RNA–Protein interactions for RNA: ENST00000417470.1

COMMD3-BMI1-201, Transcript of COMMD3-BMI1 readthrough, humanhuman

TSL 5

Gene COMMD3-BMI1, Length 745 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1-201ENST00000417470 GPSM2P81274 684 aa21.92■■□□□ 1.1
COMMD3-BMI1-201ENST00000417470 ANKRD2Q9GZV1 360 aa21.92■■□□□ 1.1
COMMD3-BMI1-201ENST00000417470 RNF181Q9P0P0 153 aa21.92■■□□□ 1.1
COMMD3-BMI1-201ENST00000417470 XDHP47989 1333 aa21.91■■□□□ 1.1
COMMD3-BMI1-201ENST00000417470 IARSP41252 1262 aaKnown RBP21.91■■□□□ 1.1
COMMD3-BMI1-201ENST00000417470 TAF7LQ5H9L4 462 aa21.91■■□□□ 1.1
COMMD3-BMI1-201ENST00000417470 ZNF277Q9NRM2 450 aaPredicted RBP21.91■■□□□ 1.1
COMMD3-BMI1-201ENST00000417470 FBXO3Q9UK99 471 aa21.91■■□□□ 1.1
COMMD3-BMI1-201ENST00000417470 LDHAL6AQ6ZMR3 332 aa21.9■■□□□ 1.1
COMMD3-BMI1-201ENST00000417470 TBC1D16Q8TBP0 767 aa21.9■■□□□ 1.1
COMMD3-BMI1-201ENST00000417470 POLLQ9UGP5 575 aa21.9■■□□□ 1.1
COMMD3-BMI1-201ENST00000417470 COG6Q9Y2V7 657 aa21.9■■□□□ 1.1
COMMD3-BMI1-201ENST00000417470 LTBP1Q14766 1721 aa21.89■■□□□ 1.1
COMMD3-BMI1-201ENST00000417470 ATP2B4P23634 1241 aa21.89■■□□□ 1.09
COMMD3-BMI1-201ENST00000417470 YY1P25490 414 aa21.89■■□□□ 1.09
COMMD3-BMI1-201ENST00000417470 PTPN12Q05209 780 aaKnown RBP21.89■■□□□ 1.09
COMMD3-BMI1-201ENST00000417470 C20orf194Q5TEA3 1177 aa21.89■■□□□ 1.09
COMMD3-BMI1-201ENST00000417470 ZNF594Q96JF6 807 aaPredicted RBP21.89■■□□□ 1.09
COMMD3-BMI1-201ENST00000417470 ANKIB1Q9P2G1 1089 aa21.89■■□□□ 1.09
COMMD3-BMI1-201ENST00000417470 GGA1Q9UJY5 639 aa21.89■■□□□ 1.09
COMMD3-BMI1-201ENST00000417470 LEMD3Q9Y2U8 911 aa21.89■■□□□ 1.09
COMMD3-BMI1-201ENST00000417470 RIPOR2Q9Y4F9 1068 aa21.89■■□□□ 1.09
COMMD3-BMI1-201ENST00000417470 DUOX1Q9NRD9 1551 aa21.88■■□□□ 1.09
COMMD3-BMI1-201ENST00000417470 CHRNDQ07001 517 aa21.88■■□□□ 1.09
COMMD3-BMI1-201ENST00000417470 KIAA2012Q0VF49 1180 aa21.88■■□□□ 1.09
COMMD3-BMI1-201ENST00000417470 EYA3Q99504 573 aa21.88■■□□□ 1.09
COMMD3-BMI1-201ENST00000417470 ZBTB40Q9NUA8 1239 aa21.88■■□□□ 1.09
COMMD3-BMI1-201ENST00000417470 COPRSQ9NQ92 184 aa21.87■■□□□ 1.09
COMMD3-BMI1-201ENST00000417470 CNNM1Q9NRU3 951 aa21.87■■□□□ 1.09
COMMD3-BMI1-201ENST00000417470 DICER1Q9UPY3 1922 aaKnown RBP21.86■■□□□ 1.09
COMMD3-BMI1-201ENST00000417470 MROH5Q6ZUA9 1318 aa21.86■■□□□ 1.09
COMMD3-BMI1-201ENST00000417470 C6orf229H3BNL8 230 aa21.86■■□□□ 1.09
COMMD3-BMI1-201ENST00000417470 ATP8B2P98198 1209 aa21.86■■□□□ 1.09
COMMD3-BMI1-201ENST00000417470 WASHC4Q2M389 1173 aa21.86■■□□□ 1.09
COMMD3-BMI1-201ENST00000417470 FZD9O00144 591 aa21.85■■□□□ 1.09
COMMD3-BMI1-201ENST00000417470 SRGAP3O43295 1099 aa21.85■■□□□ 1.09
COMMD3-BMI1-201ENST00000417470 PPIP5K2O43314 1243 aa21.85■■□□□ 1.09
COMMD3-BMI1-201ENST00000417470 CIAO1O76071 339 aa21.85■■□□□ 1.09
COMMD3-BMI1-201ENST00000417470 UFL1O94874 794 aa21.85■■□□□ 1.09
COMMD3-BMI1-201ENST00000417470 LARGE2Q8N3Y3 721 aa21.85■■□□□ 1.09
COMMD3-BMI1-201ENST00000417470 JDP2Q8WYK2 163 aa21.85■■□□□ 1.09
COMMD3-BMI1-201ENST00000417470 PUS3Q9BZE2 481 aaKnown RBP21.85■■□□□ 1.09
COMMD3-BMI1-201ENST00000417470 CCDC88AQ3V6T2 1871 aa21.84■■□□□ 1.09
COMMD3-BMI1-201ENST00000417470 EYA2O00167 538 aa21.84■■□□□ 1.09
COMMD3-BMI1-201ENST00000417470 POLA2Q14181 598 aa21.84■■□□□ 1.09
COMMD3-BMI1-201ENST00000417470 AOC3Q16853 763 aa21.83■■□□□ 1.09
COMMD3-BMI1-201ENST00000417470 LRRC24Q50LG9 513 aa21.83■■□□□ 1.09
COMMD3-BMI1-201ENST00000417470 C15orf52Q6ZUT6 534 aaKnown RBP21.83■■□□□ 1.09
COMMD3-BMI1-201ENST00000417470 KLHDC4Q8TBB5 520 aa21.83■■□□□ 1.09
COMMD3-BMI1-201ENST00000417470 SSH3Q8TE77 659 aa21.83■■□□□ 1.09
COMMD3-BMI1-201ENST00000417470 ZC3H12CQ9C0D7 883 aaKnown RBP21.83■■□□□ 1.09
COMMD3-BMI1-201ENST00000417470 ZNF804BA4D1E1 1349 aa21.82■■□□□ 1.08
COMMD3-BMI1-201ENST00000417470 PNMA6EA0A0J9YXQ4 647 aa21.82■■□□□ 1.08
COMMD3-BMI1-201ENST00000417470 MED23Q9ULK4 1368 aa21.82■■□□□ 1.08
COMMD3-BMI1-201ENST00000417470 SPEF2Q9C093 1822 aa21.81■■□□□ 1.08
COMMD3-BMI1-201ENST00000417470 GLTPD2A6NH11 291 aa21.81■■□□□ 1.08
COMMD3-BMI1-201ENST00000417470 UBE4AQ14139 1066 aa21.81■■□□□ 1.08
COMMD3-BMI1-201ENST00000417470 CEP85Q6P2H3 762 aa21.81■■□□□ 1.08
COMMD3-BMI1-201ENST00000417470 ATG9AQ7Z3C6 839 aa21.81■■□□□ 1.08
COMMD3-BMI1-201ENST00000417470 RPAP2Q8IXW5 612 aaPredicted RBP21.81■■□□□ 1.08
COMMD3-BMI1-201ENST00000417470 NIM1KQ8IY84 436 aa21.81■■□□□ 1.08
COMMD3-BMI1-201ENST00000417470 VGLL2Q8N8G2 317 aa21.81■■□□□ 1.08
COMMD3-BMI1-201ENST00000417470 ZNRF3Q9ULT6 936 aa21.81■■□□□ 1.08
COMMD3-BMI1-201ENST00000417470 COL4A5P29400 1685 aa21.8■■□□□ 1.08
COMMD3-BMI1-201ENST00000417470 TAF5LO75529 589 aa21.8■■□□□ 1.08
COMMD3-BMI1-201ENST00000417470 IL15P40933 162 aaPredicted RBP21.8■■□□□ 1.08
COMMD3-BMI1-201ENST00000417470 DPY19L2Q6NUT2 758 aa21.8■■□□□ 1.08
COMMD3-BMI1-201ENST00000417470 C1orf115Q9H7X2 142 aa21.8■■□□□ 1.08
COMMD3-BMI1-201ENST00000417470 PDE8BO95263 885 aa21.79■■□□□ 1.08
COMMD3-BMI1-201ENST00000417470 HELBQ8NG08 1087 aaPredicted RBP21.79■■□□□ 1.08
COMMD3-BMI1-201ENST00000417470 IRS2Q9Y4H2 1338 aa21.79■■□□□ 1.08
COMMD3-BMI1-201ENST00000417470 WTIPA6NIX2 430 aaPredicted RBP21.78■■□□□ 1.08
COMMD3-BMI1-201ENST00000417470 RIMBP2O15034 1052 aa21.78■■□□□ 1.08
COMMD3-BMI1-201ENST00000417470 KCNJ4P48050 445 aa21.78■■□□□ 1.08
COMMD3-BMI1-201ENST00000417470 METTL24Q5JXM2 366 aa21.78■■□□□ 1.08
COMMD3-BMI1-201ENST00000417470 PA2G4Q9UQ80 394 aaKnown RBP21.78■■□□□ 1.08
COMMD3-BMI1-201ENST00000417470 EIF6P56537 245 aaKnown RBP21.77■■□□□ 1.08
COMMD3-BMI1-201ENST00000417470 PODNQ7Z5L7 613 aa21.77■■□□□ 1.08
COMMD3-BMI1-201ENST00000417470 ZNF784Q8NCA9 323 aaPredicted RBP21.77■■□□□ 1.08
COMMD3-BMI1-201ENST00000417470 GPR101Q96P66 508 aaPredicted RBP21.77■■□□□ 1.08
COMMD3-BMI1-201ENST00000417470 NOP58Q9Y2X3 529 aaKnown RBP21.77■■□□□ 1.08
COMMD3-BMI1-201ENST00000417470 SUPT16HQ9Y5B9 1047 aaKnown RBP21.77■■□□□ 1.08
COMMD3-BMI1-201ENST00000417470 TIAM2Q8IVF5 1701 aa21.77■■□□□ 1.08
COMMD3-BMI1-201ENST00000417470 KDM2BQ8NHM5 1336 aa21.77■■□□□ 1.07
COMMD3-BMI1-201ENST00000417470 AAMPQ13685 434 aa21.76■■□□□ 1.07
COMMD3-BMI1-201ENST00000417470 COA1Q9GZY4 146 aa21.76■■□□□ 1.07
COMMD3-BMI1-201ENST00000417470 SIL1Q9H173 461 aa21.76■■□□□ 1.07
COMMD3-BMI1-201ENST00000417470 A0A1B0GUL6 1792 aa21.76■■□□□ 1.07
COMMD3-BMI1-201ENST00000417470 YDJCA8MPS7 323 aa21.75■■□□□ 1.07
COMMD3-BMI1-201ENST00000417470 FGFR2P21802 821 aa21.75■■□□□ 1.07
COMMD3-BMI1-201ENST00000417470 TXNRD3Q86VQ6 643 aa21.75■■□□□ 1.07
COMMD3-BMI1-201ENST00000417470 GPC2Q8N158 579 aa21.75■■□□□ 1.07
COMMD3-BMI1-201ENST00000417470 CEP126Q9P2H0 1117 aa21.75■■□□□ 1.07
COMMD3-BMI1-201ENST00000417470 SNAP23O00161 211 aa21.74■■□□□ 1.07
COMMD3-BMI1-201ENST00000417470 ECE2O60344 883 aa21.74■■□□□ 1.07
COMMD3-BMI1-201ENST00000417470 CXCL9Q07325 125 aa21.74■■□□□ 1.07
COMMD3-BMI1-201ENST00000417470 G3BP1Q13283 466 aaKnown RBP eCLIP21.74■■□□□ 1.07
COMMD3-BMI1-201ENST00000417470 PUM3Q15397 648 aaKnown RBP21.74■■□□□ 1.07
COMMD3-BMI1-201ENST00000417470 L3MBTL3Q96JM7 780 aaPredicted RBP21.74■■□□□ 1.07
COMMD3-BMI1-201ENST00000417470 DBNDD1Q9H9R9 158 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms