RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 TSPYL6Q8N831 410 aa18.59■□□□□ 0.57
PAF1-202ENST00000416728 BEGAINQ9BUH8 593 aa18.59■□□□□ 0.57
PAF1-202ENST00000416728 ZC3H12CQ9C0D7 883 aaKnown RBP18.59■□□□□ 0.57
PAF1-202ENST00000416728 ZNF408Q9H9D4 720 aa18.59■□□□□ 0.57
PAF1-202ENST00000416728 PODXL2Q9NZ53 605 aa18.59■□□□□ 0.57
PAF1-202ENST00000416728 ANKIB1Q9P2G1 1089 aa18.59■□□□□ 0.57
PAF1-202ENST00000416728 UFL1O94874 794 aa18.58■□□□□ 0.57
PAF1-202ENST00000416728 RPS12P25398 132 aaKnown RBP18.58■□□□□ 0.57
PAF1-202ENST00000416728 JARID2Q92833 1246 aaPredicted RBP18.58■□□□□ 0.57
PAF1-202ENST00000416728 MAP3K2Q9Y2U5 619 aa18.58■□□□□ 0.57
PAF1-202ENST00000416728 G3V3G9 751 aa18.57■□□□□ 0.56
PAF1-202ENST00000416728 DCAF8Q5TAQ9 597 aa18.57■□□□□ 0.56
PAF1-202ENST00000416728 SAMD7Q7Z3H4 446 aa18.57■□□□□ 0.56
PAF1-202ENST00000416728 TSR2Q969E8 191 aaKnown RBP18.57■□□□□ 0.56
PAF1-202ENST00000416728 CCDC85AQ96PX6 553 aaPredicted RBP18.57■□□□□ 0.56
PAF1-202ENST00000416728 STK31Q9BXU1 1019 aa18.57■□□□□ 0.56
PAF1-202ENST00000416728 GGA1Q9UJY5 639 aa18.57■□□□□ 0.56
PAF1-202ENST00000416728 TBC1D10BQ4KMP7 808 aaPredicted RBP18.56■□□□□ 0.56
PAF1-202ENST00000416728 KSR2Q6VAB6 950 aa18.56■□□□□ 0.56
PAF1-202ENST00000416728 HHIPL1Q96JK4 782 aa18.56■□□□□ 0.56
PAF1-202ENST00000416728 KCNQ5Q9NR82 932 aa18.56■□□□□ 0.56
PAF1-202ENST00000416728 RTL9Q8NET4 1388 aa18.56■□□□□ 0.56
PAF1-202ENST00000416728 THSD7BQ9C0I4 1608 aa18.56■□□□□ 0.56
PAF1-202ENST00000416728 TRPM7Q96QT4 1865 aa18.56■□□□□ 0.56
PAF1-202ENST00000416728 PI4KAP2A4QPH2 592 aa18.55■□□□□ 0.56
PAF1-202ENST00000416728 MAP2K2P36507 400 aa18.55■□□□□ 0.56
PAF1-202ENST00000416728 CCDC27Q2M243 656 aa18.55■□□□□ 0.56
PAF1-202ENST00000416728 CCDC184Q52MB2 194 aa18.55■□□□□ 0.56
PAF1-202ENST00000416728 USP48Q86UV5 1035 aa18.55■□□□□ 0.56
PAF1-202ENST00000416728 ANKRD18AQ8IVF6 992 aa18.55■□□□□ 0.56
PAF1-202ENST00000416728 PI4KAP1Q8N8J0 262 aa18.55■□□□□ 0.56
PAF1-202ENST00000416728 AOC2O75106 756 aa18.55■□□□□ 0.56
PAF1-202ENST00000416728 EGFRP00533 1210 aa18.55■□□□□ 0.56
PAF1-202ENST00000416728 NEXNQ0ZGT2 675 aa18.55■□□□□ 0.56
PAF1-202ENST00000416728 WWC1Q8IX03 1113 aa18.55■□□□□ 0.56
PAF1-202ENST00000416728 IGKV5-2P06315 115 aa18.54■□□□□ 0.56
PAF1-202ENST00000416728 VIL1P09327 827 aaKnown RBP18.54■□□□□ 0.56
PAF1-202ENST00000416728 CTSWP56202 376 aa18.54■□□□□ 0.56
PAF1-202ENST00000416728 TWISTNBQ3B726 338 aaPredicted RBP18.54■□□□□ 0.56
PAF1-202ENST00000416728 RBM26Q5T8P6 1007 aaKnown RBP18.54■□□□□ 0.56
PAF1-202ENST00000416728 KRT26Q7Z3Y9 468 aa18.54■□□□□ 0.56
PAF1-202ENST00000416728 CDC5LQ99459 802 aaKnown RBP18.54■□□□□ 0.56
PAF1-202ENST00000416728 XDHP47989 1333 aa18.53■□□□□ 0.56
PAF1-202ENST00000416728 KIF4BQ2VIQ3 1234 aa18.53■□□□□ 0.56
PAF1-202ENST00000416728 DCPSQ96C86 337 aaKnown RBP18.53■□□□□ 0.56
PAF1-202ENST00000416728 ATP2B4P23634 1241 aa18.51■□□□□ 0.55
PAF1-202ENST00000416728 HUNKP57058 714 aa18.51■□□□□ 0.55
PAF1-202ENST00000416728 CWF19L2Q2TBE0 894 aaKnown RBP18.51■□□□□ 0.55
PAF1-202ENST00000416728 DLK2Q6UY11 383 aa18.51■□□□□ 0.55
PAF1-202ENST00000416728 IL16Q14005 1332 aa18.51■□□□□ 0.55
PAF1-202ENST00000416728 NEURL1BA8MQ27 555 aa18.5■□□□□ 0.55
PAF1-202ENST00000416728 ADM5C9JUS6 153 aa18.5■□□□□ 0.55
PAF1-202ENST00000416728 CA12O43570 354 aa18.5■□□□□ 0.55
PAF1-202ENST00000416728 SLC4A2P04920 1241 aa18.5■□□□□ 0.55
PAF1-202ENST00000416728 BRPF1P55201 1214 aaPredicted RBP18.5■□□□□ 0.55
PAF1-202ENST00000416728 RSBN1LQ6PCB5 846 aaPredicted RBP18.5■□□□□ 0.55
PAF1-202ENST00000416728 G2E3Q7L622 706 aa18.5■□□□□ 0.55
PAF1-202ENST00000416728 TTLL11Q8NHH1 800 aa18.5■□□□□ 0.55
PAF1-202ENST00000416728 GGA3Q9NZ52 723 aa18.5■□□□□ 0.55
PAF1-202ENST00000416728 NOGQ13253 232 aa18.49■□□□□ 0.55
PAF1-202ENST00000416728 SULF1Q8IWU6 871 aa18.49■□□□□ 0.55
PAF1-202ENST00000416728 AGBL3Q8NEM8 1001 aa18.49■□□□□ 0.55
PAF1-202ENST00000416728 GREM2Q9H772 168 aa18.49■□□□□ 0.55
PAF1-202ENST00000416728 GBA2Q9HCG7 927 aaPredicted RBP18.49■□□□□ 0.55
PAF1-202ENST00000416728 MRS2Q9HD23 443 aa18.49■□□□□ 0.55
PAF1-202ENST00000416728 BSDC1Q9NW68 430 aaPredicted RBP18.49■□□□□ 0.55
PAF1-202ENST00000416728 TSKSQ9UJT2 592 aa18.49■□□□□ 0.55
PAF1-202ENST00000416728 NCBP3Q53F19 620 aaKnown RBP18.48■□□□□ 0.55
PAF1-202ENST00000416728 UBE3BQ7Z3V4 1068 aa18.48■□□□□ 0.55
PAF1-202ENST00000416728 PODNQ7Z5L7 613 aa18.48■□□□□ 0.55
PAF1-202ENST00000416728 C2orf69Q8N8R5 385 aa18.48■□□□□ 0.55
PAF1-202ENST00000416728 ZNF609O15014 1411 aa18.48■□□□□ 0.55
PAF1-202ENST00000416728 ZNF280AP59817 542 aaPredicted RBP18.47■□□□□ 0.55
PAF1-202ENST00000416728 FLIIQ13045 1269 aa18.47■□□□□ 0.55
PAF1-202ENST00000416728 ABHD8Q96I13 439 aa18.47■□□□□ 0.55
PAF1-202ENST00000416728 MINPP1Q9UNW1 487 aa18.47■□□□□ 0.55
PAF1-202ENST00000416728 USP17L3A6NCW0 530 aa18.46■□□□□ 0.55
PAF1-202ENST00000416728 USP17L4A6NCW7 530 aa18.46■□□□□ 0.55
PAF1-202ENST00000416728 H7C1W4 665 aa18.46■□□□□ 0.55
PAF1-202ENST00000416728 FKBP5Q13451 457 aaPredicted RBP18.46■□□□□ 0.55
PAF1-202ENST00000416728 USP17L1Q7RTZ2 530 aa18.46■□□□□ 0.55
PAF1-202ENST00000416728 FANCIQ9NVI1 1328 aa18.46■□□□□ 0.55
PAF1-202ENST00000416728 MED23Q9ULK4 1368 aa18.46■□□□□ 0.55
PAF1-202ENST00000416728 SCN9AQ15858 1988 aa18.46■□□□□ 0.54
PAF1-202ENST00000416728 USP17L8P0C7I0 530 aa18.45■□□□□ 0.54
PAF1-202ENST00000416728 IGHMBP2P38935 993 aaKnown RBP18.45■□□□□ 0.54
PAF1-202ENST00000416728 GCKRQ14397 625 aa18.45■□□□□ 0.54
PAF1-202ENST00000416728 RGMBQ6NW40 437 aa18.45■□□□□ 0.54
PAF1-202ENST00000416728 GMLQ99445 158 aa18.45■□□□□ 0.54
PAF1-202ENST00000416728 MYH16Q9H6N6 1097 aa18.45■□□□□ 0.54
PAF1-202ENST00000416728 ASTN2O75129 1339 aaPredicted RBP18.45■□□□□ 0.54
PAF1-202ENST00000416728 WTIPA6NIX2 430 aaPredicted RBP18.44■□□□□ 0.54
PAF1-202ENST00000416728 ANP32CO43423 234 aa18.44■□□□□ 0.54
PAF1-202ENST00000416728 CCT4P50991 539 aaKnown RBP18.44■□□□□ 0.54
PAF1-202ENST00000416728 SCARF1Q14162 830 aa18.44■□□□□ 0.54
PAF1-202ENST00000416728 ANGEL2Q5VTE6 544 aaKnown RBP18.44■□□□□ 0.54
PAF1-202ENST00000416728 DNAAF4Q8WXU2 420 aa18.44■□□□□ 0.54
PAF1-202ENST00000416728 MYOZ2Q9NPC6 264 aa18.44■□□□□ 0.54
PAF1-202ENST00000416728 LINS1Q8NG48 757 aa18.43■□□□□ 0.54
PAF1-202ENST00000416728 CCDC102AQ96A19 550 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms