RNA–Protein interactions for RNA: ENST00000411552.5

NOD1-202, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 794 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-202ENST00000411552 ATF7IPQ6VMQ6 1270 aa20.56■□□□□ 0.88
NOD1-202ENST00000411552 GPR101Q96P66 508 aaPredicted RBP20.56■□□□□ 0.88
NOD1-202ENST00000411552 BICC1Q9H694 974 aaKnown RBP20.56■□□□□ 0.88
NOD1-202ENST00000411552 MINPP1Q9UNW1 487 aa20.56■□□□□ 0.88
NOD1-202ENST00000411552 TNNQ9UQP3 1299 aa20.56■□□□□ 0.88
NOD1-202ENST00000411552 XDHP47989 1333 aa20.55■□□□□ 0.88
NOD1-202ENST00000411552 UFL1O94874 794 aa20.55■□□□□ 0.88
NOD1-202ENST00000411552 WASHC4Q2M389 1173 aa20.55■□□□□ 0.88
NOD1-202ENST00000411552 INTS3Q68E01 1043 aaKnown RBP20.55■□□□□ 0.88
NOD1-202ENST00000411552 MPHOSPH8Q99549 860 aa20.55■□□□□ 0.88
NOD1-202ENST00000411552 GGA1Q9UJY5 639 aa20.55■□□□□ 0.88
NOD1-202ENST00000411552 CCDC57Q2TAC2 916 aa20.54■□□□□ 0.88
NOD1-202ENST00000411552 RABL6Q3YEC7 729 aaPredicted RBP20.54■□□□□ 0.88
NOD1-202ENST00000411552 ANKRD44Q8N8A2 993 aa20.54■□□□□ 0.88
NOD1-202ENST00000411552 POTECB2RU33 542 aa20.53■□□□□ 0.88
NOD1-202ENST00000411552 RIMBP2O15034 1052 aa20.53■□□□□ 0.88
NOD1-202ENST00000411552 VEGFAP15692 232 aaPredicted RBP20.53■□□□□ 0.88
NOD1-202ENST00000411552 EIF6P56537 245 aaKnown RBP20.53■□□□□ 0.88
NOD1-202ENST00000411552 ZKSCAN2Q63HK3 967 aa20.53■□□□□ 0.88
NOD1-202ENST00000411552 ZNF594Q96JF6 807 aaPredicted RBP20.53■□□□□ 0.88
NOD1-202ENST00000411552 EYA3Q99504 573 aa20.53■□□□□ 0.88
NOD1-202ENST00000411552 ZNRF3Q9ULT6 936 aa20.53■□□□□ 0.88
NOD1-202ENST00000411552 WTIPA6NIX2 430 aaPredicted RBP20.52■□□□□ 0.88
NOD1-202ENST00000411552 GPC2Q8N158 579 aa20.52■□□□□ 0.88
NOD1-202ENST00000411552 CLUAP1Q96AJ1 413 aa20.52■□□□□ 0.88
NOD1-202ENST00000411552 L3MBTL3Q96JM7 780 aaPredicted RBP20.52■□□□□ 0.88
NOD1-202ENST00000411552 UBTFL1P0CB47 393 aaPredicted RBP20.51■□□□□ 0.87
NOD1-202ENST00000411552 ATP2B4P23634 1241 aa20.51■□□□□ 0.87
NOD1-202ENST00000411552 TAF7LQ5H9L4 462 aa20.51■□□□□ 0.87
NOD1-202ENST00000411552 A0A1B0GUL6 1792 aa20.5■□□□□ 0.87
NOD1-202ENST00000411552 YDJCA8MPS7 323 aa20.5■□□□□ 0.87
NOD1-202ENST00000411552 CHRNDQ07001 517 aa20.5■□□□□ 0.87
NOD1-202ENST00000411552 CXCL9Q07325 125 aa20.5■□□□□ 0.87
NOD1-202ENST00000411552 MEIS3Q99687 375 aa20.5■□□□□ 0.87
NOD1-202ENST00000411552 ZC3H12CQ9C0D7 883 aaKnown RBP20.5■□□□□ 0.87
NOD1-202ENST00000411552 DBNDD1Q9H9R9 158 aa20.5■□□□□ 0.87
NOD1-202ENST00000411552 GJA3Q9Y6H8 435 aa20.5■□□□□ 0.87
NOD1-202ENST00000411552 SCN4AP35499 1836 aa20.5■□□□□ 0.87
NOD1-202ENST00000411552 TOMM70O94826 608 aa20.49■□□□□ 0.87
NOD1-202ENST00000411552 DOK7Q18PE1 504 aa20.49■□□□□ 0.87
NOD1-202ENST00000411552 LDHAL6AQ6ZMR3 332 aa20.49■□□□□ 0.87
NOD1-202ENST00000411552 C16orf71Q8IYS4 520 aaPredicted RBP20.49■□□□□ 0.87
NOD1-202ENST00000411552 ANKRD2Q9GZV1 360 aa20.49■□□□□ 0.87
NOD1-202ENST00000411552 TMEM57Q8N5G2 664 aa20.48■□□□□ 0.87
NOD1-202ENST00000411552 SCN9AQ15858 1988 aa20.47■□□□□ 0.87
NOD1-202ENST00000411552 ECE2O60344 883 aa20.47■□□□□ 0.87
NOD1-202ENST00000411552 RAD17O75943 681 aa20.47■□□□□ 0.87
NOD1-202ENST00000411552 HELBQ8NG08 1087 aaPredicted RBP20.47■□□□□ 0.87
NOD1-202ENST00000411552 CNNM1Q9NRU3 951 aa20.47■□□□□ 0.87
NOD1-202ENST00000411552 LEMD3Q9Y2U8 911 aa20.47■□□□□ 0.87
NOD1-202ENST00000411552 LRRFIP2Q9Y608 721 aaKnown RBP20.47■□□□□ 0.87
NOD1-202ENST00000411552 MED23Q9ULK4 1368 aa20.46■□□□□ 0.87
NOD1-202ENST00000411552 IQCA1LA6NCM1 817 aa20.46■□□□□ 0.87
NOD1-202ENST00000411552 CIAPIN1Q6FI81 312 aa20.46■□□□□ 0.87
NOD1-202ENST00000411552 PUS3Q9BZE2 481 aaKnown RBP20.46■□□□□ 0.87
NOD1-202ENST00000411552 ZNF804BA4D1E1 1349 aa20.46■□□□□ 0.87
NOD1-202ENST00000411552 TAF5LO75529 589 aa20.45■□□□□ 0.86
NOD1-202ENST00000411552 GNAI3P08754 354 aa20.45■□□□□ 0.86
NOD1-202ENST00000411552 RLBP1P12271 317 aa20.45■□□□□ 0.86
NOD1-202ENST00000411552 TNIP1Q15025 636 aa20.45■□□□□ 0.86
NOD1-202ENST00000411552 FTSJ3Q8IY81 847 aaKnown RBP20.45■□□□□ 0.86
NOD1-202ENST00000411552 DZIP1LQ8IYY4 767 aaKnown RBP20.45■□□□□ 0.86
NOD1-202ENST00000411552 KLHDC4Q8TBB5 520 aa20.45■□□□□ 0.86
NOD1-202ENST00000411552 RBM46Q8TBY0 533 aaKnown RBP20.45■□□□□ 0.86
NOD1-202ENST00000411552 YTHDC1Q96MU7 727 aaKnown RBP20.45■□□□□ 0.86
NOD1-202ENST00000411552 TAF1DQ9H5J8 278 aaPredicted RBP20.45■□□□□ 0.86
NOD1-202ENST00000411552 KCNQ5Q9NR82 932 aa20.45■□□□□ 0.86
NOD1-202ENST00000411552 HACL1Q9UJ83 578 aa20.45■□□□□ 0.86
NOD1-202ENST00000411552 RCAN3Q9UKA8 241 aa20.45■□□□□ 0.86
NOD1-202ENST00000411552 HDAC5Q9UQL6 1122 aa20.45■□□□□ 0.86
NOD1-202ENST00000411552 G3V3G9 751 aa20.44■□□□□ 0.86
NOD1-202ENST00000411552 SNAP23O00161 211 aa20.44■□□□□ 0.86
NOD1-202ENST00000411552 KLRK1P26718 216 aa20.44■□□□□ 0.86
NOD1-202ENST00000411552 KCNJ4P48050 445 aa20.44■□□□□ 0.86
NOD1-202ENST00000411552 SCNN1DP51172 638 aa20.44■□□□□ 0.86
NOD1-202ENST00000411552 DCAF8Q5TAQ9 597 aa20.44■□□□□ 0.86
NOD1-202ENST00000411552 RFX5P48382 616 aaPredicted RBP20.43■□□□□ 0.86
NOD1-202ENST00000411552 GMPSP49915 693 aaPredicted RBP20.43■□□□□ 0.86
NOD1-202ENST00000411552 TXNRD3Q86VQ6 643 aa20.43■□□□□ 0.86
NOD1-202ENST00000411552 RIPOR2Q9Y4F9 1068 aa20.43■□□□□ 0.86
NOD1-202ENST00000411552 PSMD14O00487 310 aa20.42■□□□□ 0.86
NOD1-202ENST00000411552 PLIN1O60240 522 aa20.42■□□□□ 0.86
NOD1-202ENST00000411552 EPHX2P34913 555 aa20.42■□□□□ 0.86
NOD1-202ENST00000411552 LRRC24Q50LG9 513 aa20.42■□□□□ 0.86
NOD1-202ENST00000411552 PSME4Q14997 1843 aa20.41■□□□□ 0.86
NOD1-202ENST00000411552 POTEIP0CG38 1075 aa20.41■□□□□ 0.86
NOD1-202ENST00000411552 POTEJP0CG39 1038 aa20.41■□□□□ 0.86
NOD1-202ENST00000411552 LMOD1P29536 600 aaPredicted RBP20.41■□□□□ 0.86
NOD1-202ENST00000411552 EPS15P42566 896 aa20.41■□□□□ 0.86
NOD1-202ENST00000411552 GPRC5DQ9NZD1 345 aa20.41■□□□□ 0.86
NOD1-202ENST00000411552 IRS2Q9Y4H2 1338 aa20.41■□□□□ 0.86
NOD1-202ENST00000411552 PTPN12Q05209 780 aaKnown RBP20.4■□□□□ 0.86
NOD1-202ENST00000411552 MROH5Q6ZUA9 1318 aa20.4■□□□□ 0.86
NOD1-202ENST00000411552 PODNQ7Z5L7 613 aa20.4■□□□□ 0.86
NOD1-202ENST00000411552 ITPRIPQ8IWB1 547 aa20.4■□□□□ 0.86
NOD1-202ENST00000411552 SMC1BQ8NDV3 1235 aa20.4■□□□□ 0.86
NOD1-202ENST00000411552 PANK1Q8TE04 598 aa20.4■□□□□ 0.86
NOD1-202ENST00000411552 GNAI2P04899 355 aa20.39■□□□□ 0.85
NOD1-202ENST00000411552 FSTL1Q12841 308 aa20.39■□□□□ 0.85
NOD1-202ENST00000411552 EAPPQ56P03 285 aaPredicted RBP20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms