RNA–Protein interactions for RNA: ENST00000414407.1

LINC00398-201, long intergenic non-protein coding RNA 398, humanhuman

TSL 2 BASIC

Gene LINC00398, Length 906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00398-201ENST00000414407 GPSM2P81274 684 aa20.59■□□□□ 0.89
LINC00398-201ENST00000414407 C20orf194Q5TEA3 1177 aa20.59■□□□□ 0.89
LINC00398-201ENST00000414407 LDHAL6AQ6ZMR3 332 aa20.59■□□□□ 0.89
LINC00398-201ENST00000414407 ANKRD2Q9GZV1 360 aa20.59■□□□□ 0.89
LINC00398-201ENST00000414407 RNF181Q9P0P0 153 aa20.59■□□□□ 0.89
LINC00398-201ENST00000414407 SBF1O95248 1867 aa20.58■□□□□ 0.89
LINC00398-201ENST00000414407 XDHP47989 1333 aa20.58■□□□□ 0.89
LINC00398-201ENST00000414407 IARSP41252 1262 aaKnown RBP20.58■□□□□ 0.89
LINC00398-201ENST00000414407 RFX5P48382 616 aaPredicted RBP20.58■□□□□ 0.89
LINC00398-201ENST00000414407 ZNF277Q9NRM2 450 aaPredicted RBP20.58■□□□□ 0.89
LINC00398-201ENST00000414407 ANKIB1Q9P2G1 1089 aa20.58■□□□□ 0.89
LINC00398-201ENST00000414407 ZNF594Q96JF6 807 aaPredicted RBP20.57■□□□□ 0.88
LINC00398-201ENST00000414407 GGA1Q9UJY5 639 aa20.57■□□□□ 0.88
LINC00398-201ENST00000414407 FBXO3Q9UK99 471 aa20.57■□□□□ 0.88
LINC00398-201ENST00000414407 LTBP1Q14766 1721 aa20.56■□□□□ 0.88
LINC00398-201ENST00000414407 ATP2B4P23634 1241 aa20.56■□□□□ 0.88
LINC00398-201ENST00000414407 TBC1D16Q8TBP0 767 aa20.56■□□□□ 0.88
LINC00398-201ENST00000414407 EYA3Q99504 573 aa20.56■□□□□ 0.88
LINC00398-201ENST00000414407 CNNM1Q9NRU3 951 aa20.56■□□□□ 0.88
LINC00398-201ENST00000414407 ZBTB40Q9NUA8 1239 aa20.56■□□□□ 0.88
LINC00398-201ENST00000414407 POLLQ9UGP5 575 aa20.56■□□□□ 0.88
LINC00398-201ENST00000414407 DUOX1Q9NRD9 1551 aa20.55■□□□□ 0.88
LINC00398-201ENST00000414407 SRGAP3O43295 1099 aa20.55■□□□□ 0.88
LINC00398-201ENST00000414407 YY1P25490 414 aa20.55■□□□□ 0.88
LINC00398-201ENST00000414407 PTPN12Q05209 780 aaKnown RBP20.55■□□□□ 0.88
LINC00398-201ENST00000414407 CHRNDQ07001 517 aa20.55■□□□□ 0.88
LINC00398-201ENST00000414407 KIAA2012Q0VF49 1180 aa20.55■□□□□ 0.88
LINC00398-201ENST00000414407 LEMD3Q9Y2U8 911 aa20.55■□□□□ 0.88
LINC00398-201ENST00000414407 RIPOR2Q9Y4F9 1068 aa20.55■□□□□ 0.88
LINC00398-201ENST00000414407 C6orf229H3BNL8 230 aa20.54■□□□□ 0.88
LINC00398-201ENST00000414407 ATP8B2P98198 1209 aa20.54■□□□□ 0.88
LINC00398-201ENST00000414407 COPRSQ9NQ92 184 aa20.54■□□□□ 0.88
LINC00398-201ENST00000414407 MROH5Q6ZUA9 1318 aa20.53■□□□□ 0.88
LINC00398-201ENST00000414407 PPIP5K2O43314 1243 aa20.53■□□□□ 0.88
LINC00398-201ENST00000414407 UFL1O94874 794 aa20.53■□□□□ 0.88
LINC00398-201ENST00000414407 WASHC4Q2M389 1173 aa20.53■□□□□ 0.88
LINC00398-201ENST00000414407 LARGE2Q8N3Y3 721 aa20.53■□□□□ 0.88
LINC00398-201ENST00000414407 JDP2Q8WYK2 163 aa20.53■□□□□ 0.88
LINC00398-201ENST00000414407 DICER1Q9UPY3 1922 aaKnown RBP20.53■□□□□ 0.88
LINC00398-201ENST00000414407 SPEF2Q9C093 1822 aa20.53■□□□□ 0.88
LINC00398-201ENST00000414407 EYA2O00167 538 aa20.52■□□□□ 0.88
LINC00398-201ENST00000414407 CIAO1O76071 339 aa20.52■□□□□ 0.88
LINC00398-201ENST00000414407 AOC3Q16853 763 aa20.52■□□□□ 0.88
LINC00398-201ENST00000414407 KLHDC4Q8TBB5 520 aa20.52■□□□□ 0.88
LINC00398-201ENST00000414407 PUS3Q9BZE2 481 aaKnown RBP20.52■□□□□ 0.88
LINC00398-201ENST00000414407 PNMA6EA0A0J9YXQ4 647 aa20.51■□□□□ 0.87
LINC00398-201ENST00000414407 POLA2Q14181 598 aa20.51■□□□□ 0.87
LINC00398-201ENST00000414407 LRRC24Q50LG9 513 aa20.51■□□□□ 0.87
LINC00398-201ENST00000414407 SSH3Q8TE77 659 aa20.51■□□□□ 0.87
LINC00398-201ENST00000414407 ZC3H12CQ9C0D7 883 aaKnown RBP20.51■□□□□ 0.87
LINC00398-201ENST00000414407 C1orf115Q9H7X2 142 aa20.51■□□□□ 0.87
LINC00398-201ENST00000414407 CCDC88AQ3V6T2 1871 aa20.51■□□□□ 0.87
LINC00398-201ENST00000414407 ZNF804BA4D1E1 1349 aa20.51■□□□□ 0.87
LINC00398-201ENST00000414407 FZD9O00144 591 aa20.5■□□□□ 0.87
LINC00398-201ENST00000414407 CEP85Q6P2H3 762 aa20.5■□□□□ 0.87
LINC00398-201ENST00000414407 RPAP2Q8IXW5 612 aaPredicted RBP20.5■□□□□ 0.87
LINC00398-201ENST00000414407 NIM1KQ8IY84 436 aa20.5■□□□□ 0.87
LINC00398-201ENST00000414407 MED23Q9ULK4 1368 aa20.49■□□□□ 0.87
LINC00398-201ENST00000414407 IL15P40933 162 aaPredicted RBP20.49■□□□□ 0.87
LINC00398-201ENST00000414407 C15orf52Q6ZUT6 534 aaKnown RBP20.49■□□□□ 0.87
LINC00398-201ENST00000414407 ATG9AQ7Z3C6 839 aa20.49■□□□□ 0.87
LINC00398-201ENST00000414407 SUPT16HQ9Y5B9 1047 aaKnown RBP20.49■□□□□ 0.87
LINC00398-201ENST00000414407 TAF5LO75529 589 aa20.48■□□□□ 0.87
LINC00398-201ENST00000414407 KCNJ4P48050 445 aa20.48■□□□□ 0.87
LINC00398-201ENST00000414407 UBE4AQ14139 1066 aa20.48■□□□□ 0.87
LINC00398-201ENST00000414407 METTL24Q5JXM2 366 aa20.48■□□□□ 0.87
LINC00398-201ENST00000414407 VGLL2Q8N8G2 317 aa20.48■□□□□ 0.87
LINC00398-201ENST00000414407 HELBQ8NG08 1087 aaPredicted RBP20.48■□□□□ 0.87
LINC00398-201ENST00000414407 ZNRF3Q9ULT6 936 aa20.48■□□□□ 0.87
LINC00398-201ENST00000414407 RIMBP2O15034 1052 aa20.47■□□□□ 0.87
LINC00398-201ENST00000414407 PDE8BO95263 885 aa20.47■□□□□ 0.87
LINC00398-201ENST00000414407 DPY19L2Q6NUT2 758 aa20.47■□□□□ 0.87
LINC00398-201ENST00000414407 PA2G4Q9UQ80 394 aaKnown RBP20.47■□□□□ 0.87
LINC00398-201ENST00000414407 COL4A5P29400 1685 aa20.47■□□□□ 0.87
LINC00398-201ENST00000414407 TIAM2Q8IVF5 1701 aa20.47■□□□□ 0.87
LINC00398-201ENST00000414407 GLTPD2A6NH11 291 aa20.46■□□□□ 0.87
LINC00398-201ENST00000414407 SIL1Q9H173 461 aa20.46■□□□□ 0.87
LINC00398-201ENST00000414407 A0A1B0GUL6 1792 aa20.45■□□□□ 0.86
LINC00398-201ENST00000414407 WTIPA6NIX2 430 aaPredicted RBP20.45■□□□□ 0.86
LINC00398-201ENST00000414407 EIF6P56537 245 aaKnown RBP20.45■□□□□ 0.86
LINC00398-201ENST00000414407 AAMPQ13685 434 aa20.45■□□□□ 0.86
LINC00398-201ENST00000414407 GPR101Q96P66 508 aaPredicted RBP20.45■□□□□ 0.86
LINC00398-201ENST00000414407 CEP126Q9P2H0 1117 aa20.45■□□□□ 0.86
LINC00398-201ENST00000414407 NOP58Q9Y2X3 529 aaKnown RBP20.45■□□□□ 0.86
LINC00398-201ENST00000414407 KDM2BQ8NHM5 1336 aa20.45■□□□□ 0.86
LINC00398-201ENST00000414407 IRS2Q9Y4H2 1338 aa20.45■□□□□ 0.86
LINC00398-201ENST00000414407 HMMRO75330 724 aa20.44■□□□□ 0.86
LINC00398-201ENST00000414407 G3BP1Q13283 466 aaKnown RBP eCLIP20.44■□□□□ 0.86
LINC00398-201ENST00000414407 PODNQ7Z5L7 613 aa20.44■□□□□ 0.86
LINC00398-201ENST00000414407 COA1Q9GZY4 146 aa20.44■□□□□ 0.86
LINC00398-201ENST00000414407 G3V3G9 751 aa20.43■□□□□ 0.86
LINC00398-201ENST00000414407 ECE2O60344 883 aa20.43■□□□□ 0.86
LINC00398-201ENST00000414407 PUM3Q15397 648 aaKnown RBP20.43■□□□□ 0.86
LINC00398-201ENST00000414407 DCAF8Q5TAQ9 597 aa20.43■□□□□ 0.86
LINC00398-201ENST00000414407 TXNRD3Q86VQ6 643 aa20.43■□□□□ 0.86
LINC00398-201ENST00000414407 CRBNQ96SW2 442 aa20.43■□□□□ 0.86
LINC00398-201ENST00000414407 SNAP23O00161 211 aa20.42■□□□□ 0.86
LINC00398-201ENST00000414407 FGFR2P21802 821 aa20.42■□□□□ 0.86
LINC00398-201ENST00000414407 DOK7Q18PE1 504 aa20.42■□□□□ 0.86
LINC00398-201ENST00000414407 GPC2Q8N158 579 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms