENST00000420706 VGLL2Q8N8G2 317 aa15.41■□□□□ 0.06
TMEM53-206ENST00000420706 HELBQ8NG08 1087 aaPredicted RBP15.41■□□□□ 0.06
TMEM53-206ENST00000420706 IL1RAPL2Q9NP60 686 aa15.41■□□□□ 0.06
TMEM53-206ENST00000420706 PIM2Q9P1W9 311 aa15.41■□□□□ 0.06
TMEM53-206ENST00000420706 SRCAPQ6ZRS2 3230 aa15.41■□□□□ 0.06
TMEM53-206ENST00000420706 TAF5LO75529 589 aa15.4■□□□□ 0.06
TMEM53-206ENST00000420706 PRPF40BQ6NWY9 871 aaKnown RBP15.4■□□□□ 0.06
TMEM53-206ENST00000420706 SLC51AQ86UW1 340 aa15.4■□□□□ 0.06
TMEM53-206ENST00000420706 FHDC1Q9C0D6 1143 aaPredicted RBP15.4■□□□□ 0.06
TMEM53-206ENST00000420706 LNPKQ9C0E8 428 aa15.4■□□□□ 0.06
TMEM53-206ENST00000420706 ANKRD2Q9GZV1 360 aa15.4■□□□□ 0.06
TMEM53-206ENST00000420706 GPR108Q9NPR9 543 aa15.4■□□□□ 0.06
TMEM53-206ENST00000420706 ZBTB47Q9UFB7 747 aaPredicted RBP15.4■□□□□ 0.06
TMEM53-206ENST00000420706 ATP6V0A2Q9Y487 856 aa15.4■□□□□ 0.06
TMEM53-206ENST00000420706 SLX4Q8IY92 1834 aa15.4■□□□□ 0.06
TMEM53-206ENST00000420706 TNNI3KQ59H18 835 aa15.39■□□□□ 0.05
TMEM53-206ENST00000420706 C16orf71Q8IYS4 520 aaPredicted RBP15.39■□□□□ 0.05
TMEM53-206ENST00000420706 CLASRPQ8N2M8 674 aaKnown RBP15.39■□□□□ 0.05
TMEM53-206ENST00000420706 NLGN2Q8NFZ4 835 aa15.39■□□□□ 0.05
TMEM53-206ENST00000420706 C7orf43Q8WVR3 580 aa15.39■□□□□ 0.05
TMEM53-206ENST00000420706 EAF2Q96CJ1 260 aaPredicted RBP15.39■□□□□ 0.05
TMEM53-206ENST00000420706 AKAP2Q9Y2D5 859 aa15.39■□□□□ 0.05
TMEM53-206ENST00000420706 FPGT-TNNI3KV9GXZ4 949 aa15.39■□□□□ 0.05
TMEM53-206ENST00000420706 CACNA1SQ13698 1873 aa15.39■□□□□ 0.05
TMEM53-206ENST00000420706 TIMM10P62072 90 aa15.38■□□□□ 0.05
TMEM53-206ENST00000420706 GPSM2P81274 684 aa15.38■□□□□ 0.05
TMEM53-206ENST00000420706 SYT17Q9BSW7 474 aa15.38■□□□□ 0.05
TMEM53-206ENST00000420706 BCL11AQ9H165 835 aa15.38■□□□□ 0.05
TMEM53-206ENST00000420706 SNAP23O00161 211 aa15.37■□□□□ 0.05
TMEM53-206ENST00000420706 FGFR2P21802 821 aa15.37■□□□□ 0.05
TMEM53-206ENST00000420706 PDE4AP27815 886 aa15.37■□□□□ 0.05
TMEM53-206ENST00000420706 UBE4AQ14139 1066 aa15.37■□□□□ 0.05
TMEM53-206ENST00000420706 OLFM4Q6UX06 510 aa15.37■□□□□ 0.05
TMEM53-206ENST00000420706 CCDC8Q9H0W5 538 aaPredicted RBP15.37■□□□□ 0.05
TMEM53-206ENST00000420706 PODXL2Q9NZ53 605 aa15.37■□□□□ 0.05
TMEM53-206ENST00000420706 NSFL1CQ9UNZ2 370 aaKnown RBP15.37■□□□□ 0.05
TMEM53-206ENST00000420706 A0A1B0GUL7 405 aa15.36■□□□□ 0.05
TMEM53-206ENST00000420706 WTIPA6NIX2 430 aaPredicted RBP15.36■□□□□ 0.05
TMEM53-206ENST00000420706 ATP2B3Q16720 1220 aa15.36■□□□□ 0.05
TMEM53-206ENST00000420706 DALRD3Q5D0E6 543 aaKnown RBP15.36■□□□□ 0.05
TMEM53-206ENST00000420706 CC2D2BQ6DHV5 1058 aa15.36■□□□□ 0.05
TMEM53-206ENST00000420706 AACSQ86V21 672 aa15.36■□□□□ 0.05
TMEM53-206ENST00000420706 SKAP1Q86WV1 359 aa15.36■□□□□ 0.05
TMEM53-206ENST00000420706 NEUROD6Q96NK8 337 aa15.36■□□□□ 0.05
TMEM53-206ENST00000420706 TMX4Q9H1E5 349 aaPredicted RBP15.36■□□□□ 0.05
TMEM53-206ENST00000420706 ANKIB1Q9P2G1 1089 aa15.36■□□□□ 0.05
TMEM53-206ENST00000420706 ZNF219Q9P2Y4 722 aaPredicted RBP15.36■□□□□ 0.05
TMEM53-206ENST00000420706 LEMD3Q9Y2U8 911 aa15.36■□□□□ 0.05
TMEM53-206ENST00000420706 XDHP47989 1333 aa15.36■□□□□ 0.05
TMEM53-206ENST00000420706 A0A1B0GUL6 1792 aa15.36■□□□□ 0.05
TMEM53-206ENST00000420706 BRCA1P38398 1863 aaKnown RBP15.35■□□□□ 0.05
TMEM53-206ENST00000420706 LRRC37AA6NMS7 1700 aa15.35■□□□□ 0.05
TMEM53-206ENST00000420706 C21orf2O43822 256 aa15.35■□□□□ 0.05
TMEM53-206ENST00000420706 IFIT2P09913 472 aaKnown RBP15.35■□□□□ 0.05
TMEM53-206ENST00000420706 ATP2B4P23634 1241 aa15.35■□□□□ 0.05
TMEM53-206ENST00000420706 PUM3Q15397 648 aaKnown RBP15.35■□□□□ 0.05
TMEM53-206ENST00000420706 MPNDQ8N594 471 aa15.35■□□□□ 0.05
TMEM53-206ENST00000420706 OTUD7AQ8TE49 926 aaPredicted RBP15.35■□□□□ 0.05
TMEM53-206ENST00000420706 LPIN2Q92539 896 aa15.35■□□□□ 0.05
TMEM53-206ENST00000420706 WWC3Q9ULE0 1092 aa15.35■□□□□ 0.05
TMEM53-206ENST00000420706 SLC5A1P13866 664 aa15.34■□□□□ 0.05
TMEM53-206ENST00000420706 PLEKHM2Q8IWE5 1019 aa15.34■□□□□ 0.05
TMEM53-206ENST00000420706 XAGE2Q96GT9 111 aa15.34■□□□□ 0.05
TMEM53-206ENST00000420706 DBNDD2Q9BQY9 259 aa15.34■□□□□ 0.05
TMEM53-206ENST00000420706 POLLQ9UGP5 575 aa15.34■□□□□ 0.05
TMEM53-206ENST00000420706 ZNF804BA4D1E1 1349 aa15.34■□□□□ 0.05
TMEM53-206ENST00000420706 SALL3Q9BXA9 1300 aa15.34■□□□□ 0.05
TMEM53-206ENST00000420706 ZNF609O15014 1411 aa15.34■□□□□ 0.05
TMEM53-206ENST00000420706 IFIT1P09914 478 aaKnown RBP15.33■□□□□ 0.04
TMEM53-206ENST00000420706 ADORA1P30542 326 aa15.33■□□□□ 0.04
TMEM53-206ENST00000420706 KCNJ4P48050 445 aa15.33■□□□□ 0.04
TMEM53-206ENST00000420706 GRIPAP1Q4V328 841 aa15.33■□□□□ 0.04
TMEM53-206ENST00000420706 TBC1D16Q8TBP0 767 aa15.33■□□□□ 0.04
TMEM53-206ENST00000420706 TLR7Q9NYK1 1049 aaKnown RBP15.33■□□□□ 0.04
TMEM53-206ENST00000420706 DBNLQ9UJU6 430 aaKnown RBP15.33■□□□□ 0.04
TMEM53-206ENST00000420706 GGA1Q9UJY5 639 aa15.33■□□□□ 0.04
TMEM53-206ENST00000420706 BCS1LQ9Y276 419 aa15.33■□□□□ 0.04
TMEM53-206ENST00000420706 UFL1O94874 794 aa15.32■□□□□ 0.04
TMEM53-206ENST00000420706 CCDC93Q567U6 631 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms