RNA–Protein interactions for RNA: ENST00000412587.5

PBRM1-209, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 4,766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-209ENST00000412587 SWAP70Q9UH65 585 aa9.76□□□□□ -0.85
PBRM1-209ENST00000412587 RAD50Q92878 1312 aa9.76□□□□□ -0.85
PBRM1-209ENST00000412587 PER1O15534 1290 aaPredicted RBP9.76□□□□□ -0.85
PBRM1-209ENST00000412587 ZFYVE9O95405 1425 aa9.76□□□□□ -0.85
PBRM1-209ENST00000412587 HOXC9P31274 260 aa9.76□□□□□ -0.85
PBRM1-209ENST00000412587 HDXQ7Z353 690 aa9.76□□□□□ -0.85
PBRM1-209ENST00000412587 JARID2Q92833 1246 aaPredicted RBP9.76□□□□□ -0.85
PBRM1-209ENST00000412587 ORAI2Q96SN7 254 aa9.76□□□□□ -0.85
PBRM1-209ENST00000412587 ZNF287Q9HBT7 754 aa9.76□□□□□ -0.85
PBRM1-209ENST00000412587 MORC2Q9Y6X9 1032 aaPredicted RBP9.76□□□□□ -0.85
PBRM1-209ENST00000412587 C6orf229H3BNL8 230 aa9.76□□□□□ -0.85
PBRM1-209ENST00000412587 DDX46Q7L014 1031 aaKnown RBP9.76□□□□□ -0.85
PBRM1-209ENST00000412587 MIPOL1Q8TD10 442 aa9.76□□□□□ -0.85
PBRM1-209ENST00000412587 KAT6BQ8WYB5 2073 aa9.76□□□□□ -0.85
PBRM1-209ENST00000412587 ME1P48163 572 aa9.75□□□□□ -0.85
PBRM1-209ENST00000412587 SMC1AQ14683 1233 aaKnown RBP9.75□□□□□ -0.85
PBRM1-209ENST00000412587 B4GALNT4Q76KP1 1039 aa9.75□□□□□ -0.85
PBRM1-209ENST00000412587 NFATC2IPQ8NCF5 419 aa9.75□□□□□ -0.85
PBRM1-209ENST00000412587 PHACTR3Q96KR7 559 aa9.75□□□□□ -0.85
PBRM1-209ENST00000412587 MEIS3Q99687 375 aa9.75□□□□□ -0.85
PBRM1-209ENST00000412587 LMTK3Q96Q04 1460 aa9.75□□□□□ -0.85
PBRM1-209ENST00000412587 POLR3DP05423 398 aaPredicted RBP9.75□□□□□ -0.85
PBRM1-209ENST00000412587 ACTN2P35609 894 aa9.75□□□□□ -0.85
PBRM1-209ENST00000412587 GOLGA1Q92805 767 aa9.75□□□□□ -0.85
PBRM1-209ENST00000412587 DNAJC5Q9H3Z4 198 aa9.75□□□□□ -0.85
PBRM1-209ENST00000412587 DNAI1Q9UI46 699 aa9.75□□□□□ -0.85
PBRM1-209ENST00000412587 TUBBP07437 444 aa9.75□□□□□ -0.85
PBRM1-209ENST00000412587 ZNF165P49910 485 aa9.75□□□□□ -0.85
PBRM1-209ENST00000412587 NBPF6Q5VWK0 638 aa9.75□□□□□ -0.85
PBRM1-209ENST00000412587 NBPF5PQ86XG9 351 aaPredicted RBP9.75□□□□□ -0.85
PBRM1-209ENST00000412587 NBPF4Q96M43 638 aa9.75□□□□□ -0.85
PBRM1-209ENST00000412587 TACO1Q9BSH4 297 aaKnown RBP9.75□□□□□ -0.85
PBRM1-209ENST00000412587 DDX19AQ9NUU7 478 aaKnown RBP9.75□□□□□ -0.85
PBRM1-209ENST00000412587 PIK3C2GO75747 1445 aa9.75□□□□□ -0.85
PBRM1-209ENST00000412587 A0A087WUV0 522 aaPredicted RBP9.75□□□□□ -0.85
PBRM1-209ENST00000412587 ATP8B1O43520 1251 aa9.75□□□□□ -0.85
PBRM1-209ENST00000412587 CAMK4Q16566 473 aa9.75□□□□□ -0.85
PBRM1-209ENST00000412587 BMP2KLQ5H9B9 411 aa9.75□□□□□ -0.85
PBRM1-209ENST00000412587 KSR2Q6VAB6 950 aa9.75□□□□□ -0.85
PBRM1-209ENST00000412587 RNF168Q8IYW5 571 aaPredicted RBP9.75□□□□□ -0.85
PBRM1-209ENST00000412587 WDR66Q8TBY9 1149 aa9.75□□□□□ -0.85
PBRM1-209ENST00000412587 DCAF5Q96JK2 942 aa9.75□□□□□ -0.85
PBRM1-209ENST00000412587 SCLT1Q96NL6 688 aa9.75□□□□□ -0.85
PBRM1-209ENST00000412587 ALDH1L1O75891 902 aa9.74□□□□□ -0.85
PBRM1-209ENST00000412587 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.74□□□□□ -0.85
PBRM1-209ENST00000412587 SPATA32Q96LK8 384 aa9.74□□□□□ -0.85
PBRM1-209ENST00000412587 TMEM2Q9UHN6 1383 aa9.74□□□□□ -0.85
PBRM1-209ENST00000412587 KIF5CO60282 957 aa9.74□□□□□ -0.85
PBRM1-209ENST00000412587 EVI5LQ96CN4 794 aa9.74□□□□□ -0.85
PBRM1-209ENST00000412587 MKNK2Q9HBH9 465 aa9.74□□□□□ -0.85
PBRM1-209ENST00000412587 GDPD2Q9HCC8 539 aa9.74□□□□□ -0.85
PBRM1-209ENST00000412587 LMBRD1Q9NUN5 540 aa9.74□□□□□ -0.85
PBRM1-209ENST00000412587 ANO10Q9NW15 660 aa9.74□□□□□ -0.85
PBRM1-209ENST00000412587 IRX1P78414 480 aaPredicted RBP9.74□□□□□ -0.85
PBRM1-209ENST00000412587 GIMAP6Q6P9H5 292 aa9.74□□□□□ -0.85
PBRM1-209ENST00000412587 SNRKQ9NRH2 765 aa9.74□□□□□ -0.85
PBRM1-209ENST00000412587 ZNF219Q9P2Y4 722 aaPredicted RBP9.74□□□□□ -0.85
PBRM1-209ENST00000412587 MAP3K5Q99683 1374 aa9.74□□□□□ -0.85
PBRM1-209ENST00000412587 KRT18P05783 430 aaKnown RBP9.74□□□□□ -0.85
PBRM1-209ENST00000412587 CRACR2BQ8N4Y2 399 aaPredicted RBP9.74□□□□□ -0.85
PBRM1-209ENST00000412587 MRPL50Q8N5N7 158 aaKnown RBP9.74□□□□□ -0.85
PBRM1-209ENST00000412587 CCDC148Q8NFR7 591 aa9.74□□□□□ -0.85
PBRM1-209ENST00000412587 COL17A1Q9UMD9 1497 aaPredicted RBP9.73□□□□□ -0.85
PBRM1-209ENST00000412587 GRM8O00222 908 aa9.73□□□□□ -0.85
PBRM1-209ENST00000412587 ARHGAP25P42331 645 aa9.73□□□□□ -0.85
PBRM1-209ENST00000412587 EPS15P42566 896 aa9.73□□□□□ -0.85
PBRM1-209ENST00000412587 KIF4BQ2VIQ3 1234 aa9.73□□□□□ -0.85
PBRM1-209ENST00000412587 WASF1Q92558 559 aa9.73□□□□□ -0.85
PBRM1-209ENST00000412587 RHPN1Q8TCX5 695 aa9.73□□□□□ -0.85
PBRM1-209ENST00000412587 CCDC114Q96M63 670 aa9.73□□□□□ -0.85
PBRM1-209ENST00000412587 DONSONQ9NYP3 566 aa9.73□□□□□ -0.85
PBRM1-209ENST00000412587 ZFYVE16Q7Z3T8 1539 aa9.73□□□□□ -0.85
PBRM1-209ENST00000412587 YEATS2Q9ULM3 1422 aa9.73□□□□□ -0.85
PBRM1-209ENST00000412587 ELP1O95163 1332 aa9.73□□□□□ -0.85
PBRM1-209ENST00000412587 CCDC152Q4G0S7 254 aa9.73□□□□□ -0.85
PBRM1-209ENST00000412587 FBXO18Q8NFZ0 1043 aa9.73□□□□□ -0.85
PBRM1-209ENST00000412587 ZNF215Q9UL58 517 aaPredicted RBP9.73□□□□□ -0.85
PBRM1-209ENST00000412587 MAGI3Q5TCQ9 1506 aa9.73□□□□□ -0.85
PBRM1-209ENST00000412587 KIF5BP33176 963 aa9.72□□□□□ -0.85
PBRM1-209ENST00000412587 DBN1Q16643 649 aa9.72□□□□□ -0.85
PBRM1-209ENST00000412587 SLF2Q8IX21 1173 aa9.72□□□□□ -0.85
PBRM1-209ENST00000412587 LINS1Q8NG48 757 aa9.72□□□□□ -0.85
PBRM1-209ENST00000412587 CTCFLQ8NI51 663 aaPredicted RBP9.72□□□□□ -0.85
PBRM1-209ENST00000412587 AFAP1L1Q8TED9 768 aa9.72□□□□□ -0.85
PBRM1-209ENST00000412587 EXOC4Q96A65 974 aa9.72□□□□□ -0.85
PBRM1-209ENST00000412587 PDLIM2Q96JY6 352 aa9.72□□□□□ -0.85
PBRM1-209ENST00000412587 BTG4Q9NY30 223 aa9.72□□□□□ -0.85
PBRM1-209ENST00000412587 CFAP45Q9UL16 551 aa9.72□□□□□ -0.85
PBRM1-209ENST00000412587 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.72□□□□□ -0.85
PBRM1-209ENST00000412587 EDC4Q6P2E9 1401 aaKnown RBP9.72□□□□□ -0.85
PBRM1-209ENST00000412587 ZNF213O14771 459 aa9.72□□□□□ -0.85
PBRM1-209ENST00000412587 VAMP4O75379 141 aa9.72□□□□□ -0.85
PBRM1-209ENST00000412587 PIP4K2AP48426 406 aaPredicted RBP9.72□□□□□ -0.85
PBRM1-209ENST00000412587 EVCP57679 992 aa9.72□□□□□ -0.85
PBRM1-209ENST00000412587 CCDC121Q6ZUS5 278 aa9.72□□□□□ -0.85
PBRM1-209ENST00000412587 TRIM6Q9C030 488 aaPredicted RBP9.72□□□□□ -0.85
PBRM1-209ENST00000412587 SCAND2PQ9GZW5 306 aaPredicted RBP9.72□□□□□ -0.85
PBRM1-209ENST00000412587 PPP1R12AO14974 1030 aaPredicted RBP9.72□□□□□ -0.85
PBRM1-209ENST00000412587 LTKP29376 864 aa9.72□□□□□ -0.85
PBRM1-209ENST00000412587 GNG11P61952 73 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms