RNA–Protein interactions for RNA: ENST00000418107.2

HLA-DMB-258, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

APPRIS P1 BASIC

Gene HLA-DMB, Length 1,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-258ENST00000418107 ABHD8Q96I13 439 aa16.45■□□□□ 0.22
HLA-DMB-258ENST00000418107 CST9Q5W186 159 aa16.44■□□□□ 0.22
HLA-DMB-258ENST00000418107 CYP4F22Q6NT55 531 aa16.44■□□□□ 0.22
HLA-DMB-258ENST00000418107 SRCIN1Q9C0H9 1055 aa16.44■□□□□ 0.22
HLA-DMB-258ENST00000418107 THSD7BQ9C0I4 1608 aa16.44■□□□□ 0.22
HLA-DMB-258ENST00000418107 GNAI3P08754 354 aa16.43■□□□□ 0.22
HLA-DMB-258ENST00000418107 ECE1P42892 770 aa16.43■□□□□ 0.22
HLA-DMB-258ENST00000418107 PDIA6Q15084 440 aa16.43■□□□□ 0.22
HLA-DMB-258ENST00000418107 KSR2Q6VAB6 950 aa16.43■□□□□ 0.22
HLA-DMB-258ENST00000418107 PPP1R42Q7Z4L9 355 aa16.43■□□□□ 0.22
HLA-DMB-258ENST00000418107 RIC3Q7Z5B4 369 aa16.43■□□□□ 0.22
HLA-DMB-258ENST00000418107 XAGE3Q8WTP9 111 aa16.43■□□□□ 0.22
HLA-DMB-258ENST00000418107 NLRP3Q96P20 1036 aa16.43■□□□□ 0.22
HLA-DMB-258ENST00000418107 GPR101Q96P66 508 aaPredicted RBP16.43■□□□□ 0.22
HLA-DMB-258ENST00000418107 MAP3K2Q9Y2U5 619 aa16.43■□□□□ 0.22
HLA-DMB-258ENST00000418107 ATP6V0A2Q9Y487 856 aa16.43■□□□□ 0.22
HLA-DMB-258ENST00000418107 ERBB4Q15303 1308 aa16.43■□□□□ 0.22
HLA-DMB-258ENST00000418107 HDAC1Q13547 482 aaPredicted RBP16.42■□□□□ 0.22
HLA-DMB-258ENST00000418107 PARP10Q53GL7 1025 aa16.42■□□□□ 0.22
HLA-DMB-258ENST00000418107 COPS6Q7L5N1 327 aa16.42■□□□□ 0.22
HLA-DMB-258ENST00000418107 MEIS3Q99687 375 aa16.42■□□□□ 0.22
HLA-DMB-258ENST00000418107 TMX4Q9H1E5 349 aaPredicted RBP16.42■□□□□ 0.22
HLA-DMB-258ENST00000418107 GPRC5DQ9NZD1 345 aa16.42■□□□□ 0.22
HLA-DMB-258ENST00000418107 TLL2Q9Y6L7 1015 aa16.42■□□□□ 0.22
HLA-DMB-258ENST00000418107 LRP10Q7Z4F1 713 aa16.41■□□□□ 0.22
HLA-DMB-258ENST00000418107 BEGAINQ9BUH8 593 aa16.41■□□□□ 0.22
HLA-DMB-258ENST00000418107 UTP14AQ9BVJ6 771 aaKnown RBP16.41■□□□□ 0.22
HLA-DMB-258ENST00000418107 ADARB2Q9NS39 739 aaKnown RBP16.41■□□□□ 0.22
HLA-DMB-258ENST00000418107 GNAI2P04899 355 aa16.4■□□□□ 0.22
HLA-DMB-258ENST00000418107 CXCL9Q07325 125 aa16.4■□□□□ 0.22
HLA-DMB-258ENST00000418107 NEXNQ0ZGT2 675 aa16.4■□□□□ 0.22
HLA-DMB-258ENST00000418107 TSKSQ9UJT2 592 aa16.4■□□□□ 0.22
HLA-DMB-258ENST00000418107 ZNRF3Q9ULT6 936 aa16.4■□□□□ 0.22
HLA-DMB-258ENST00000418107 TRPM7Q96QT4 1865 aa16.4■□□□□ 0.22
HLA-DMB-258ENST00000418107 AOC2O75106 756 aa16.39■□□□□ 0.21
HLA-DMB-258ENST00000418107 GMPSP49915 693 aaPredicted RBP16.39■□□□□ 0.21
HLA-DMB-258ENST00000418107 FAM161AQ3B820 660 aa16.39■□□□□ 0.21
HLA-DMB-258ENST00000418107 SLC10A5Q5PT55 438 aa16.39■□□□□ 0.21
HLA-DMB-258ENST00000418107 VPS33BQ9H267 617 aa16.39■□□□□ 0.21
HLA-DMB-258ENST00000418107 CELF2O95319 508 aaKnown RBP16.38■□□□□ 0.21
HLA-DMB-258ENST00000418107 UBTFL1P0CB47 393 aaPredicted RBP16.38■□□□□ 0.21
HLA-DMB-258ENST00000418107 BEND3Q5T5X7 828 aa16.38■□□□□ 0.21
HLA-DMB-258ENST00000418107 DPP8Q6V1X1 898 aaPredicted RBP16.38■□□□□ 0.21
HLA-DMB-258ENST00000418107 ANKRD13DQ6ZTN6 518 aa16.38■□□□□ 0.21
HLA-DMB-258ENST00000418107 SUPT20HQ8NEM7 779 aa16.38■□□□□ 0.21
HLA-DMB-258ENST00000418107 RTFDC1Q9BY42 306 aaPredicted RBP16.38■□□□□ 0.21
HLA-DMB-258ENST00000418107 GLIS2Q9BZE0 524 aaPredicted RBP16.38■□□□□ 0.21
HLA-DMB-258ENST00000418107 ALDH1L1O75891 902 aa16.38■□□□□ 0.21
HLA-DMB-258ENST00000418107 HCLS1P14317 486 aaPredicted RBP16.38■□□□□ 0.21
HLA-DMB-258ENST00000418107 RGS3P49796 1198 aa16.38■□□□□ 0.21
HLA-DMB-258ENST00000418107 SAPCD2Q86UD0 394 aa16.38■□□□□ 0.21
HLA-DMB-258ENST00000418107 RPAP2Q8IXW5 612 aaPredicted RBP16.38■□□□□ 0.21
HLA-DMB-258ENST00000418107 C9orf78Q9NZ63 289 aaPredicted RBP16.38■□□□□ 0.21
HLA-DMB-258ENST00000418107 CCDC85CA6NKD9 419 aa16.37■□□□□ 0.21
HLA-DMB-258ENST00000418107 HMMRO75330 724 aa16.37■□□□□ 0.21
HLA-DMB-258ENST00000418107 BBOX1O75936 387 aa16.37■□□□□ 0.21
HLA-DMB-258ENST00000418107 RAD17O75943 681 aa16.37■□□□□ 0.21
HLA-DMB-258ENST00000418107 CIAPIN1Q6FI81 312 aa16.37■□□□□ 0.21
HLA-DMB-258ENST00000418107 SP8Q8IXZ3 490 aa16.37■□□□□ 0.21
HLA-DMB-258ENST00000418107 MPNDQ8N594 471 aa16.37■□□□□ 0.21
HLA-DMB-258ENST00000418107 ANKRD44Q8N8A2 993 aa16.37■□□□□ 0.21
HLA-DMB-258ENST00000418107 ANKRD36CQ5JPF3 1778 aa16.37■□□□□ 0.21
HLA-DMB-258ENST00000418107 MAP2K2P36507 400 aa16.36■□□□□ 0.21
HLA-DMB-258ENST00000418107 KIAA2012Q0VF49 1180 aa16.36■□□□□ 0.21
HLA-DMB-258ENST00000418107 NLRP10Q86W26 655 aa16.36■□□□□ 0.21
HLA-DMB-258ENST00000418107 LINS1Q8NG48 757 aa16.36■□□□□ 0.21
HLA-DMB-258ENST00000418107 MYD88Q99836 296 aa16.36■□□□□ 0.21
HLA-DMB-258ENST00000418107 METTL22Q9BUU2 404 aaPredicted RBP16.36■□□□□ 0.21
HLA-DMB-258ENST00000418107 USP44Q9H0E7 712 aa16.36■□□□□ 0.21
HLA-DMB-258ENST00000418107 ZNF408Q9H9D4 720 aa16.36■□□□□ 0.21
HLA-DMB-258ENST00000418107 ZBTB47Q9UFB7 747 aaPredicted RBP16.36■□□□□ 0.21
HLA-DMB-258ENST00000418107 HDAC5Q9UQL6 1122 aa16.36■□□□□ 0.21
HLA-DMB-258ENST00000418107 SHTN1A0MZ66 631 aa16.35■□□□□ 0.21
HLA-DMB-258ENST00000418107 HIRAP54198 1017 aaPredicted RBP16.35■□□□□ 0.21
HLA-DMB-258ENST00000418107 CEP85Q6P2H3 762 aa16.35■□□□□ 0.21
HLA-DMB-258ENST00000418107 SKAP1Q86WV1 359 aa16.35■□□□□ 0.21
HLA-DMB-258ENST00000418107 PLBD2Q8NHP8 589 aa16.35■□□□□ 0.21
HLA-DMB-258ENST00000418107 TRPM4Q8TD43 1214 aa16.35■□□□□ 0.21
HLA-DMB-258ENST00000418107 PGAP2Q9UHJ9 254 aa16.35■□□□□ 0.21
HLA-DMB-258ENST00000418107 LRRFIP2Q9Y608 721 aaKnown RBP16.35■□□□□ 0.21
HLA-DMB-258ENST00000418107 LAMB2P55268 1798 aa16.35■□□□□ 0.21
HLA-DMB-258ENST00000418107 GRAPQ13588 217 aa16.34■□□□□ 0.21
HLA-DMB-258ENST00000418107 TNIP1Q15025 636 aa16.34■□□□□ 0.21
HLA-DMB-258ENST00000418107 HSP90AB3PQ58FF7 597 aa16.34■□□□□ 0.21
HLA-DMB-258ENST00000418107 DDX46Q7L014 1031 aaKnown RBP16.34■□□□□ 0.21
HLA-DMB-258ENST00000418107 GRAPLQ8TC17 118 aaPredicted RBP16.34■□□□□ 0.21
HLA-DMB-258ENST00000418107 GCC1Q96CN9 775 aa16.34■□□□□ 0.21
HLA-DMB-258ENST00000418107 TRMT112Q9UI30 125 aaKnown RBP16.34■□□□□ 0.21
HLA-DMB-258ENST00000418107 CDHR2Q9BYE9 1310 aa16.34■□□□□ 0.21
HLA-DMB-258ENST00000418107 YDJCA8MPS7 323 aa16.33■□□□□ 0.2
HLA-DMB-258ENST00000418107 CWF19L2Q2TBE0 894 aaKnown RBP16.33■□□□□ 0.2
HLA-DMB-258ENST00000418107 SIRT2Q8IXJ6 389 aa16.33■□□□□ 0.2
HLA-DMB-258ENST00000418107 SMC5Q8IY18 1101 aa16.33■□□□□ 0.2
HLA-DMB-258ENST00000418107 TCIRG1Q13488 830 aa16.32■□□□□ 0.2
HLA-DMB-258ENST00000418107 ANKRD45Q5TZF3 282 aa16.32■□□□□ 0.2
HLA-DMB-258ENST00000418107 CDC37L1Q7L3B6 337 aa16.32■□□□□ 0.2
HLA-DMB-258ENST00000418107 ZC3H15Q8WU90 426 aaKnown RBP16.32■□□□□ 0.2
HLA-DMB-258ENST00000418107 HHIPL1Q96JK4 782 aa16.32■□□□□ 0.2
HLA-DMB-258ENST00000418107 CNOT7Q9UIV1 285 aaKnown RBP16.32■□□□□ 0.2
HLA-DMB-258ENST00000418107 SH3TC1Q8TE82 1336 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms