RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 RIC3Q7Z5B4 369 aa18.5■□□□□ 0.55
HLA-DQB2-229ENST00000411527 TBC1D16Q8TBP0 767 aa18.5■□□□□ 0.55
HLA-DQB2-229ENST00000411527 DCPSQ96C86 337 aaKnown RBP18.5■□□□□ 0.55
HLA-DQB2-229ENST00000411527 ZIC5Q96T25 663 aa18.5■□□□□ 0.55
HLA-DQB2-229ENST00000411527 ZC3H12CQ9C0D7 883 aaKnown RBP18.49■□□□□ 0.55
HLA-DQB2-229ENST00000411527 MBIPQ9NS73 344 aa18.49■□□□□ 0.55
HLA-DQB2-229ENST00000411527 RTL9Q8NET4 1388 aa18.49■□□□□ 0.55
HLA-DQB2-229ENST00000411527 C2orf69Q8N8R5 385 aa18.48■□□□□ 0.55
HLA-DQB2-229ENST00000411527 ZBTB38Q8NAP3 1195 aaPredicted RBP18.48■□□□□ 0.55
HLA-DQB2-229ENST00000411527 MCOLN1Q9GZU1 580 aa18.48■□□□□ 0.55
HLA-DQB2-229ENST00000411527 PHAXQ9H814 394 aaKnown RBP18.48■□□□□ 0.55
HLA-DQB2-229ENST00000411527 GBA2Q9HCG7 927 aaPredicted RBP18.48■□□□□ 0.55
HLA-DQB2-229ENST00000411527 SEC31BQ9NQW1 1179 aa18.48■□□□□ 0.55
HLA-DQB2-229ENST00000411527 ADM5C9JUS6 153 aa18.47■□□□□ 0.55
HLA-DQB2-229ENST00000411527 G3V3G9 751 aa18.47■□□□□ 0.55
HLA-DQB2-229ENST00000411527 ELL2O00472 640 aaPredicted RBP18.47■□□□□ 0.55
HLA-DQB2-229ENST00000411527 MLLT1Q03111 559 aaPredicted RBP18.47■□□□□ 0.55
HLA-DQB2-229ENST00000411527 GOLGA2Q08379 1002 aa18.47■□□□□ 0.55
HLA-DQB2-229ENST00000411527 DCAF8Q5TAQ9 597 aa18.47■□□□□ 0.55
HLA-DQB2-229ENST00000411527 RGMBQ6NW40 437 aa18.47■□□□□ 0.55
HLA-DQB2-229ENST00000411527 ANKIB1Q9P2G1 1089 aa18.47■□□□□ 0.55
HLA-DQB2-229ENST00000411527 SCN9AQ15858 1988 aa18.46■□□□□ 0.55
HLA-DQB2-229ENST00000411527 VIL1P09327 827 aaKnown RBP18.46■□□□□ 0.55
HLA-DQB2-229ENST00000411527 HSP90B1P14625 803 aaKnown RBP18.46■□□□□ 0.55
HLA-DQB2-229ENST00000411527 KIF4BQ2VIQ3 1234 aa18.46■□□□□ 0.55
HLA-DQB2-229ENST00000411527 MYD88Q99836 296 aa18.46■□□□□ 0.55
HLA-DQB2-229ENST00000411527 PODXL2Q9NZ53 605 aa18.46■□□□□ 0.55
HLA-DQB2-229ENST00000411527 FAM155AB1AL88 458 aaPredicted RBP18.45■□□□□ 0.54
HLA-DQB2-229ENST00000411527 UFL1O94874 794 aa18.45■□□□□ 0.54
HLA-DQB2-229ENST00000411527 ZNF853P0CG23 659 aa18.45■□□□□ 0.54
HLA-DQB2-229ENST00000411527 RGS19P49795 217 aa18.45■□□□□ 0.54
HLA-DQB2-229ENST00000411527 DGKZQ13574 1117 aa18.45■□□□□ 0.54
HLA-DQB2-229ENST00000411527 GGA1Q9UJY5 639 aa18.45■□□□□ 0.54
HLA-DQB2-229ENST00000411527 ZNF157P51786 506 aaPredicted RBP18.44■□□□□ 0.54
HLA-DQB2-229ENST00000411527 CCDC152Q4G0S7 254 aa18.44■□□□□ 0.54
HLA-DQB2-229ENST00000411527 SULF1Q8IWU6 871 aa18.44■□□□□ 0.54
HLA-DQB2-229ENST00000411527 JARID2Q92833 1246 aaPredicted RBP18.44■□□□□ 0.54
HLA-DQB2-229ENST00000411527 CCDC102AQ96A19 550 aa18.44■□□□□ 0.54
HLA-DQB2-229ENST00000411527 PDE8AO60658 829 aa18.43■□□□□ 0.54
HLA-DQB2-229ENST00000411527 PCCAP05165 728 aaPredicted RBP18.43■□□□□ 0.54
HLA-DQB2-229ENST00000411527 GNAI1P63096 354 aa18.43■□□□□ 0.54
HLA-DQB2-229ENST00000411527 KIF23Q02241 960 aaPredicted RBP18.43■□□□□ 0.54
HLA-DQB2-229ENST00000411527 CCDC191Q8NCU4 936 aa18.43■□□□□ 0.54
HLA-DQB2-229ENST00000411527 CCDC85AQ96PX6 553 aaPredicted RBP18.43■□□□□ 0.54
HLA-DQB2-229ENST00000411527 IFT57Q9NWB7 429 aa18.43■□□□□ 0.54
HLA-DQB2-229ENST00000411527 GGA3Q9NZ52 723 aa18.43■□□□□ 0.54
HLA-DQB2-229ENST00000411527 ASTN2O75129 1339 aaPredicted RBP18.43■□□□□ 0.54
HLA-DQB2-229ENST00000411527 APAF1O14727 1248 aa18.42■□□□□ 0.54
HLA-DQB2-229ENST00000411527 CWC25Q9NXE8 425 aaPredicted RBP18.42■□□□□ 0.54
HLA-DQB2-229ENST00000411527 CALD1Q05682 793 aaKnown RBP18.41■□□□□ 0.54
HLA-DQB2-229ENST00000411527 RSBN1LQ6PCB5 846 aaPredicted RBP18.41■□□□□ 0.54
HLA-DQB2-229ENST00000411527 AGBL3Q8NEM8 1001 aa18.41■□□□□ 0.54
HLA-DQB2-229ENST00000411527 ZNF280AP59817 542 aaPredicted RBP18.4■□□□□ 0.54
HLA-DQB2-229ENST00000411527 SCARF1Q14162 830 aa18.4■□□□□ 0.54
HLA-DQB2-229ENST00000411527 ANGEL2Q5VTE6 544 aaKnown RBP18.4■□□□□ 0.54
HLA-DQB2-229ENST00000411527 ANKRD18AQ8IVF6 992 aa18.4■□□□□ 0.54
HLA-DQB2-229ENST00000411527 C8orf58Q8NAV2 365 aa18.4■□□□□ 0.54
HLA-DQB2-229ENST00000411527 CDCA5Q96FF9 252 aa18.4■□□□□ 0.54
HLA-DQB2-229ENST00000411527 METTL22Q9BUU2 404 aaPredicted RBP18.4■□□□□ 0.54
HLA-DQB2-229ENST00000411527 AKAP11Q9UKA4 1901 aa18.4■□□□□ 0.54
HLA-DQB2-229ENST00000411527 PSME4Q14997 1843 aa18.39■□□□□ 0.54
HLA-DQB2-229ENST00000411527 TRPA1O75762 1119 aa18.39■□□□□ 0.53
HLA-DQB2-229ENST00000411527 DDX58O95786 925 aaKnown RBP18.39■□□□□ 0.53
HLA-DQB2-229ENST00000411527 RNF186Q9NXI6 227 aa18.39■□□□□ 0.53
HLA-DQB2-229ENST00000411527 SAGE1Q9NXZ1 904 aa18.39■□□□□ 0.53
HLA-DQB2-229ENST00000411527 XDHP47989 1333 aa18.39■□□□□ 0.53
HLA-DQB2-229ENST00000411527 SLC10A3P09131 477 aa18.38■□□□□ 0.53
HLA-DQB2-229ENST00000411527 USP17L8P0C7I0 530 aa18.38■□□□□ 0.53
HLA-DQB2-229ENST00000411527 ATP2B4P23634 1241 aa18.38■□□□□ 0.53
HLA-DQB2-229ENST00000411527 CCDC30Q5VVM6 783 aa18.38■□□□□ 0.53
HLA-DQB2-229ENST00000411527 CSRNP1Q96S65 589 aa18.38■□□□□ 0.53
HLA-DQB2-229ENST00000411527 PRKRIP1Q9H875 184 aaPredicted RBP18.38■□□□□ 0.53
HLA-DQB2-229ENST00000411527 GMLQ99445 158 aa18.37■□□□□ 0.53
HLA-DQB2-229ENST00000411527 CHMP4AQ9BY43 222 aa18.37■□□□□ 0.53
HLA-DQB2-229ENST00000411527 MYOZ2Q9NPC6 264 aa18.37■□□□□ 0.53
HLA-DQB2-229ENST00000411527 MAP3K2Q9Y2U5 619 aa18.37■□□□□ 0.53
HLA-DQB2-229ENST00000411527 USP17L3A6NCW0 530 aa18.36■□□□□ 0.53
HLA-DQB2-229ENST00000411527 USP17L4A6NCW7 530 aa18.36■□□□□ 0.53
HLA-DQB2-229ENST00000411527 ZNF609O15014 1411 aa18.36■□□□□ 0.53
HLA-DQB2-229ENST00000411527 USP17L1Q7RTZ2 530 aa18.36■□□□□ 0.53
HLA-DQB2-229ENST00000411527 PODNQ7Z5L7 613 aa18.36■□□□□ 0.53
HLA-DQB2-229ENST00000411527 CDC5LQ99459 802 aaKnown RBP18.36■□□□□ 0.53
HLA-DQB2-229ENST00000411527 WTIPA6NIX2 430 aaPredicted RBP18.35■□□□□ 0.53
HLA-DQB2-229ENST00000411527 CTSWP56202 376 aa18.35■□□□□ 0.53
HLA-DQB2-229ENST00000411527 KSR2Q6VAB6 950 aa18.35■□□□□ 0.53
HLA-DQB2-229ENST00000411527 SPEF2Q9C093 1822 aa18.35■□□□□ 0.53
HLA-DQB2-229ENST00000411527 PI4KAP2A4QPH2 592 aa18.34■□□□□ 0.53
HLA-DQB2-229ENST00000411527 IGKV5-2P06315 115 aa18.34■□□□□ 0.53
HLA-DQB2-229ENST00000411527 FKBP1BP68106 108 aa18.34■□□□□ 0.53
HLA-DQB2-229ENST00000411527 TSPYL6Q8N831 410 aa18.34■□□□□ 0.53
HLA-DQB2-229ENST00000411527 PI4KAP1Q8N8J0 262 aa18.34■□□□□ 0.53
HLA-DQB2-229ENST00000411527 TTLL11Q8NHH1 800 aa18.34■□□□□ 0.53
HLA-DQB2-229ENST00000411527 SCAF8Q9UPN6 1271 aaKnown RBP18.34■□□□□ 0.53
HLA-DQB2-229ENST00000411527 MYH3P11055 1940 aa18.33■□□□□ 0.53
HLA-DQB2-229ENST00000411527 PITPNM2Q9BZ72 1349 aa18.33■□□□□ 0.53
HLA-DQB2-229ENST00000411527 SLC34A2O95436 690 aa18.33■□□□□ 0.52
HLA-DQB2-229ENST00000411527 RASAL3Q86YV0 1011 aa18.33■□□□□ 0.52
HLA-DQB2-229ENST00000411527 REM2Q8IYK8 340 aaPredicted RBP18.33■□□□□ 0.52
HLA-DQB2-229ENST00000411527 BSDC1Q9NW68 430 aaPredicted RBP18.33■□□□□ 0.52
HLA-DQB2-229ENST00000411527 MINPP1Q9UNW1 487 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms