RNA–Protein interactions for RNA: ENST00000415409.5

HDAC8-211, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 913 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-211ENST00000415409 ONECUT3O60422 494 aaPredicted RBP8.16□□□□□ -1.1
HDAC8-211ENST00000415409 TRIM28Q13263 835 aaKnown RBP8.16□□□□□ -1.1
HDAC8-211ENST00000415409 G3BP1Q13283 466 aaKnown RBP eCLIP8.16□□□□□ -1.1
HDAC8-211ENST00000415409 TTC22Q5TAA0 569 aa8.16□□□□□ -1.1
HDAC8-211ENST00000415409 IFFO2Q5TF58 517 aa8.16□□□□□ -1.1
HDAC8-211ENST00000415409 UBE3BQ7Z3V4 1068 aa8.16□□□□□ -1.1
HDAC8-211ENST00000415409 C16orf71Q8IYS4 520 aaPredicted RBP8.16□□□□□ -1.1
HDAC8-211ENST00000415409 RHPN1Q8TCX5 695 aa8.16□□□□□ -1.1
HDAC8-211ENST00000415409 DDRGK1Q96HY6 314 aa8.16□□□□□ -1.1
HDAC8-211ENST00000415409 CCDC87Q9NVE4 849 aa8.16□□□□□ -1.1
HDAC8-211ENST00000415409 WDR70Q9NW82 654 aa8.16□□□□□ -1.1
HDAC8-211ENST00000415409 NOP58Q9Y2X3 529 aaKnown RBP8.16□□□□□ -1.1
HDAC8-211ENST00000415409 NRAPQ86VF7 1730 aa8.15□□□□□ -1.1
HDAC8-211ENST00000415409 COL15A1P39059 1388 aa8.15□□□□□ -1.1
HDAC8-211ENST00000415409 PALLDQ8WX93 1383 aa8.15□□□□□ -1.1
HDAC8-211ENST00000415409 MAP3K15Q6ZN16 1313 aa8.15□□□□□ -1.1
HDAC8-211ENST00000415409 ERVV-1B6SEH8 477 aa8.15□□□□□ -1.1
HDAC8-211ENST00000415409 KCNQ2O43526 872 aa8.15□□□□□ -1.1
HDAC8-211ENST00000415409 CDC45O75419 566 aa8.15□□□□□ -1.1
HDAC8-211ENST00000415409 CASC1Q6TDU7 716 aa8.15□□□□□ -1.1
HDAC8-211ENST00000415409 GIGYF2Q6Y7W6 1299 aaKnown RBP8.15□□□□□ -1.1
HDAC8-211ENST00000415409 ISCA1Q9BUE6 129 aa8.15□□□□□ -1.1
HDAC8-211ENST00000415409 OSBPL3Q9H4L5 887 aa8.15□□□□□ -1.1
HDAC8-211ENST00000415409 ZBTB1Q9Y2K1 713 aa8.15□□□□□ -1.1
HDAC8-211ENST00000415409 GLI3P10071 1580 aa8.14□□□□□ -1.11
HDAC8-211ENST00000415409 AOX1Q06278 1338 aa8.14□□□□□ -1.11
HDAC8-211ENST00000415409 MX1P20591 662 aa8.14□□□□□ -1.11
HDAC8-211ENST00000415409 CRKLP46109 303 aaKnown RBP8.14□□□□□ -1.11
HDAC8-211ENST00000415409 PDE1AP54750 535 aa8.14□□□□□ -1.11
HDAC8-211ENST00000415409 EN1Q05925 392 aaPredicted RBP8.14□□□□□ -1.11
HDAC8-211ENST00000415409 RABL6Q3YEC7 729 aaPredicted RBP8.14□□□□□ -1.11
HDAC8-211ENST00000415409 PAXIP1Q6ZW49 1069 aaPredicted RBP8.14□□□□□ -1.11
HDAC8-211ENST00000415409 DZIP3Q86Y13 1208 aaKnown RBP8.14□□□□□ -1.11
HDAC8-211ENST00000415409 SEPT12Q8IYM1 358 aa8.14□□□□□ -1.11
HDAC8-211ENST00000415409 CLASRPQ8N2M8 674 aaKnown RBP8.14□□□□□ -1.11
HDAC8-211ENST00000415409 OTUD7AQ8TE49 926 aaPredicted RBP8.14□□□□□ -1.11
HDAC8-211ENST00000415409 GPATCH3Q96I76 525 aa8.14□□□□□ -1.11
HDAC8-211ENST00000415409 KAZALD1Q96I82 304 aa8.14□□□□□ -1.11
HDAC8-211ENST00000415409 IPO9Q96P70 1041 aaKnown RBP8.14□□□□□ -1.11
HDAC8-211ENST00000415409 STAP2Q9UGK3 403 aa8.14□□□□□ -1.11
HDAC8-211ENST00000415409 SPDYE16A6NNV3 312 aaPredicted RBP8.13□□□□□ -1.11
HDAC8-211ENST00000415409 RGS20O76081 388 aa8.13□□□□□ -1.11
HDAC8-211ENST00000415409 PCCAP05165 728 aaPredicted RBP8.13□□□□□ -1.11
HDAC8-211ENST00000415409 GSPT1P15170 499 aaKnown RBP8.13□□□□□ -1.11
HDAC8-211ENST00000415409 EIF5P55010 431 aaKnown RBP8.13□□□□□ -1.11
HDAC8-211ENST00000415409 CASP7P55210 303 aa8.13□□□□□ -1.11
HDAC8-211ENST00000415409 ITPK1Q13572 414 aa8.13□□□□□ -1.11
HDAC8-211ENST00000415409 INTS5Q6P9B9 1019 aaKnown RBP8.13□□□□□ -1.11
HDAC8-211ENST00000415409 LMBR1LQ6UX01 489 aa8.13□□□□□ -1.11
HDAC8-211ENST00000415409 NYAP1Q6ZVC0 841 aa8.13□□□□□ -1.11
HDAC8-211ENST00000415409 PACS2Q86VP3 889 aa8.13□□□□□ -1.11
HDAC8-211ENST00000415409 JARID2Q92833 1246 aaPredicted RBP8.13□□□□□ -1.11
HDAC8-211ENST00000415409 LRCH3Q96II8 777 aa8.13□□□□□ -1.11
HDAC8-211ENST00000415409 IL1RAPL2Q9NP60 686 aa8.13□□□□□ -1.11
HDAC8-211ENST00000415409 PA2G4Q9UQ80 394 aaKnown RBP8.13□□□□□ -1.11
HDAC8-211ENST00000415409 PAPPAQ13219 1627 aa8.13□□□□□ -1.11
HDAC8-211ENST00000415409 SHANK3Q9BYB0 1731 aa8.12□□□□□ -1.11
HDAC8-211ENST00000415409 ERC2O15083 957 aa8.12□□□□□ -1.11
HDAC8-211ENST00000415409 IFIT2P09913 472 aaKnown RBP8.12□□□□□ -1.11
HDAC8-211ENST00000415409 SDSP20132 328 aa8.12□□□□□ -1.11
HDAC8-211ENST00000415409 MFAP1P55081 439 aaKnown RBP8.12□□□□□ -1.11
HDAC8-211ENST00000415409 E2F4Q16254 413 aa8.12□□□□□ -1.11
HDAC8-211ENST00000415409 TSR1Q2NL82 804 aaKnown RBP8.12□□□□□ -1.11
HDAC8-211ENST00000415409 EPHA10Q5JZY3 1008 aa8.12□□□□□ -1.11
HDAC8-211ENST00000415409 ZBTB38Q8NAP3 1195 aaPredicted RBP8.12□□□□□ -1.11
HDAC8-211ENST00000415409 COPRSQ9NQ92 184 aa8.12□□□□□ -1.11
HDAC8-211ENST00000415409 WBP1LQ9NX94 342 aa8.12□□□□□ -1.11
HDAC8-211ENST00000415409 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.12□□□□□ -1.11
HDAC8-211ENST00000415409 TBC1D2BQ9UPU7 963 aa8.12□□□□□ -1.11
HDAC8-211ENST00000415409 CHMP3Q9Y3E7 222 aa8.12□□□□□ -1.11
HDAC8-211ENST00000415409 EP400Q96L91 3159 aa8.12□□□□□ -1.11
HDAC8-211ENST00000415409 TOGARAM1Q9Y4F4 1720 aa8.12□□□□□ -1.11
HDAC8-211ENST00000415409 C5P01031 1676 aa8.11□□□□□ -1.11
HDAC8-211ENST00000415409 SALL3Q9BXA9 1300 aa8.11□□□□□ -1.11
HDAC8-211ENST00000415409 GRXCR2A6NFK2 248 aa8.11□□□□□ -1.11
HDAC8-211ENST00000415409 HSP90B1P14625 803 aaKnown RBP8.11□□□□□ -1.11
HDAC8-211ENST00000415409 FOXO4P98177 505 aa8.11□□□□□ -1.11
HDAC8-211ENST00000415409 HLFQ16534 295 aa8.11□□□□□ -1.11
HDAC8-211ENST00000415409 RTL5Q5HYW3 569 aaPredicted RBP8.11□□□□□ -1.11
HDAC8-211ENST00000415409 TBC1D9Q6ZT07 1266 aa8.11□□□□□ -1.11
HDAC8-211ENST00000415409 NLRP10Q86W26 655 aa8.11□□□□□ -1.11
HDAC8-211ENST00000415409 NUTM1Q86Y26 1132 aa8.11□□□□□ -1.11
HDAC8-211ENST00000415409 TBC1D32Q96NH3 1257 aa8.11□□□□□ -1.11
HDAC8-211ENST00000415409 SIL1Q9H173 461 aa8.11□□□□□ -1.11
HDAC8-211ENST00000415409 TRMT112Q9UI30 125 aaKnown RBP8.11□□□□□ -1.11
HDAC8-211ENST00000415409 HPS5Q9UPZ3 1129 aa8.11□□□□□ -1.11
HDAC8-211ENST00000415409 ZNF652Q9Y2D9 606 aa8.11□□□□□ -1.11
HDAC8-211ENST00000415409 TTC41PQ6P2S7 1318 aa8.1□□□□□ -1.11
HDAC8-211ENST00000415409 CDHR2Q9BYE9 1310 aa8.1□□□□□ -1.11
HDAC8-211ENST00000415409 CNTNAP4Q9C0A0 1308 aa8.1□□□□□ -1.11
HDAC8-211ENST00000415409 USP42Q9H9J4 1324 aaKnown RBP8.1□□□□□ -1.11
HDAC8-211ENST00000415409 GLRX3O76003 335 aaKnown RBP8.1□□□□□ -1.11
HDAC8-211ENST00000415409 GPTP24298 496 aa8.1□□□□□ -1.11
HDAC8-211ENST00000415409 HMGB2P26583 209 aaKnown RBP8.1□□□□□ -1.11
HDAC8-211ENST00000415409 RFX5P48382 616 aaPredicted RBP8.1□□□□□ -1.11
HDAC8-211ENST00000415409 PTPN12Q05209 780 aaKnown RBP8.1□□□□□ -1.11
HDAC8-211ENST00000415409 CCDC57Q2TAC2 916 aa8.1□□□□□ -1.11
HDAC8-211ENST00000415409 PARP10Q53GL7 1025 aa8.1□□□□□ -1.11
HDAC8-211ENST00000415409 RC3H1Q5TC82 1133 aaKnown RBP8.1□□□□□ -1.11
HDAC8-211ENST00000415409 FAM196AQ6ZSG2 479 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms