RNA–Protein interactions for RNA: ENST00000410044.5

LSM5-207, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-207ENST00000410044 PPP4R2Q9NY27 417 aa18.88■□□□□ 0.61
LSM5-207ENST00000410044 MINPP1Q9UNW1 487 aa18.88■□□□□ 0.61
LSM5-207ENST00000410044 SPEF2Q9C093 1822 aa18.88■□□□□ 0.61
LSM5-207ENST00000410044 CACNA1SQ13698 1873 aa18.88■□□□□ 0.61
LSM5-207ENST00000410044 LRRC37AA6NMS7 1700 aa18.87■□□□□ 0.61
LSM5-207ENST00000410044 RAB11FIP3O75154 756 aa18.87■□□□□ 0.61
LSM5-207ENST00000410044 GRIPAP1Q4V328 841 aa18.87■□□□□ 0.61
LSM5-207ENST00000410044 CNNM1Q9NRU3 951 aa18.87■□□□□ 0.61
LSM5-207ENST00000410044 MROH5Q6ZUA9 1318 aa18.86■□□□□ 0.61
LSM5-207ENST00000410044 SMC5Q8IY18 1101 aa18.86■□□□□ 0.61
LSM5-207ENST00000410044 GCC1Q96CN9 775 aa18.86■□□□□ 0.61
LSM5-207ENST00000410044 ARFGEF1Q9Y6D6 1849 aa18.86■□□□□ 0.61
LSM5-207ENST00000410044 SASH1O94885 1247 aa18.85■□□□□ 0.61
LSM5-207ENST00000410044 ERC1Q8IUD2 1116 aa18.85■□□□□ 0.61
LSM5-207ENST00000410044 ANKRD2Q9GZV1 360 aa18.85■□□□□ 0.61
LSM5-207ENST00000410044 SIL1Q9H173 461 aa18.85■□□□□ 0.61
LSM5-207ENST00000410044 PODXL2Q9NZ53 605 aa18.85■□□□□ 0.61
LSM5-207ENST00000410044 CHRNDQ07001 517 aa18.84■□□□□ 0.61
LSM5-207ENST00000410044 SOGA3Q5TF21 947 aa18.84■□□□□ 0.61
LSM5-207ENST00000410044 VGLL2Q8N8G2 317 aa18.84■□□□□ 0.61
LSM5-207ENST00000410044 EXOC6BQ9Y2D4 811 aa18.84■□□□□ 0.61
LSM5-207ENST00000410044 SNED1Q8TER0 1413 aa18.83■□□□□ 0.61
LSM5-207ENST00000410044 A0A1B0GUL6 1792 aa18.83■□□□□ 0.61
LSM5-207ENST00000410044 PDE8BO95263 885 aa18.83■□□□□ 0.6
LSM5-207ENST00000410044 TMX4Q9H1E5 349 aaPredicted RBP18.83■□□□□ 0.6
LSM5-207ENST00000410044 GPR108Q9NPR9 543 aa18.83■□□□□ 0.6
LSM5-207ENST00000410044 CEP126Q9P2H0 1117 aa18.83■□□□□ 0.6
LSM5-207ENST00000410044 C21orf2O43822 256 aa18.82■□□□□ 0.6
LSM5-207ENST00000410044 RHPN1Q8TCX5 695 aa18.82■□□□□ 0.6
LSM5-207ENST00000410044 KIF1BPQ96EK5 621 aa18.82■□□□□ 0.6
LSM5-207ENST00000410044 BCS1LQ9Y276 419 aa18.82■□□□□ 0.6
LSM5-207ENST00000410044 LEMD3Q9Y2U8 911 aa18.82■□□□□ 0.6
LSM5-207ENST00000410044 XDHP47989 1333 aa18.81■□□□□ 0.6
LSM5-207ENST00000410044 KDM2BQ8NHM5 1336 aa18.81■□□□□ 0.6
LSM5-207ENST00000410044 LTBP1Q14766 1721 aa18.81■□□□□ 0.6
LSM5-207ENST00000410044 GPSM2P81274 684 aa18.81■□□□□ 0.6
LSM5-207ENST00000410044 UBE4AQ14139 1066 aa18.81■□□□□ 0.6
LSM5-207ENST00000410044 CCDC93Q567U6 631 aa18.81■□□□□ 0.6
LSM5-207ENST00000410044 METTL24Q5JXM2 366 aa18.81■□□□□ 0.6
LSM5-207ENST00000410044 RTKN2Q8IZC4 609 aa18.81■□□□□ 0.6
LSM5-207ENST00000410044 MPNDQ8N594 471 aa18.81■□□□□ 0.6
LSM5-207ENST00000410044 CCDC136Q96JN2 1154 aa18.81■□□□□ 0.6
LSM5-207ENST00000410044 RTFDC1Q9BY42 306 aaPredicted RBP18.81■□□□□ 0.6
LSM5-207ENST00000410044 FGFR2P21802 821 aa18.8■□□□□ 0.6
LSM5-207ENST00000410044 ATP2B4P23634 1241 aa18.8■□□□□ 0.6
LSM5-207ENST00000410044 TFCP2Q12800 502 aa18.8■□□□□ 0.6
LSM5-207ENST00000410044 OS9Q13438 667 aaPredicted RBP18.8■□□□□ 0.6
LSM5-207ENST00000410044 OLFM4Q6UX06 510 aa18.8■□□□□ 0.6
LSM5-207ENST00000410044 NSFL1CQ9UNZ2 370 aaKnown RBP18.8■□□□□ 0.6
LSM5-207ENST00000410044 FER1L6Q2WGJ9 1857 aa18.8■□□□□ 0.6
LSM5-207ENST00000410044 C15orf52Q6ZUT6 534 aaKnown RBP18.79■□□□□ 0.6
LSM5-207ENST00000410044 SLC51AQ86UW1 340 aa18.79■□□□□ 0.6
LSM5-207ENST00000410044 HELBQ8NG08 1087 aaPredicted RBP18.79■□□□□ 0.6
LSM5-207ENST00000410044 LRRCC1Q9C099 1032 aa18.79■□□□□ 0.6
LSM5-207ENST00000410044 AKAP2Q9Y2D5 859 aa18.79■□□□□ 0.6
LSM5-207ENST00000410044 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.79■□□□□ 0.6
LSM5-207ENST00000410044 TAF5LO75529 589 aa18.78■□□□□ 0.6
LSM5-207ENST00000410044 CENPQQ7L2Z9 268 aaPredicted RBP18.78■□□□□ 0.6
LSM5-207ENST00000410044 TBC1D16Q8TBP0 767 aa18.78■□□□□ 0.6
LSM5-207ENST00000410044 PSMD1Q99460 953 aa18.78■□□□□ 0.6
LSM5-207ENST00000410044 VPS33BQ9H267 617 aa18.78■□□□□ 0.6
LSM5-207ENST00000410044 ANKIB1Q9P2G1 1089 aa18.78■□□□□ 0.6
LSM5-207ENST00000410044 POLLQ9UGP5 575 aa18.78■□□□□ 0.6
LSM5-207ENST00000410044 PUM3Q15397 648 aaKnown RBP18.77■□□□□ 0.6
LSM5-207ENST00000410044 B4GALNT3Q6L9W6 998 aa18.77■□□□□ 0.6
LSM5-207ENST00000410044 DPP8Q6V1X1 898 aaPredicted RBP18.77■□□□□ 0.6
LSM5-207ENST00000410044 SUPT20HQ8NEM7 779 aa18.77■□□□□ 0.6
LSM5-207ENST00000410044 ZNF219Q9P2Y4 722 aaPredicted RBP18.77■□□□□ 0.6
LSM5-207ENST00000410044 GGA1Q9UJY5 639 aa18.77■□□□□ 0.6
LSM5-207ENST00000410044 ZNF804BA4D1E1 1349 aa18.76■□□□□ 0.59
LSM5-207ENST00000410044 LTBP3Q9NS15 1303 aa18.76■□□□□ 0.59
LSM5-207ENST00000410044 IRS2Q9Y4H2 1338 aa18.76■□□□□ 0.59
LSM5-207ENST00000410044 YBX3P16989 372 aaKnown RBP eCLIP18.76■□□□□ 0.596e-9■□□□□ 9
LSM5-207ENST00000410044 NUCB1Q02818 461 aa18.76■□□□□ 0.59
LSM5-207ENST00000410044 TNNI3KQ59H18 835 aa18.76■□□□□ 0.59
LSM5-207ENST00000410044 CLASRPQ8N2M8 674 aaKnown RBP18.76■□□□□ 0.59
LSM5-207ENST00000410044 LPIN2Q92539 896 aa18.76■□□□□ 0.59
LSM5-207ENST00000410044 FPGT-TNNI3KV9GXZ4 949 aa18.76■□□□□ 0.59
LSM5-207ENST00000410044 DUOX1Q9NRD9 1551 aa18.76■□□□□ 0.59
LSM5-207ENST00000410044 WTIPA6NIX2 430 aaPredicted RBP18.75■□□□□ 0.59
LSM5-207ENST00000410044 FKBP4Q02790 459 aaKnown RBP eCLIP18.75■□□□□ 0.59
LSM5-207ENST00000410044 ATP2B3Q16720 1220 aa18.75■□□□□ 0.59
LSM5-207ENST00000410044 ANKRD45Q5TZF3 282 aa18.75■□□□□ 0.59
LSM5-207ENST00000410044 EAF2Q96CJ1 260 aaPredicted RBP18.75■□□□□ 0.59
LSM5-207ENST00000410044 WWC3Q9ULE0 1092 aa18.75■□□□□ 0.59
LSM5-207ENST00000410044 GTF3C3Q9Y5Q9 886 aa18.75■□□□□ 0.59
LSM5-207ENST00000410044 A0A1B0GUL7 405 aa18.74■□□□□ 0.59
LSM5-207ENST00000410044 SNAP23O00161 211 aa18.74■□□□□ 0.59
LSM5-207ENST00000410044 ZBTB22O15209 634 aa18.74■□□□□ 0.59
LSM5-207ENST00000410044 UFL1O94874 794 aa18.74■□□□□ 0.59
LSM5-207ENST00000410044 IFIT1P09914 478 aaKnown RBP18.74■□□□□ 0.59
LSM5-207ENST00000410044 TIMM10P62072 90 aa18.74■□□□□ 0.59
LSM5-207ENST00000410044 IL1RAPL2Q9NP60 686 aa18.74■□□□□ 0.59
LSM5-207ENST00000410044 C6orf229H3BNL8 230 aa18.73■□□□□ 0.59
LSM5-207ENST00000410044 APBB1O00213 710 aa18.73■□□□□ 0.59
LSM5-207ENST00000410044 NFKBIEO00221 500 aa18.73■□□□□ 0.59
LSM5-207ENST00000410044 SMARCA5O60264 1052 aaPredicted RBP18.73■□□□□ 0.59
LSM5-207ENST00000410044 SLC5A1P13866 664 aa18.73■□□□□ 0.59
LSM5-207ENST00000410044 CHD1LQ86WJ1 897 aa18.73■□□□□ 0.59
LSM5-207ENST00000410044 EYA3Q99504 573 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms