RNA–Protein interactions for RNA: ENST00000416204.1

LINC01238-201, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 590 nt, Biotype lincRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-201ENST00000416204 MKI67P46013 3256 aaKnown RBP12.31□□□□□ -0.44
LINC01238-201ENST00000416204 TCIRG1Q13488 830 aa12.31□□□□□ -0.44
LINC01238-201ENST00000416204 ANGEL2Q5VTE6 544 aaKnown RBP12.31□□□□□ -0.44
LINC01238-201ENST00000416204 MAPK8IP3Q9UPT6 1336 aa12.31□□□□□ -0.44
LINC01238-201ENST00000416204 POLR2AP24928 1970 aaKnown RBP12.3□□□□□ -0.44
LINC01238-201ENST00000416204 SCARF1Q14162 830 aa12.3□□□□□ -0.44
LINC01238-201ENST00000416204 HSP90AB3PQ58FF7 597 aa12.3□□□□□ -0.44
LINC01238-201ENST00000416204 TBC1D16Q8TBP0 767 aa12.3□□□□□ -0.44
LINC01238-201ENST00000416204 ZNF296Q8WUU4 475 aaPredicted RBP12.3□□□□□ -0.44
LINC01238-201ENST00000416204 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.3□□□□□ -0.44
LINC01238-201ENST00000416204 HDAC9Q9UKV0 1011 aa12.3□□□□□ -0.44
LINC01238-201ENST00000416204 ANKRD36CQ5JPF3 1778 aa12.29□□□□□ -0.44
LINC01238-201ENST00000416204 UBE2Q2LH0YL09 131 aa12.29□□□□□ -0.44
LINC01238-201ENST00000416204 RPS12P25398 132 aaKnown RBP12.29□□□□□ -0.44
LINC01238-201ENST00000416204 CHPF2Q9P2E5 772 aa12.29□□□□□ -0.44
LINC01238-201ENST00000416204 G3V3G9 751 aa12.28□□□□□ -0.44
LINC01238-201ENST00000416204 UFL1O94874 794 aa12.28□□□□□ -0.44
LINC01238-201ENST00000416204 RIPK4P57078 832 aa12.28□□□□□ -0.44
LINC01238-201ENST00000416204 DCAF8Q5TAQ9 597 aa12.28□□□□□ -0.44
LINC01238-201ENST00000416204 CCDC85AQ96PX6 553 aaPredicted RBP12.28□□□□□ -0.44
LINC01238-201ENST00000416204 EYA3Q99504 573 aa12.28□□□□□ -0.44
LINC01238-201ENST00000416204 SEC31BQ9NQW1 1179 aa12.28□□□□□ -0.44
LINC01238-201ENST00000416204 LAS1LQ9Y4W2 734 aaKnown RBP12.28□□□□□ -0.44
LINC01238-201ENST00000416204 LRRC37AA6NMS7 1700 aa12.28□□□□□ -0.44
LINC01238-201ENST00000416204 HTTP42858 3142 aa12.27□□□□□ -0.44
LINC01238-201ENST00000416204 VIL1P09327 827 aaKnown RBP12.27□□□□□ -0.45
LINC01238-201ENST00000416204 TTLL12Q14166 644 aaPredicted RBP12.27□□□□□ -0.45
LINC01238-201ENST00000416204 TMC4Q7Z404 712 aa12.27□□□□□ -0.45
LINC01238-201ENST00000416204 JARID2Q92833 1246 aaPredicted RBP12.27□□□□□ -0.45
LINC01238-201ENST00000416204 ZC3H12CQ9C0D7 883 aaKnown RBP12.27□□□□□ -0.45
LINC01238-201ENST00000416204 R3HDMLQ9H3Y0 253 aa12.27□□□□□ -0.45
LINC01238-201ENST00000416204 ANKIB1Q9P2G1 1089 aa12.27□□□□□ -0.45
LINC01238-201ENST00000416204 CENPFP49454 3210 aa12.27□□□□□ -0.45
LINC01238-201ENST00000416204 AKAP11Q9UKA4 1901 aa12.27□□□□□ -0.45
LINC01238-201ENST00000416204 DDX60Q8IY21 1712 aaKnown RBP12.26□□□□□ -0.45
LINC01238-201ENST00000416204 WTIPA6NIX2 430 aaPredicted RBP12.26□□□□□ -0.45
LINC01238-201ENST00000416204 PRKG1Q13976 671 aa12.26□□□□□ -0.45
LINC01238-201ENST00000416204 NEUROD2Q15784 382 aa12.26□□□□□ -0.45
LINC01238-201ENST00000416204 MXD3Q9BW11 206 aa12.26□□□□□ -0.45
LINC01238-201ENST00000416204 SCN9AQ15858 1988 aa12.26□□□□□ -0.45
LINC01238-201ENST00000416204 IRS4O14654 1257 aaPredicted RBP12.25□□□□□ -0.45
LINC01238-201ENST00000416204 RPS8P62241 208 aaKnown RBP12.25□□□□□ -0.45
LINC01238-201ENST00000416204 SF3B3Q15393 1217 aaKnown RBP12.25□□□□□ -0.45
LINC01238-201ENST00000416204 RSBN1LQ6PCB5 846 aaPredicted RBP12.25□□□□□ -0.45
LINC01238-201ENST00000416204 FBXW7Q969H0 707 aa12.25□□□□□ -0.45
LINC01238-201ENST00000416204 MYOZ2Q9NPC6 264 aa12.25□□□□□ -0.45
LINC01238-201ENST00000416204 ZNF280AP59817 542 aaPredicted RBP12.24□□□□□ -0.45
LINC01238-201ENST00000416204 NBPF9Q3BBW0 867 aa12.24□□□□□ -0.45
LINC01238-201ENST00000416204 CCDC146Q8IYE0 955 aa12.24□□□□□ -0.45
LINC01238-201ENST00000416204 ISCA1Q9BUE6 129 aa12.24□□□□□ -0.45
LINC01238-201ENST00000416204 GGA1Q9UJY5 639 aa12.24□□□□□ -0.45
LINC01238-201ENST00000416204 FZD1Q9UP38 647 aa12.24□□□□□ -0.45
LINC01238-201ENST00000416204 BRCA2P51587 3418 aa12.23□□□□□ -0.45
LINC01238-201ENST00000416204 GPR25O00155 361 aa12.23□□□□□ -0.45
LINC01238-201ENST00000416204 USP17L8P0C7I0 530 aa12.23□□□□□ -0.45
LINC01238-201ENST00000416204 HDGFL1Q5TGJ6 251 aa12.23□□□□□ -0.45
LINC01238-201ENST00000416204 ANKRD13DQ6ZTN6 518 aa12.23□□□□□ -0.45
LINC01238-201ENST00000416204 PLBD2Q8NHP8 589 aa12.23□□□□□ -0.45
LINC01238-201ENST00000416204 PAPPA2Q9BXP8 1791 aa12.23□□□□□ -0.45
LINC01238-201ENST00000416204 PKN2Q16513 984 aaKnown RBP12.22□□□□□ -0.45
LINC01238-201ENST00000416204 POTEFA5A3E0 1075 aa12.21□□□□□ -0.45
LINC01238-201ENST00000416204 SASH1O94885 1247 aa12.21□□□□□ -0.45
LINC01238-201ENST00000416204 TMPOP42166 694 aaKnown RBP12.21□□□□□ -0.45
LINC01238-201ENST00000416204 FKBP1BP68106 108 aa12.21□□□□□ -0.45
LINC01238-201ENST00000416204 HABP4Q5JVS0 413 aaKnown RBP12.21□□□□□ -0.45
LINC01238-201ENST00000416204 FBXO46Q6PJ61 603 aaPredicted RBP12.21□□□□□ -0.45
LINC01238-201ENST00000416204 REM2Q8IYK8 340 aaPredicted RBP12.21□□□□□ -0.45
LINC01238-201ENST00000416204 AGBL3Q8NEM8 1001 aa12.21□□□□□ -0.45
LINC01238-201ENST00000416204 GMLQ99445 158 aa12.21□□□□□ -0.45
LINC01238-201ENST00000416204 PODXL2Q9NZ53 605 aa12.21□□□□□ -0.45
LINC01238-201ENST00000416204 USP17L3A6NCW0 530 aa12.2□□□□□ -0.46
LINC01238-201ENST00000416204 USP17L4A6NCW7 530 aa12.2□□□□□ -0.46
LINC01238-201ENST00000416204 FKTNO75072 461 aa12.2□□□□□ -0.46
LINC01238-201ENST00000416204 PTPN12Q05209 780 aaKnown RBP12.2□□□□□ -0.46
LINC01238-201ENST00000416204 USP17L1Q7RTZ2 530 aa12.2□□□□□ -0.46
LINC01238-201ENST00000416204 MYD88Q99836 296 aa12.2□□□□□ -0.46
LINC01238-201ENST00000416204 PNNQ9H307 717 aaKnown RBP12.2□□□□□ -0.46
LINC01238-201ENST00000416204 TM4SF4P48230 202 aa12.19□□□□□ -0.46
LINC01238-201ENST00000416204 RIC3Q7Z5B4 369 aa12.19□□□□□ -0.46
LINC01238-201ENST00000416204 PITPNM2Q9BZ72 1349 aa12.18□□□□□ -0.46
LINC01238-201ENST00000416204 CHL1O00533 1208 aa12.18□□□□□ -0.46
LINC01238-201ENST00000416204 ZBTB38Q8NAP3 1195 aaPredicted RBP12.18□□□□□ -0.46
LINC01238-201ENST00000416204 PHAXQ9H814 394 aaKnown RBP12.18□□□□□ -0.46
LINC01238-201ENST00000416204 BABAM1Q9NWV8 329 aa12.18□□□□□ -0.46
LINC01238-201ENST00000416204 DBF4Q9UBU7 674 aaPredicted RBP12.18□□□□□ -0.46
LINC01238-201ENST00000416204 TRIM17Q9Y577 477 aa12.18□□□□□ -0.46
LINC01238-201ENST00000416204 XDHP47989 1333 aa12.17□□□□□ -0.46
LINC01238-201ENST00000416204 ELL2O00472 640 aaPredicted RBP12.17□□□□□ -0.46
LINC01238-201ENST00000416204 WNT10BO00744 389 aa12.17□□□□□ -0.46
LINC01238-201ENST00000416204 LMOD3Q0VAK6 560 aa12.17□□□□□ -0.46
LINC01238-201ENST00000416204 SREBF2Q12772 1141 aa12.17□□□□□ -0.46
LINC01238-201ENST00000416204 CCDC152Q4G0S7 254 aa12.17□□□□□ -0.46
LINC01238-201ENST00000416204 DUSP27Q5VZP5 1158 aa12.17□□□□□ -0.46
LINC01238-201ENST00000416204 ANKRD18AQ8IVF6 992 aa12.17□□□□□ -0.46
LINC01238-201ENST00000416204 ANGEL1Q9UNK9 670 aaKnown RBP12.17□□□□□ -0.46
LINC01238-201ENST00000416204 KLRK1P26718 216 aa12.16□□□□□ -0.46
LINC01238-201ENST00000416204 NF2P35240 595 aa12.16□□□□□ -0.46
LINC01238-201ENST00000416204 GOLGA2Q08379 1002 aa12.16□□□□□ -0.46
LINC01238-201ENST00000416204 DACT2Q5SW24 774 aa12.16□□□□□ -0.46
LINC01238-201ENST00000416204 SPRYD7Q5W111 196 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms