RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 EYA3Q99504 573 aa23.83■■□□□ 1.41
TRIM56-202ENST00000412507 HACL1Q9UJ83 578 aa23.83■■□□□ 1.41
TRIM56-202ENST00000412507 GGA1Q9UJY5 639 aa23.83■■□□□ 1.41
TRIM56-202ENST00000412507 CHMP3Q9Y3E7 222 aa23.83■■□□□ 1.41
TRIM56-202ENST00000412507 IGHMBP2P38935 993 aaKnown RBP23.82■■□□□ 1.4
TRIM56-202ENST00000412507 RARSP54136 660 aaKnown RBP23.82■■□□□ 1.4
TRIM56-202ENST00000412507 CXCL9Q07325 125 aa23.82■■□□□ 1.4
TRIM56-202ENST00000412507 TAF1DQ9H5J8 278 aaPredicted RBP23.82■■□□□ 1.4
TRIM56-202ENST00000412507 NOB1Q9ULX3 412 aaKnown RBP23.82■■□□□ 1.4
TRIM56-202ENST00000412507 MINPP1Q9UNW1 487 aa23.82■■□□□ 1.4
TRIM56-202ENST00000412507 XDHP47989 1333 aa23.82■■□□□ 1.4
TRIM56-202ENST00000412507 ADAMTSL1Q8N6G6 1762 aa23.81■■□□□ 1.4
TRIM56-202ENST00000412507 NBPF7P0C2Y1 421 aaPredicted RBP23.81■■□□□ 1.4
TRIM56-202ENST00000412507 POTEIP0CG38 1075 aa23.81■■□□□ 1.4
TRIM56-202ENST00000412507 POTEJP0CG39 1038 aa23.81■■□□□ 1.4
TRIM56-202ENST00000412507 LMBR1LQ6UX01 489 aa23.81■■□□□ 1.4
TRIM56-202ENST00000412507 DBNDD1Q9H9R9 158 aa23.81■■□□□ 1.4
TRIM56-202ENST00000412507 ANKRD18BA2A2Z9 1011 aa23.8■■□□□ 1.4
TRIM56-202ENST00000412507 YDJCA8MPS7 323 aa23.8■■□□□ 1.4
TRIM56-202ENST00000412507 RAD17O75943 681 aa23.8■■□□□ 1.4
TRIM56-202ENST00000412507 BRPF1P55201 1214 aaPredicted RBP23.8■■□□□ 1.4
TRIM56-202ENST00000412507 SUCLG2Q96I99 432 aa23.8■■□□□ 1.4
TRIM56-202ENST00000412507 ZC3H12CQ9C0D7 883 aaKnown RBP23.8■■□□□ 1.4
TRIM56-202ENST00000412507 EPHX2P34913 555 aa23.79■■□□□ 1.4
TRIM56-202ENST00000412507 DOK7Q18PE1 504 aa23.79■■□□□ 1.4
TRIM56-202ENST00000412507 CIAPIN1Q6FI81 312 aa23.79■■□□□ 1.4
TRIM56-202ENST00000412507 MPHOSPH8Q99549 860 aa23.79■■□□□ 1.4
TRIM56-202ENST00000412507 UTYO14607 1347 aa23.79■■□□□ 1.4
TRIM56-202ENST00000412507 WTIPA6NIX2 430 aaPredicted RBP23.78■■□□□ 1.4
TRIM56-202ENST00000412507 ECE2O60344 883 aa23.78■■□□□ 1.4
TRIM56-202ENST00000412507 SCNN1DP51172 638 aa23.78■■□□□ 1.4
TRIM56-202ENST00000412507 IFIT5Q13325 482 aaKnown RBP23.78■■□□□ 1.4
TRIM56-202ENST00000412507 EAPPQ56P03 285 aaPredicted RBP23.78■■□□□ 1.4
TRIM56-202ENST00000412507 KAZALD1Q96I82 304 aa23.78■■□□□ 1.4
TRIM56-202ENST00000412507 ATP2B4P23634 1241 aa23.77■■□□□ 1.4
TRIM56-202ENST00000412507 LMOD1P29536 600 aaPredicted RBP23.77■■□□□ 1.4
TRIM56-202ENST00000412507 ZBED9Q6R2W3 1325 aa23.77■■□□□ 1.4
TRIM56-202ENST00000412507 EPS15P42566 896 aa23.76■■□□□ 1.39
TRIM56-202ENST00000412507 TNIP1Q15025 636 aa23.76■■□□□ 1.39
TRIM56-202ENST00000412507 CHADLQ6NUI6 762 aa23.76■■□□□ 1.39
TRIM56-202ENST00000412507 API5Q9BZZ5 524 aaKnown RBP23.76■■□□□ 1.39
TRIM56-202ENST00000412507 POLR2AP24928 1970 aaKnown RBP23.75■■□□□ 1.39
TRIM56-202ENST00000412507 G3V3G9 751 aa23.75■■□□□ 1.39
TRIM56-202ENST00000412507 CCT4P50991 539 aaKnown RBP23.75■■□□□ 1.39
TRIM56-202ENST00000412507 CCDC57Q2TAC2 916 aa23.75■■□□□ 1.39
TRIM56-202ENST00000412507 DCAF8Q5TAQ9 597 aa23.75■■□□□ 1.39
TRIM56-202ENST00000412507 ZNF594Q96JF6 807 aaPredicted RBP23.75■■□□□ 1.39
TRIM56-202ENST00000412507 USP44Q9H0E7 712 aa23.75■■□□□ 1.39
TRIM56-202ENST00000412507 KCNQ5Q9NR82 932 aa23.75■■□□□ 1.39
TRIM56-202ENST00000412507 ZNF646O15015 1829 aaPredicted RBP23.75■■□□□ 1.39
TRIM56-202ENST00000412507 CEP350Q5VT06 3117 aa23.75■■□□□ 1.39
TRIM56-202ENST00000412507 GMPSP49915 693 aaPredicted RBP23.74■■□□□ 1.39
TRIM56-202ENST00000412507 LDHDQ86WU2 507 aa23.74■■□□□ 1.39
TRIM56-202ENST00000412507 BICC1Q9H694 974 aaKnown RBP23.74■■□□□ 1.39
TRIM56-202ENST00000412507 CLEC11AQ9Y240 323 aa23.74■■□□□ 1.39
TRIM56-202ENST00000412507 KIF16BQ96L93 1317 aa23.74■■□□□ 1.39
TRIM56-202ENST00000412507 PSMD14O00487 310 aa23.73■■□□□ 1.39
TRIM56-202ENST00000412507 BCAR3O75815 825 aa23.73■■□□□ 1.39
TRIM56-202ENST00000412507 APLP1P51693 650 aa23.73■■□□□ 1.39
TRIM56-202ENST00000412507 CHRNDQ07001 517 aa23.73■■□□□ 1.39
TRIM56-202ENST00000412507 TAF7LQ5H9L4 462 aa23.73■■□□□ 1.39
TRIM56-202ENST00000412507 PNMA8AQ86V59 439 aaPredicted RBP23.73■■□□□ 1.39
TRIM56-202ENST00000412507 ANKRD2Q9GZV1 360 aa23.73■■□□□ 1.39
TRIM56-202ENST00000412507 GPRC5DQ9NZD1 345 aa23.73■■□□□ 1.39
TRIM56-202ENST00000412507 ANKRD44Q8N8A2 993 aa23.72■■□□□ 1.39
TRIM56-202ENST00000412507 LEMD3Q9Y2U8 911 aa23.72■■□□□ 1.39
TRIM56-202ENST00000412507 MED23Q9ULK4 1368 aa23.72■■□□□ 1.39
TRIM56-202ENST00000412507 HELBQ8NG08 1087 aaPredicted RBP23.71■■□□□ 1.39
TRIM56-202ENST00000412507 ARHGAP45Q92619 1136 aa23.71■■□□□ 1.39
TRIM56-202ENST00000412507 ZBTB12Q9Y330 459 aaPredicted RBP23.71■■□□□ 1.39
TRIM56-202ENST00000412507 ZNF804BA4D1E1 1349 aa23.7■■□□□ 1.38
TRIM56-202ENST00000412507 TAF5LO75529 589 aa23.7■■□□□ 1.38
TRIM56-202ENST00000412507 RABL6Q3YEC7 729 aaPredicted RBP23.7■■□□□ 1.38
TRIM56-202ENST00000412507 TRPM7Q96QT4 1865 aa23.7■■□□□ 1.38
TRIM56-202ENST00000412507 HTRA3P83110 453 aa23.69■■□□□ 1.38
TRIM56-202ENST00000412507 LDHAL6AQ6ZMR3 332 aa23.69■■□□□ 1.38
TRIM56-202ENST00000412507 TXNRD3Q86VQ6 643 aa23.69■■□□□ 1.38
TRIM56-202ENST00000412507 FRAT1Q92837 279 aaPredicted RBP23.69■■□□□ 1.38
TRIM56-202ENST00000412507 CNNM1Q9NRU3 951 aa23.69■■□□□ 1.38
TRIM56-202ENST00000412507 ADARB2Q9NS39 739 aaKnown RBP23.69■■□□□ 1.38
TRIM56-202ENST00000412507 SHTN1A0MZ66 631 aa23.68■■□□□ 1.38
TRIM56-202ENST00000412507 KCNJ4P48050 445 aa23.68■■□□□ 1.38
TRIM56-202ENST00000412507 USP50Q70EL3 339 aaPredicted RBP23.68■■□□□ 1.38
TRIM56-202ENST00000412507 CNOT7Q9UIV1 285 aaKnown RBP23.68■■□□□ 1.38
TRIM56-202ENST00000412507 SNAP23O00161 211 aa23.67■■□□□ 1.38
TRIM56-202ENST00000412507 IPO8O15397 1037 aaKnown RBP23.67■■□□□ 1.38
TRIM56-202ENST00000412507 KLRK1P26718 216 aa23.67■■□□□ 1.38
TRIM56-202ENST00000412507 MAP1SQ66K74 1059 aaPredicted RBP23.67■■□□□ 1.38
TRIM56-202ENST00000412507 PUS3Q9BZE2 481 aaKnown RBP23.67■■□□□ 1.38
TRIM56-202ENST00000412507 TNNQ9UQP3 1299 aa23.67■■□□□ 1.38
TRIM56-202ENST00000412507 PLIN1O60240 522 aa23.66■■□□□ 1.38
TRIM56-202ENST00000412507 VIL1P09327 827 aaKnown RBP23.66■■□□□ 1.38
TRIM56-202ENST00000412507 PODNQ7Z5L7 613 aa23.66■■□□□ 1.38
TRIM56-202ENST00000412507 UBTFL1P0CB47 393 aaPredicted RBP23.65■■□□□ 1.38
TRIM56-202ENST00000412507 TRIM27P14373 513 aa23.65■■□□□ 1.38
TRIM56-202ENST00000412507 ATF7IPQ6VMQ6 1270 aa23.65■■□□□ 1.38
TRIM56-202ENST00000412507 MICALL2Q8IY33 904 aa23.65■■□□□ 1.38
TRIM56-202ENST00000412507 DPF2Q92785 391 aa23.65■■□□□ 1.38
TRIM56-202ENST00000412507 ITGBL1O95965 494 aaPredicted RBP23.64■■□□□ 1.37
TRIM56-202ENST00000412507 RPS12P25398 132 aaKnown RBP23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms