RNA–Protein interactions for RNA: ENST00000417540.5

HDLBP-206, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-206ENST00000417540 ANKRD18AQ8IVF6 992 aa13□□□□□ -0.33
HDLBP-206ENST00000417540 C16orf71Q8IYS4 520 aaPredicted RBP13□□□□□ -0.33
HDLBP-206ENST00000417540 JMYQ8N9B5 988 aa13□□□□□ -0.33
HDLBP-206ENST00000417540 ZNF594Q96JF6 807 aaPredicted RBP13□□□□□ -0.33
HDLBP-206ENST00000417540 CHMP3Q9Y3E7 222 aa13□□□□□ -0.33
HDLBP-206ENST00000417540 C6orf229H3BNL8 230 aa12.99□□□□□ -0.33
HDLBP-206ENST00000417540 ECE2O60344 883 aa12.99□□□□□ -0.33
HDLBP-206ENST00000417540 VEGFAP15692 232 aaPredicted RBP12.99□□□□□ -0.33
HDLBP-206ENST00000417540 GMPSP49915 693 aaPredicted RBP12.99□□□□□ -0.33
HDLBP-206ENST00000417540 RPS8P62241 208 aaKnown RBP12.99□□□□□ -0.33
HDLBP-206ENST00000417540 FMR1Q06787 632 aaKnown RBP eCLIP12.99□□□□□ -0.334e-8■■■□□ 16.1
HDLBP-206ENST00000417540 CXCL9Q07325 125 aa12.99□□□□□ -0.33
HDLBP-206ENST00000417540 EAPPQ56P03 285 aaPredicted RBP12.99□□□□□ -0.33
HDLBP-206ENST00000417540 TRPM4Q8TD43 1214 aa12.99□□□□□ -0.33
HDLBP-206ENST00000417540 JDP2Q8WYK2 163 aa12.99□□□□□ -0.33
HDLBP-206ENST00000417540 ZBTB12Q9Y330 459 aaPredicted RBP12.99□□□□□ -0.33
HDLBP-206ENST00000417540 ECM29Q5VYK3 1845 aa12.99□□□□□ -0.33
HDLBP-206ENST00000417540 MED23Q9ULK4 1368 aa12.98□□□□□ -0.33
HDLBP-206ENST00000417540 PTPRCP08575 1304 aa12.98□□□□□ -0.33
HDLBP-206ENST00000417540 EGFRP00533 1210 aa12.98□□□□□ -0.33
HDLBP-206ENST00000417540 EPHX2P34913 555 aa12.98□□□□□ -0.33
HDLBP-206ENST00000417540 EPS15P42566 896 aa12.98□□□□□ -0.33
HDLBP-206ENST00000417540 EIF6P56537 245 aaKnown RBP12.98□□□□□ -0.33
HDLBP-206ENST00000417540 GPC2Q8N158 579 aa12.98□□□□□ -0.33
HDLBP-206ENST00000417540 ANKRD44Q8N8A2 993 aa12.98□□□□□ -0.33
HDLBP-206ENST00000417540 SRCIN1Q9C0H9 1055 aa12.98□□□□□ -0.33
HDLBP-206ENST00000417540 XDHP47989 1333 aa12.97□□□□□ -0.33
HDLBP-206ENST00000417540 IRS2Q9Y4H2 1338 aa12.97□□□□□ -0.33
HDLBP-206ENST00000417540 PSMD14O00487 310 aa12.97□□□□□ -0.33
HDLBP-206ENST00000417540 RARSP54136 660 aaKnown RBP12.97□□□□□ -0.33
HDLBP-206ENST00000417540 DPY19L2Q6NUT2 758 aa12.97□□□□□ -0.33
HDLBP-206ENST00000417540 LMBR1LQ6UX01 489 aa12.97□□□□□ -0.33
HDLBP-206ENST00000417540 TMC4Q7Z404 712 aa12.97□□□□□ -0.33
HDLBP-206ENST00000417540 TXNRD3Q86VQ6 643 aa12.97□□□□□ -0.33
HDLBP-206ENST00000417540 SMC1BQ8NDV3 1235 aa12.97□□□□□ -0.33
HDLBP-206ENST00000417540 CDC5LQ99459 802 aaKnown RBP12.97□□□□□ -0.33
HDLBP-206ENST00000417540 CHMP4AQ9BY43 222 aa12.97□□□□□ -0.33
HDLBP-206ENST00000417540 BICC1Q9H694 974 aaKnown RBP12.97□□□□□ -0.33
HDLBP-206ENST00000417540 PODXL2Q9NZ53 605 aa12.97□□□□□ -0.33
HDLBP-206ENST00000417540 ANKIB1Q9P2G1 1089 aa12.97□□□□□ -0.33
HDLBP-206ENST00000417540 HACL1Q9UJ83 578 aa12.97□□□□□ -0.33
HDLBP-206ENST00000417540 GGA1Q9UJY5 639 aa12.97□□□□□ -0.33
HDLBP-206ENST00000417540 POLR2AP24928 1970 aaKnown RBP12.97□□□□□ -0.33
HDLBP-206ENST00000417540 ZBED9Q6R2W3 1325 aa12.96□□□□□ -0.33
HDLBP-206ENST00000417540 ALDH1L1O75891 902 aa12.96□□□□□ -0.33
HDLBP-206ENST00000417540 CSF1RP07333 972 aa12.96□□□□□ -0.33
HDLBP-206ENST00000417540 ALDH1L2Q3SY69 923 aa12.96□□□□□ -0.33
HDLBP-206ENST00000417540 MAP1SQ66K74 1059 aaPredicted RBP12.96□□□□□ -0.33
HDLBP-206ENST00000417540 SUPT20HQ8NEM7 779 aa12.96□□□□□ -0.33
HDLBP-206ENST00000417540 MXD3Q9BW11 206 aa12.96□□□□□ -0.33
HDLBP-206ENST00000417540 ZNRF3Q9ULT6 936 aa12.96□□□□□ -0.33
HDLBP-206ENST00000417540 NOB1Q9ULX3 412 aaKnown RBP12.96□□□□□ -0.33
HDLBP-206ENST00000417540 MINPP1Q9UNW1 487 aa12.96□□□□□ -0.33
HDLBP-206ENST00000417540 UTYO14607 1347 aa12.95□□□□□ -0.34
HDLBP-206ENST00000417540 BCAR3O75815 825 aa12.95□□□□□ -0.34
HDLBP-206ENST00000417540 CHRNDQ07001 517 aa12.95□□□□□ -0.34
HDLBP-206ENST00000417540 WASHC4Q2M389 1173 aa12.95□□□□□ -0.34
HDLBP-206ENST00000417540 CIAPIN1Q6FI81 312 aa12.95□□□□□ -0.34
HDLBP-206ENST00000417540 TNS4Q8IZW8 715 aa12.95□□□□□ -0.34
HDLBP-206ENST00000417540 HELBQ8NG08 1087 aaPredicted RBP12.95□□□□□ -0.34
HDLBP-206ENST00000417540 KLHDC4Q8TBB5 520 aa12.95□□□□□ -0.34
HDLBP-206ENST00000417540 PUS3Q9BZE2 481 aaKnown RBP12.95□□□□□ -0.34
HDLBP-206ENST00000417540 COL1A1P02452 1464 aaPredicted RBP12.95□□□□□ -0.34
HDLBP-206ENST00000417540 ZNF609O15014 1411 aa12.95□□□□□ -0.34
HDLBP-206ENST00000417540 ASTN2O75129 1339 aaPredicted RBP12.94□□□□□ -0.34
HDLBP-206ENST00000417540 IQCA1LA6NCM1 817 aa12.94□□□□□ -0.34
HDLBP-206ENST00000417540 TAF5LO75529 589 aa12.94□□□□□ -0.34
HDLBP-206ENST00000417540 IGHMBP2P38935 993 aaKnown RBP12.94□□□□□ -0.34
HDLBP-206ENST00000417540 FSTL1Q12841 308 aa12.94□□□□□ -0.34
HDLBP-206ENST00000417540 CHADLQ6NUI6 762 aa12.94□□□□□ -0.34
HDLBP-206ENST00000417540 DLK2Q6UY11 383 aa12.94□□□□□ -0.34
HDLBP-206ENST00000417540 LDHDQ86WU2 507 aa12.94□□□□□ -0.34
HDLBP-206ENST00000417540 TMX4Q9H1E5 349 aaPredicted RBP12.94□□□□□ -0.34
HDLBP-206ENST00000417540 BSDC1Q9NW68 430 aaPredicted RBP12.94□□□□□ -0.34
HDLBP-206ENST00000417540 C9orf78Q9NZ63 289 aaPredicted RBP12.94□□□□□ -0.34
HDLBP-206ENST00000417540 GPRC5DQ9NZD1 345 aa12.94□□□□□ -0.34
HDLBP-206ENST00000417540 PASKQ96RG2 1323 aa12.93□□□□□ -0.34
HDLBP-206ENST00000417540 TRAF5O00463 557 aa12.93□□□□□ -0.34
HDLBP-206ENST00000417540 CCT4P50991 539 aaKnown RBP12.93□□□□□ -0.34
HDLBP-206ENST00000417540 GRIPAP1Q4V328 841 aa12.93□□□□□ -0.34
HDLBP-206ENST00000417540 MICALL2Q8IY33 904 aa12.93□□□□□ -0.34
HDLBP-206ENST00000417540 MEIS3Q99687 375 aa12.93□□□□□ -0.34
HDLBP-206ENST00000417540 JAG2Q9Y219 1238 aa12.93□□□□□ -0.34
HDLBP-206ENST00000417540 OTOFQ9HC10 1997 aa12.92□□□□□ -0.34
HDLBP-206ENST00000417540 KIF16BQ96L93 1317 aa12.92□□□□□ -0.34
HDLBP-206ENST00000417540 ANKRD18BA2A2Z9 1011 aa12.92□□□□□ -0.34
HDLBP-206ENST00000417540 TRIM27P14373 513 aa12.92□□□□□ -0.34
HDLBP-206ENST00000417540 HSP90B1P14625 803 aaKnown RBP12.92□□□□□ -0.34
HDLBP-206ENST00000417540 LMOD1P29536 600 aaPredicted RBP12.92□□□□□ -0.34
HDLBP-206ENST00000417540 HIRAP54198 1017 aaPredicted RBP12.92□□□□□ -0.34
HDLBP-206ENST00000417540 RABL6Q3YEC7 729 aaPredicted RBP12.92□□□□□ -0.34
HDLBP-206ENST00000417540 EYA3Q99504 573 aa12.92□□□□□ -0.34
HDLBP-206ENST00000417540 USP44Q9H0E7 712 aa12.92□□□□□ -0.34
HDLBP-206ENST00000417540 ATP2B4P23634 1241 aa12.91□□□□□ -0.34
HDLBP-206ENST00000417540 IFIT5Q13325 482 aaKnown RBP12.91□□□□□ -0.34
HDLBP-206ENST00000417540 LRRC24Q50LG9 513 aa12.91□□□□□ -0.34
HDLBP-206ENST00000417540 SAMD7Q7Z3H4 446 aa12.91□□□□□ -0.34
HDLBP-206ENST00000417540 FBXW7Q969H0 707 aa12.91□□□□□ -0.34
HDLBP-206ENST00000417540 SCAF8Q9UPN6 1271 aaKnown RBP12.91□□□□□ -0.34
HDLBP-206ENST00000417540 ZNF804BA4D1E1 1349 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms