RNA–Protein interactions for RNA: ENST00000414487.6

SNRPE-202, Transcript of small nuclear ribonucleoprotein polypeptide E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPE, Length 942 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPE-202ENST00000414487 USPL1Q5W0Q7 1092 aa11.06□□□□□ -0.64
SNRPE-202ENST00000414487 CADPS2Q86UW7 1296 aa11.06□□□□□ -0.64
SNRPE-202ENST00000414487 PLBD2Q8NHP8 589 aa11.06□□□□□ -0.64
SNRPE-202ENST00000414487 BOLA2Q9H3K6 86 aa11.06□□□□□ -0.64
SNRPE-202ENST00000414487 NOL7Q9UMY1 257 aaKnown RBP11.06□□□□□ -0.64
SNRPE-202ENST00000414487 CNPY2Q9Y2B0 182 aa11.06□□□□□ -0.64
SNRPE-202ENST00000414487 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.06□□□□□ -0.64
SNRPE-202ENST00000414487 FPGT-TNNI3KV9GXZ4 949 aa11.06□□□□□ -0.64
SNRPE-202ENST00000414487 AFDNP55196 1824 aaKnown RBP11.05□□□□□ -0.64
SNRPE-202ENST00000414487 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.05□□□□□ -0.64
SNRPE-202ENST00000414487 ZNF500O60304 480 aaPredicted RBP11.05□□□□□ -0.64
SNRPE-202ENST00000414487 OFD1O75665 1012 aa11.05□□□□□ -0.64
SNRPE-202ENST00000414487 TPM2P07951 284 aa11.05□□□□□ -0.64
SNRPE-202ENST00000414487 PDCP20941 246 aa11.05□□□□□ -0.64
SNRPE-202ENST00000414487 RPS6KB1P23443 525 aa11.05□□□□□ -0.64
SNRPE-202ENST00000414487 CABP4P57796 275 aa11.05□□□□□ -0.64
SNRPE-202ENST00000414487 PTPN12Q05209 780 aaKnown RBP11.05□□□□□ -0.64
SNRPE-202ENST00000414487 BLOC1S2Q6QNY1 142 aa11.05□□□□□ -0.64
SNRPE-202ENST00000414487 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.05□□□□□ -0.64
SNRPE-202ENST00000414487 ZFP91Q96JP5 570 aaPredicted RBP11.05□□□□□ -0.64
SNRPE-202ENST00000414487 SIL1Q9H173 461 aa11.05□□□□□ -0.64
SNRPE-202ENST00000414487 GDPD2Q9HCC8 539 aa11.05□□□□□ -0.64
SNRPE-202ENST00000414487 USP16Q9Y5T5 823 aa11.05□□□□□ -0.64
SNRPE-202ENST00000414487 STRCP1A6NGW2 1772 aa11.04□□□□□ -0.64
SNRPE-202ENST00000414487 TAF5LO75529 589 aa11.04□□□□□ -0.64
SNRPE-202ENST00000414487 TERF1P54274 439 aa11.04□□□□□ -0.64
SNRPE-202ENST00000414487 ME3Q16798 604 aa11.04□□□□□ -0.64
SNRPE-202ENST00000414487 HAUS7Q99871 368 aa11.04□□□□□ -0.64
SNRPE-202ENST00000414487 GPR108Q9NPR9 543 aa11.04□□□□□ -0.64
SNRPE-202ENST00000414487 DBNLQ9UJU6 430 aaKnown RBP11.04□□□□□ -0.64
SNRPE-202ENST00000414487 TPCN1Q9ULQ1 816 aa11.04□□□□□ -0.64
SNRPE-202ENST00000414487 ZKSCAN5Q9Y2L8 839 aa11.04□□□□□ -0.64
SNRPE-202ENST00000414487 UBR2Q8IWV8 1755 aa11.03□□□□□ -0.64
SNRPE-202ENST00000414487 PAPPAQ13219 1627 aa11.03□□□□□ -0.64
SNRPE-202ENST00000414487 TFCP2Q12800 502 aa11.03□□□□□ -0.64
SNRPE-202ENST00000414487 UBE3BQ7Z3V4 1068 aa11.03□□□□□ -0.64
SNRPE-202ENST00000414487 MARVELD3Q96A59 401 aa11.03□□□□□ -0.64
SNRPE-202ENST00000414487 NUP188Q5SRE5 1749 aa11.03□□□□□ -0.64
SNRPE-202ENST00000414487 PALLDQ8WX93 1383 aa11.03□□□□□ -0.64
SNRPE-202ENST00000414487 A0A087WZG4 1122 aa11.02□□□□□ -0.65
SNRPE-202ENST00000414487 G3V3G9 751 aa11.02□□□□□ -0.65
SNRPE-202ENST00000414487 H7C1W4 665 aa11.02□□□□□ -0.65
SNRPE-202ENST00000414487 FOXD4L6Q3SYB3 417 aaPredicted RBP11.02□□□□□ -0.65
SNRPE-202ENST00000414487 FOXD4L3Q6VB84 417 aaPredicted RBP11.02□□□□□ -0.65
SNRPE-202ENST00000414487 KLHDC4Q8TBB5 520 aa11.02□□□□□ -0.65
SNRPE-202ENST00000414487 LARP6Q9BRS8 491 aaKnown RBP11.02□□□□□ -0.65
SNRPE-202ENST00000414487 ELP1O95163 1332 aa11.02□□□□□ -0.65
SNRPE-202ENST00000414487 SH3TC1Q8TE82 1336 aa11.02□□□□□ -0.65
SNRPE-202ENST00000414487 PCDH11XQ9BZA7 1347 aa11.02□□□□□ -0.65
SNRPE-202ENST00000414487 PCDH11YQ9BZA8 1340 aa11.02□□□□□ -0.65
SNRPE-202ENST00000414487 ZNF609O15014 1411 aa11.01□□□□□ -0.65
SNRPE-202ENST00000414487 TNS2Q63HR2 1409 aa11.01□□□□□ -0.65
SNRPE-202ENST00000414487 TJP1Q07157 1748 aa11.01□□□□□ -0.65
SNRPE-202ENST00000414487 KCPQ6ZWJ8 1503 aa11.01□□□□□ -0.65
SNRPE-202ENST00000414487 VPS37CA5D8V6 355 aaPredicted RBP11.01□□□□□ -0.65
SNRPE-202ENST00000414487 ERVV-2B6SEH9 535 aa11.01□□□□□ -0.65
SNRPE-202ENST00000414487 FIBPO43427 364 aa11.01□□□□□ -0.65
SNRPE-202ENST00000414487 FOXO4P98177 505 aa11.01□□□□□ -0.65
SNRPE-202ENST00000414487 TOB2Q14106 344 aaPredicted RBP11.01□□□□□ -0.65
SNRPE-202ENST00000414487 NKX1-1Q15270 411 aaPredicted RBP11.01□□□□□ -0.65
SNRPE-202ENST00000414487 CHRNA2Q15822 529 aa11.01□□□□□ -0.65
SNRPE-202ENST00000414487 ZNF589Q86UQ0 364 aaPredicted RBP11.01□□□□□ -0.65
SNRPE-202ENST00000414487 NECAB1Q8N987 351 aa11.01□□□□□ -0.65
SNRPE-202ENST00000414487 RNF214Q8ND24 703 aa11.01□□□□□ -0.65
SNRPE-202ENST00000414487 DBNDD2Q9BQY9 259 aa11.01□□□□□ -0.65
SNRPE-202ENST00000414487 WDR17Q8IZU2 1322 aa11.01□□□□□ -0.65
SNRPE-202ENST00000414487 SPEF2Q9C093 1822 aa11□□□□□ -0.65
SNRPE-202ENST00000414487 NBPF26B4DH59 902 aa11□□□□□ -0.65
SNRPE-202ENST00000414487 KRT85P78386 507 aa11□□□□□ -0.65
SNRPE-202ENST00000414487 DNM1Q05193 864 aaKnown RBP11□□□□□ -0.65
SNRPE-202ENST00000414487 MCMDC2Q4G0Z9 681 aa11□□□□□ -0.65
SNRPE-202ENST00000414487 NBPF14Q5TI25 921 aa11□□□□□ -0.65
SNRPE-202ENST00000414487 LARP1BQ659C4 914 aaKnown RBP11□□□□□ -0.65
SNRPE-202ENST00000414487 NBPF10Q6P3W6 841 aaKnown RBP11□□□□□ -0.65
SNRPE-202ENST00000414487 NBPF15Q8N660 670 aa11□□□□□ -0.65
SNRPE-202ENST00000414487 KBTBD3Q8NAB2 608 aa11□□□□□ -0.65
SNRPE-202ENST00000414487 CABLES1Q8TDN4 633 aa11□□□□□ -0.65
SNRPE-202ENST00000414487 DDX17Q92841 729 aaKnown RBP11□□□□□ -0.65
SNRPE-202ENST00000414487 FUCA2Q9BTY2 467 aa11□□□□□ -0.65
SNRPE-202ENST00000414487 CWC25Q9NXE8 425 aaPredicted RBP11□□□□□ -0.65
SNRPE-202ENST00000414487 ATP5J2-PTCD1G3V325 749 aa10.99□□□□□ -0.65
SNRPE-202ENST00000414487 PTCD1O75127 700 aaKnown RBP10.99□□□□□ -0.65
SNRPE-202ENST00000414487 CIAO1O76071 339 aa10.99□□□□□ -0.65
SNRPE-202ENST00000414487 IL15P40933 162 aaPredicted RBP10.99□□□□□ -0.65
SNRPE-202ENST00000414487 LMBR1LQ6UX01 489 aa10.99□□□□□ -0.65
SNRPE-202ENST00000414487 CCDC191Q8NCU4 936 aa10.99□□□□□ -0.65
SNRPE-202ENST00000414487 ZCRB1Q8TBF4 217 aaKnown RBP10.99□□□□□ -0.65
SNRPE-202ENST00000414487 DDX54Q8TDD1 881 aaKnown RBP10.99□□□□□ -0.65
SNRPE-202ENST00000414487 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.99□□□□□ -0.65
SNRPE-202ENST00000414487 MS4A4AQ96JQ5 239 aa10.99□□□□□ -0.65
SNRPE-202ENST00000414487 NEK1Q96PY6 1258 aa10.99□□□□□ -0.65
SNRPE-202ENST00000414487 HELLSQ9NRZ9 838 aa10.99□□□□□ -0.65
SNRPE-202ENST00000414487 ATG3Q9NT62 314 aa10.99□□□□□ -0.65
SNRPE-202ENST00000414487 PTMAP06454 111 aaKnown RBP10.98□□□□□ -0.65
SNRPE-202ENST00000414487 HMGB1P09429 215 aaKnown RBP10.98□□□□□ -0.65
SNRPE-202ENST00000414487 ATG9AQ7Z3C6 839 aa10.98□□□□□ -0.65
SNRPE-202ENST00000414487 JARID2Q92833 1246 aaPredicted RBP10.98□□□□□ -0.65
SNRPE-202ENST00000414487 GTF3C6Q969F1 213 aa10.98□□□□□ -0.65
SNRPE-202ENST00000414487 EDC3Q96F86 508 aaKnown RBP10.98□□□□□ -0.65
SNRPE-202ENST00000414487 LLPHQ9BRT6 129 aaKnown RBP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms