RNA–Protein interactions for RNA: ENST00000410517.1

RNU6-1140P-201, Transcript of RNA, U6 small nuclear 1140, pseudogene, humanhuman

BASIC

Gene RNU6-1140P, Length 106 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1140P-201ENST00000410517 FOSL1P15407 271 aa4.78□□□□□ -1.64
RNU6-1140P-201ENST00000410517 CD68P34810 354 aaPredicted RBP4.78□□□□□ -1.64
RNU6-1140P-201ENST00000410517 BUD31P41223 144 aaPredicted RBP4.78□□□□□ -1.64
RNU6-1140P-201ENST00000410517 PDE4CQ08493 712 aa4.78□□□□□ -1.64
RNU6-1140P-201ENST00000410517 FBXL6Q8N531 539 aa4.78□□□□□ -1.64
RNU6-1140P-201ENST00000410517 NGLY1Q96IV0 654 aa4.78□□□□□ -1.64
RNU6-1140P-201ENST00000410517 PPME1Q9Y570 386 aa4.78□□□□□ -1.64
RNU6-1140P-201ENST00000410517 PPP1R12BO60237 982 aaPredicted RBP4.77□□□□□ -1.65
RNU6-1140P-201ENST00000410517 SOX11P35716 441 aa4.77□□□□□ -1.65
RNU6-1140P-201ENST00000410517 NRLP54845 237 aa4.77□□□□□ -1.65
RNU6-1140P-201ENST00000410517 SEMA3FQ13275 785 aa4.77□□□□□ -1.65
RNU6-1140P-201ENST00000410517 IRF5Q13568 498 aa4.77□□□□□ -1.65
RNU6-1140P-201ENST00000410517 KRTAP19-4Q3LI73 84 aa4.77□□□□□ -1.65
RNU6-1140P-201ENST00000410517 POTEAQ6S8J7 498 aa4.77□□□□□ -1.65
RNU6-1140P-201ENST00000410517 FLCNQ8NFG4 579 aa4.77□□□□□ -1.65
RNU6-1140P-201ENST00000410517 MUC3BQ9H195 1237 aa4.77□□□□□ -1.65
RNU6-1140P-201ENST00000410517 KCNK4Q9NYG8 393 aa4.77□□□□□ -1.65
RNU6-1140P-201ENST00000410517 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.77□□□□□ -1.65
RNU6-1140P-201ENST00000410517 LOC102724428A0A0B4J2F2 783 aa4.76□□□□□ -1.65
RNU6-1140P-201ENST00000410517 LINC01387J3KSC0 135 aa4.76□□□□□ -1.65
RNU6-1140P-201ENST00000410517 PIK3CDO00329 1044 aa4.76□□□□□ -1.65
RNU6-1140P-201ENST00000410517 GHRHP01286 108 aa4.76□□□□□ -1.65
RNU6-1140P-201ENST00000410517 GRNP28799 593 aaKnown RBP4.76□□□□□ -1.65
RNU6-1140P-201ENST00000410517 SIK1P57059 783 aa4.76□□□□□ -1.65
RNU6-1140P-201ENST00000410517 DUOXA2Q1HG44 320 aa4.76□□□□□ -1.65
RNU6-1140P-201ENST00000410517 IER5Q5VY09 327 aa4.76□□□□□ -1.65
RNU6-1140P-201ENST00000410517 KIAA1211Q6ZU35 1233 aa4.76□□□□□ -1.65
RNU6-1140P-201ENST00000410517 AGBL5Q8NDL9 886 aa4.76□□□□□ -1.65
RNU6-1140P-201ENST00000410517 OSBPL1AQ9BXW6 950 aa4.76□□□□□ -1.65
RNU6-1140P-201ENST00000410517 KRTAP9-3Q9BYQ3 159 aa4.76□□□□□ -1.65
RNU6-1140P-201ENST00000410517 TRIM33Q9UPN9 1127 aa4.76□□□□□ -1.65
RNU6-1140P-201ENST00000410517 SKIP12755 728 aa4.75□□□□□ -1.65
RNU6-1140P-201ENST00000410517 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.75□□□□□ -1.65
RNU6-1140P-201ENST00000410517 COL26A1Q96A83 441 aa4.75□□□□□ -1.65
RNU6-1140P-201ENST00000410517 SLC38A3Q99624 504 aa4.75□□□□□ -1.65
RNU6-1140P-201ENST00000410517 RBSNQ9H1K0 784 aa4.75□□□□□ -1.65
RNU6-1140P-201ENST00000410517 COG6Q9Y2V7 657 aa4.75□□□□□ -1.65
RNU6-1140P-201ENST00000410517 CARMIL2Q6F5E8 1435 aa4.74□□□□□ -1.65
RNU6-1140P-201ENST00000410517 TGFBR3LH3BV60 316 aa4.74□□□□□ -1.65
RNU6-1140P-201ENST00000410517 BIN1O00499 593 aa4.74□□□□□ -1.65
RNU6-1140P-201ENST00000410517 F13BP05160 661 aa4.74□□□□□ -1.65
RNU6-1140P-201ENST00000410517 CDC25BP30305 580 aa4.74□□□□□ -1.65
RNU6-1140P-201ENST00000410517 ABL2P42684 1182 aa4.74□□□□□ -1.65
RNU6-1140P-201ENST00000410517 TXNDC11Q6PKC3 985 aa4.74□□□□□ -1.65
RNU6-1140P-201ENST00000410517 TPCN2Q8NHX9 752 aa4.74□□□□□ -1.65
RNU6-1140P-201ENST00000410517 CLUAP1Q96AJ1 413 aa4.74□□□□□ -1.65
RNU6-1140P-201ENST00000410517 NSUN5Q96P11 429 aaKnown RBP4.74□□□□□ -1.65
RNU6-1140P-201ENST00000410517 PAK6Q9NQU5 681 aaPredicted RBP4.74□□□□□ -1.65
RNU6-1140P-201ENST00000410517 BSDC1Q9NW68 430 aaPredicted RBP4.74□□□□□ -1.65
RNU6-1140P-201ENST00000410517 TLR7Q9NYK1 1049 aaKnown RBP4.74□□□□□ -1.65
RNU6-1140P-201ENST00000410517 DMGDHQ9UI17 866 aaKnown RBP4.74□□□□□ -1.65
RNU6-1140P-201ENST00000410517 INPP5BP32019 993 aa4.73□□□□□ -1.65
RNU6-1140P-201ENST00000410517 PREPP48147 710 aa4.73□□□□□ -1.65
RNU6-1140P-201ENST00000410517 IDH3AP50213 366 aa4.73□□□□□ -1.65
RNU6-1140P-201ENST00000410517 NCOA4Q13772 614 aa4.73□□□□□ -1.65
RNU6-1140P-201ENST00000410517 CHMP7Q8WUX9 453 aaPredicted RBP4.73□□□□□ -1.65
RNU6-1140P-201ENST00000410517 CARD10Q9BWT7 1032 aa4.73□□□□□ -1.65
RNU6-1140P-201ENST00000410517 BCS1LQ9Y276 419 aa4.73□□□□□ -1.65
RNU6-1140P-201ENST00000410517 DDX3YO15523 660 aaKnown RBP4.72□□□□□ -1.65
RNU6-1140P-201ENST00000410517 CYP26A1O43174 497 aa4.72□□□□□ -1.65
RNU6-1140P-201ENST00000410517 LZTS3O60299 673 aaPredicted RBP4.72□□□□□ -1.65
RNU6-1140P-201ENST00000410517 PSAPP07602 524 aa4.72□□□□□ -1.65
RNU6-1140P-201ENST00000410517 CCDC102BQ68D86 513 aa4.72□□□□□ -1.65
RNU6-1140P-201ENST00000410517 CACTIN-AS1Q8N1I8 211 aa4.72□□□□□ -1.65
RNU6-1140P-201ENST00000410517 UBASH3BQ8TF42 649 aa4.72□□□□□ -1.65
RNU6-1140P-201ENST00000410517 CALR3Q96L12 384 aaKnown RBP4.72□□□□□ -1.65
RNU6-1140P-201ENST00000410517 GDPD2Q9HCC8 539 aa4.72□□□□□ -1.65
RNU6-1140P-201ENST00000410517 C21orf2O43822 256 aa4.71□□□□□ -1.66
RNU6-1140P-201ENST00000410517 GAS2O43903 313 aaKnown RBP4.71□□□□□ -1.66
RNU6-1140P-201ENST00000410517 MAP4P27816 1152 aaKnown RBP4.71□□□□□ -1.66
RNU6-1140P-201ENST00000410517 RXRBP28702 533 aa4.71□□□□□ -1.66
RNU6-1140P-201ENST00000410517 CPSF6Q16630 551 aaKnown RBP eCLIP4.71□□□□□ -1.66
RNU6-1140P-201ENST00000410517 RTN1Q16799 776 aa4.71□□□□□ -1.66
RNU6-1140P-201ENST00000410517 ANKRD34AQ69YU3 496 aa4.71□□□□□ -1.66
RNU6-1140P-201ENST00000410517 DEPDC4Q8N2C3 294 aa4.71□□□□□ -1.66
RNU6-1140P-201ENST00000410517 ARID3AQ99856 593 aa4.71□□□□□ -1.66
RNU6-1140P-201ENST00000410517 HIF3AQ9Y2N7 669 aa4.71□□□□□ -1.66
RNU6-1140P-201ENST00000410517 ATAD2Q6PL18 1390 aa4.7□□□□□ -1.66
RNU6-1140P-201ENST00000410517 PPP1R15AO75807 674 aaPredicted RBP4.7□□□□□ -1.66
RNU6-1140P-201ENST00000410517 ARSDP51689 593 aa4.7□□□□□ -1.66
RNU6-1140P-201ENST00000410517 SHISA5Q8N114 240 aa4.7□□□□□ -1.66
RNU6-1140P-201ENST00000410517 TSEN2Q8NCE0 465 aaKnown RBP4.7□□□□□ -1.66
RNU6-1140P-201ENST00000410517 C2orf49Q9BVC5 232 aaPredicted RBP4.7□□□□□ -1.66
RNU6-1140P-201ENST00000410517 LACRTQ9GZZ8 138 aa4.7□□□□□ -1.66
RNU6-1140P-201ENST00000410517 C11orf16Q9NQ32 467 aa4.7□□□□□ -1.66
RNU6-1140P-201ENST00000410517 KIAA1024Q9UPX6 916 aa4.7□□□□□ -1.66
RNU6-1140P-201ENST00000410517 ACIN1Q9UKV3 1341 aaKnown RBP4.7□□□□□ -1.66
RNU6-1140P-201ENST00000410517 PATL2C9JE40 543 aaKnown RBP4.69□□□□□ -1.66
RNU6-1140P-201ENST00000410517 FSCN2O14926 492 aa4.69□□□□□ -1.66
RNU6-1140P-201ENST00000410517 ZBTB7BO15156 539 aaPredicted RBP4.69□□□□□ -1.66
RNU6-1140P-201ENST00000410517 PLCL1Q15111 1095 aa4.69□□□□□ -1.66
RNU6-1140P-201ENST00000410517 SGO2Q562F6 1265 aa4.69□□□□□ -1.66
RNU6-1140P-201ENST00000410517 FDX2Q6P4F2 183 aa4.69□□□□□ -1.66
RNU6-1140P-201ENST00000410517 TRIM50Q86XT4 487 aa4.69□□□□□ -1.66
RNU6-1140P-201ENST00000410517 FNBP4Q8N3X1 1017 aaPredicted RBP4.69□□□□□ -1.66
RNU6-1140P-201ENST00000410517 CCDC82Q8N4S0 544 aa4.69□□□□□ -1.66
RNU6-1140P-201ENST00000410517 SCG3Q8WXD2 468 aaKnown RBP4.69□□□□□ -1.66
RNU6-1140P-201ENST00000410517 FOXD4L4Q8WXT5 416 aaPredicted RBP4.69□□□□□ -1.66
RNU6-1140P-201ENST00000410517 FAM168AQ92567 244 aa4.69□□□□□ -1.66
RNU6-1140P-201ENST00000410517 TOX2Q96NM4 488 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms