RNA–Protein interactions for RNA: ENST00000411900.5

PKP4-203, Transcript of plakophilin 4, humanhuman

TSL 4

Gene PKP4, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-203ENST00000411900 TMEM88BA6NKF7 163 aa12.84□□□□□ -0.35
PKP4-203ENST00000411900 F6X3S4 739 aa12.84□□□□□ -0.35
PKP4-203ENST00000411900 PSMD14O00487 310 aa12.84□□□□□ -0.35
PKP4-203ENST00000411900 ECE2O60344 883 aa12.84□□□□□ -0.35
PKP4-203ENST00000411900 TNIP1Q15025 636 aa12.84□□□□□ -0.35
PKP4-203ENST00000411900 USP50Q70EL3 339 aaPredicted RBP12.84□□□□□ -0.35
PKP4-203ENST00000411900 EYA3Q99504 573 aa12.84□□□□□ -0.35
PKP4-203ENST00000411900 MYH16Q9H6N6 1097 aa12.84□□□□□ -0.35
PKP4-203ENST00000411900 GREM2Q9H772 168 aa12.84□□□□□ -0.35
PKP4-203ENST00000411900 ADARB2Q9NS39 739 aaKnown RBP12.84□□□□□ -0.35
PKP4-203ENST00000411900 TRPM7Q96QT4 1865 aa12.84□□□□□ -0.35
PKP4-203ENST00000411900 G3V3G9 751 aa12.83□□□□□ -0.36
PKP4-203ENST00000411900 H7C1W4 665 aa12.83□□□□□ -0.36
PKP4-203ENST00000411900 TRAF5O00463 557 aa12.83□□□□□ -0.36
PKP4-203ENST00000411900 GCKRQ14397 625 aa12.83□□□□□ -0.36
PKP4-203ENST00000411900 DCAF8Q5TAQ9 597 aa12.83□□□□□ -0.36
PKP4-203ENST00000411900 TTLL11Q8NHH1 800 aa12.83□□□□□ -0.36
PKP4-203ENST00000411900 GGA1Q9UJY5 639 aa12.83□□□□□ -0.36
PKP4-203ENST00000411900 WTIPA6NIX2 430 aaPredicted RBP12.82□□□□□ -0.36
PKP4-203ENST00000411900 CCER2I3L3R5 266 aa12.82□□□□□ -0.36
PKP4-203ENST00000411900 HSPA1AP0DMV8 641 aaKnown RBP12.82□□□□□ -0.36
PKP4-203ENST00000411900 HSPA1BP0DMV9 641 aaKnown RBP12.82□□□□□ -0.36
PKP4-203ENST00000411900 MICALL2Q8IY33 904 aa12.82□□□□□ -0.36
PKP4-203ENST00000411900 TRPM4Q8TD43 1214 aa12.82□□□□□ -0.36
PKP4-203ENST00000411900 CDC5LQ99459 802 aaKnown RBP12.82□□□□□ -0.36
PKP4-203ENST00000411900 ZC3H12CQ9C0D7 883 aaKnown RBP12.82□□□□□ -0.36
PKP4-203ENST00000411900 PODXL2Q9NZ53 605 aa12.82□□□□□ -0.36
PKP4-203ENST00000411900 CNOT7Q9UIV1 285 aaKnown RBP12.82□□□□□ -0.36
PKP4-203ENST00000411900 CNTNAP1P78357 1384 aa12.81□□□□□ -0.36
PKP4-203ENST00000411900 RTL9Q8NET4 1388 aa12.81□□□□□ -0.36
PKP4-203ENST00000411900 HIRAP54198 1017 aaPredicted RBP12.81□□□□□ -0.36
PKP4-203ENST00000411900 FAM161AQ3B820 660 aa12.81□□□□□ -0.36
PKP4-203ENST00000411900 LINS1Q8NG48 757 aa12.81□□□□□ -0.36
PKP4-203ENST00000411900 ABT1Q9ULW3 272 aaKnown RBP12.81□□□□□ -0.36
PKP4-203ENST00000411900 XDHP47989 1333 aa12.81□□□□□ -0.36
PKP4-203ENST00000411900 POLR2AP24928 1970 aaKnown RBP12.8□□□□□ -0.36
PKP4-203ENST00000411900 H7C1D1 291 aa12.8□□□□□ -0.36
PKP4-203ENST00000411900 VEGFBP49765 207 aa12.8□□□□□ -0.36
PKP4-203ENST00000411900 CASP7P55210 303 aa12.8□□□□□ -0.36
PKP4-203ENST00000411900 RBM26Q5T8P6 1007 aaKnown RBP12.8□□□□□ -0.36
PKP4-203ENST00000411900 SAMD7Q7Z3H4 446 aa12.8□□□□□ -0.36
PKP4-203ENST00000411900 GLIS2Q9BZE0 524 aaPredicted RBP12.8□□□□□ -0.36
PKP4-203ENST00000411900 PSME4Q14997 1843 aa12.8□□□□□ -0.36
PKP4-203ENST00000411900 ZNF521Q96K83 1311 aa12.8□□□□□ -0.36
PKP4-203ENST00000411900 EGFRP00533 1210 aa12.79□□□□□ -0.36
PKP4-203ENST00000411900 ITGA6P23229 1130 aa12.79□□□□□ -0.36
PKP4-203ENST00000411900 ATP2B4P23634 1241 aa12.79□□□□□ -0.36
PKP4-203ENST00000411900 IGHMBP2P38935 993 aaKnown RBP12.79□□□□□ -0.36
PKP4-203ENST00000411900 TBC1D10BQ4KMP7 808 aaPredicted RBP12.79□□□□□ -0.36
PKP4-203ENST00000411900 BEND3Q5T5X7 828 aa12.79□□□□□ -0.36
PKP4-203ENST00000411900 SLC4A10Q6U841 1118 aa12.79□□□□□ -0.36
PKP4-203ENST00000411900 BSDC1Q9NW68 430 aaPredicted RBP12.79□□□□□ -0.36
PKP4-203ENST00000411900 MINPP1Q9UNW1 487 aa12.79□□□□□ -0.36
PKP4-203ENST00000411900 CHMP3Q9Y3E7 222 aa12.79□□□□□ -0.36
PKP4-203ENST00000411900 GRM1Q13255 1194 aa12.78□□□□□ -0.36
PKP4-203ENST00000411900 DEFB115Q30KQ5 88 aa12.78□□□□□ -0.36
PKP4-203ENST00000411900 COL13A1Q5TAT6 717 aaPredicted RBP12.78□□□□□ -0.36
PKP4-203ENST00000411900 IFFO2Q5TF58 517 aa12.78□□□□□ -0.36
PKP4-203ENST00000411900 CST9Q5W186 159 aa12.78□□□□□ -0.36
PKP4-203ENST00000411900 DLK2Q6UY11 383 aa12.78□□□□□ -0.36
PKP4-203ENST00000411900 PAXIP1Q6ZW49 1069 aaPredicted RBP12.78□□□□□ -0.36
PKP4-203ENST00000411900 PLA2G12BQ9BX93 195 aa12.78□□□□□ -0.36
PKP4-203ENST00000411900 ZNF408Q9H9D4 720 aa12.78□□□□□ -0.36
PKP4-203ENST00000411900 A0A1B0GUL6 1792 aa12.78□□□□□ -0.36
PKP4-203ENST00000411900 CCT4P50991 539 aaKnown RBP12.77□□□□□ -0.37
PKP4-203ENST00000411900 DPF2Q92785 391 aa12.77□□□□□ -0.37
PKP4-203ENST00000411900 FBXW7Q969H0 707 aa12.77□□□□□ -0.37
PKP4-203ENST00000411900 MPHOSPH8Q99549 860 aa12.77□□□□□ -0.37
PKP4-203ENST00000411900 RASSF10A6NK89 507 aa12.76□□□□□ -0.37
PKP4-203ENST00000411900 CELF2O95319 508 aaKnown RBP12.76□□□□□ -0.37
PKP4-203ENST00000411900 CSF1RP07333 972 aa12.76□□□□□ -0.37
PKP4-203ENST00000411900 VIL1P09327 827 aaKnown RBP12.76□□□□□ -0.37
PKP4-203ENST00000411900 RPS12P25398 132 aaKnown RBP12.76□□□□□ -0.37
PKP4-203ENST00000411900 KLRK1P26718 216 aa12.76□□□□□ -0.37
PKP4-203ENST00000411900 FOXO4P98177 505 aa12.76□□□□□ -0.37
PKP4-203ENST00000411900 EPHA10Q5JZY3 1008 aa12.76□□□□□ -0.37
PKP4-203ENST00000411900 USP48Q86UV5 1035 aa12.76□□□□□ -0.37
PKP4-203ENST00000411900 CDCA7LQ96GN5 454 aa12.76□□□□□ -0.37
PKP4-203ENST00000411900 MXD3Q9BW11 206 aa12.76□□□□□ -0.37
PKP4-203ENST00000411900 ZNF646O15015 1829 aaPredicted RBP12.76□□□□□ -0.37
PKP4-203ENST00000411900 ANKRD18BA2A2Z9 1011 aa12.75□□□□□ -0.37
PKP4-203ENST00000411900 GRM8O00222 908 aa12.75□□□□□ -0.37
PKP4-203ENST00000411900 ASTN2O75129 1339 aaPredicted RBP12.75□□□□□ -0.37
PKP4-203ENST00000411900 KIF4BQ2VIQ3 1234 aa12.75□□□□□ -0.37
PKP4-203ENST00000411900 CYP4F22Q6NT55 531 aa12.75□□□□□ -0.37
PKP4-203ENST00000411900 RSBN1LQ6PCB5 846 aaPredicted RBP12.75□□□□□ -0.37
PKP4-203ENST00000411900 TXNRD3Q86VQ6 643 aa12.75□□□□□ -0.37
PKP4-203ENST00000411900 WDR33Q9C0J8 1336 aaKnown RBP12.75□□□□□ -0.37
PKP4-203ENST00000411900 C9orf78Q9NZ63 289 aaPredicted RBP12.75□□□□□ -0.37
PKP4-203ENST00000411900 PGAP2Q9UHJ9 254 aa12.75□□□□□ -0.37
PKP4-203ENST00000411900 MED23Q9ULK4 1368 aa12.75□□□□□ -0.37
PKP4-203ENST00000411900 ZNF804BA4D1E1 1349 aa12.74□□□□□ -0.37
PKP4-203ENST00000411900 USP17L3A6NCW0 530 aa12.74□□□□□ -0.37
PKP4-203ENST00000411900 USP17L4A6NCW7 530 aa12.74□□□□□ -0.37
PKP4-203ENST00000411900 ADM5C9JUS6 153 aa12.74□□□□□ -0.37
PKP4-203ENST00000411900 E9PSI1 815 aa12.74□□□□□ -0.37
PKP4-203ENST00000411900 SNAP23O00161 211 aa12.74□□□□□ -0.37
PKP4-203ENST00000411900 TAF5LO75529 589 aa12.74□□□□□ -0.37
PKP4-203ENST00000411900 KCNJ4P48050 445 aa12.74□□□□□ -0.37
PKP4-203ENST00000411900 CHRNDQ07001 517 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms