RNA–Protein interactions for RNA: ENST00000409860.1

C4orf48-202, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C4orf48, Length 477 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-202ENST00000409860 MINPP1Q9UNW1 487 aa25.58■■□□□ 1.69
C4orf48-202ENST00000409860 IL15P40933 162 aaPredicted RBP25.57■■□□□ 1.68
C4orf48-202ENST00000409860 OS9Q13438 667 aaPredicted RBP25.57■■□□□ 1.68
C4orf48-202ENST00000409860 ANKRD2Q9GZV1 360 aa25.57■■□□□ 1.68
C4orf48-202ENST00000409860 NOP58Q9Y2X3 529 aaKnown RBP25.57■■□□□ 1.68
C4orf48-202ENST00000409860 RIPOR2Q9Y4F9 1068 aa25.57■■□□□ 1.68
C4orf48-202ENST00000409860 TAF1P21675 1872 aa25.57■■□□□ 1.68
C4orf48-202ENST00000409860 MROH5Q6ZUA9 1318 aa25.57■■□□□ 1.68
C4orf48-202ENST00000409860 SRCAPQ6ZRS2 3230 aa25.57■■□□□ 1.68
C4orf48-202ENST00000409860 CHRNDQ07001 517 aa25.56■■□□□ 1.68
C4orf48-202ENST00000409860 GPR162Q16538 588 aa25.56■■□□□ 1.68
C4orf48-202ENST00000409860 HSP90AB4PQ58FF6 505 aa25.56■■□□□ 1.68
C4orf48-202ENST00000409860 METTL24Q5JXM2 366 aa25.56■■□□□ 1.68
C4orf48-202ENST00000409860 OLFM4Q6UX06 510 aa25.56■■□□□ 1.68
C4orf48-202ENST00000409860 RTKN2Q8IZC4 609 aa25.56■■□□□ 1.68
C4orf48-202ENST00000409860 HDAC1Q13547 482 aaPredicted RBP25.55■■□□□ 1.68
C4orf48-202ENST00000409860 ERICH6BQ5W0A0 696 aa25.55■■□□□ 1.68
C4orf48-202ENST00000409860 SLC51AQ86UW1 340 aa25.55■■□□□ 1.68
C4orf48-202ENST00000409860 RWDD1Q9H446 243 aaPredicted RBP25.55■■□□□ 1.68
C4orf48-202ENST00000409860 ANKIB1Q9P2G1 1089 aa25.55■■□□□ 1.68
C4orf48-202ENST00000409860 XDHP47989 1333 aa25.55■■□□□ 1.68
C4orf48-202ENST00000409860 CACNA1SQ13698 1873 aa25.54■■□□□ 1.68
C4orf48-202ENST00000409860 YBX3P16989 372 aaKnown RBP eCLIP25.54■■□□□ 1.681e-9■■□□□ 13.3
C4orf48-202ENST00000409860 GPSM2P81274 684 aa25.54■■□□□ 1.68
C4orf48-202ENST00000409860 DPP8Q6V1X1 898 aaPredicted RBP25.54■■□□□ 1.68
C4orf48-202ENST00000409860 ATG9AQ7Z3C6 839 aa25.54■■□□□ 1.68
C4orf48-202ENST00000409860 MPNDQ8N594 471 aa25.54■■□□□ 1.68
C4orf48-202ENST00000409860 NSFL1CQ9UNZ2 370 aaKnown RBP25.54■■□□□ 1.68
C4orf48-202ENST00000409860 EXOC6BQ9Y2D4 811 aa25.53■■□□□ 1.68
C4orf48-202ENST00000409860 LRRC37AA6NMS7 1700 aa25.52■■□□□ 1.68
C4orf48-202ENST00000409860 ERC1Q8IUD2 1116 aa25.52■■□□□ 1.68
C4orf48-202ENST00000409860 PODXL2Q9NZ53 605 aa25.52■■□□□ 1.68
C4orf48-202ENST00000409860 CEP126Q9P2H0 1117 aa25.52■■□□□ 1.68
C4orf48-202ENST00000409860 SPEF2Q9C093 1822 aa25.51■■□□□ 1.67
C4orf48-202ENST00000409860 ATP2B4P23634 1241 aa25.51■■□□□ 1.67
C4orf48-202ENST00000409860 KCNJ4P48050 445 aa25.51■■□□□ 1.67
C4orf48-202ENST00000409860 HELBQ8NG08 1087 aaPredicted RBP25.51■■□□□ 1.67
C4orf48-202ENST00000409860 GGA1Q9UJY5 639 aa25.51■■□□□ 1.67
C4orf48-202ENST00000409860 DCAF8L1A6NGE4 600 aa25.5■■□□□ 1.67
C4orf48-202ENST00000409860 GRIN3BO60391 1043 aa25.5■■□□□ 1.67
C4orf48-202ENST00000409860 RAB11FIP3O75154 756 aa25.5■■□□□ 1.67
C4orf48-202ENST00000409860 SUPT20HQ8NEM7 779 aa25.5■■□□□ 1.67
C4orf48-202ENST00000409860 DCTPP1Q9H773 170 aa25.5■■□□□ 1.67
C4orf48-202ENST00000409860 ARFGEF1Q9Y6D6 1849 aa25.5■■□□□ 1.67
C4orf48-202ENST00000409860 SNED1Q8TER0 1413 aa25.49■■□□□ 1.67
C4orf48-202ENST00000409860 TAF5LO75529 589 aa25.49■■□□□ 1.67
C4orf48-202ENST00000409860 UFL1O94874 794 aa25.49■■□□□ 1.67
C4orf48-202ENST00000409860 FKBP4Q02790 459 aaKnown RBP eCLIP25.49■■□□□ 1.67
C4orf48-202ENST00000409860 ARHGAP27Q6ZUM4 889 aa25.49■■□□□ 1.67
C4orf48-202ENST00000409860 PSMD1Q99460 953 aa25.49■■□□□ 1.67
C4orf48-202ENST00000409860 TAOK3Q9H2K8 898 aa25.49■■□□□ 1.67
C4orf48-202ENST00000409860 LEMD3Q9Y2U8 911 aa25.49■■□□□ 1.67
C4orf48-202ENST00000409860 C6orf229H3BNL8 230 aa25.48■■□□□ 1.67
C4orf48-202ENST00000409860 PDE8BO95263 885 aa25.48■■□□□ 1.67
C4orf48-202ENST00000409860 VGLL2Q8N8G2 317 aa25.48■■□□□ 1.67
C4orf48-202ENST00000409860 TFCP2Q12800 502 aa25.47■■□□□ 1.67
C4orf48-202ENST00000409860 PUM3Q15397 648 aaKnown RBP25.47■■□□□ 1.67
C4orf48-202ENST00000409860 TBC1D16Q8TBP0 767 aa25.47■■□□□ 1.67
C4orf48-202ENST00000409860 GCC1Q96CN9 775 aa25.47■■□□□ 1.67
C4orf48-202ENST00000409860 EYA3Q99504 573 aa25.47■■□□□ 1.67
C4orf48-202ENST00000409860 RTFDC1Q9BY42 306 aaPredicted RBP25.47■■□□□ 1.67
C4orf48-202ENST00000409860 ZNF804BA4D1E1 1349 aa25.46■■□□□ 1.67
C4orf48-202ENST00000409860 LTBP3Q9NS15 1303 aa25.46■■□□□ 1.67
C4orf48-202ENST00000409860 APBB1O00213 710 aa25.46■■□□□ 1.67
C4orf48-202ENST00000409860 NFKBIEO00221 500 aa25.46■■□□□ 1.67
C4orf48-202ENST00000409860 SASH1O94885 1247 aa25.46■■□□□ 1.67
C4orf48-202ENST00000409860 UBE4AQ14139 1066 aa25.46■■□□□ 1.67
C4orf48-202ENST00000409860 KIF1BPQ96EK5 621 aa25.46■■□□□ 1.67
C4orf48-202ENST00000409860 POLLQ9UGP5 575 aa25.46■■□□□ 1.67
C4orf48-202ENST00000409860 AKAP2Q9Y2D5 859 aa25.46■■□□□ 1.67
C4orf48-202ENST00000409860 IGHDP01880 384 aa25.45■■□□□ 1.66
C4orf48-202ENST00000409860 RHPN1Q8TCX5 695 aa25.45■■□□□ 1.66
C4orf48-202ENST00000409860 ATP2B3Q16720 1220 aa25.44■■□□□ 1.66
C4orf48-202ENST00000409860 IFIT1P09914 478 aaKnown RBP25.43■■□□□ 1.66
C4orf48-202ENST00000409860 SLC5A1P13866 664 aa25.43■■□□□ 1.66
C4orf48-202ENST00000409860 RASSF7Q02833 373 aa25.43■■□□□ 1.66
C4orf48-202ENST00000409860 LPIN2Q92539 896 aa25.43■■□□□ 1.66
C4orf48-202ENST00000409860 LRRCC1Q9C099 1032 aa25.43■■□□□ 1.66
C4orf48-202ENST00000409860 DUOX1Q9NRD9 1551 aa25.43■■□□□ 1.66
C4orf48-202ENST00000409860 LTBP1Q14766 1721 aa25.43■■□□□ 1.66
C4orf48-202ENST00000409860 CCDC136Q96JN2 1154 aa25.42■■□□□ 1.66
C4orf48-202ENST00000409860 VPS33BQ9H267 617 aa25.42■■□□□ 1.66
C4orf48-202ENST00000409860 GPR108Q9NPR9 543 aa25.42■■□□□ 1.66
C4orf48-202ENST00000409860 ZNF277Q9NRM2 450 aaPredicted RBP25.42■■□□□ 1.66
C4orf48-202ENST00000409860 ZBTB47Q9UFB7 747 aaPredicted RBP25.42■■□□□ 1.66
C4orf48-202ENST00000409860 SNAP23O00161 211 aa25.41■■□□□ 1.66
C4orf48-202ENST00000409860 FGFR2P21802 821 aa25.41■■□□□ 1.66
C4orf48-202ENST00000409860 WASHC4Q2M389 1173 aa25.41■■□□□ 1.66
C4orf48-202ENST00000409860 GPR101Q96P66 508 aaPredicted RBP25.41■■□□□ 1.66
C4orf48-202ENST00000409860 ZC3H12CQ9C0D7 883 aaKnown RBP25.41■■□□□ 1.66
C4orf48-202ENST00000409860 PPP4R2Q9NY27 417 aa25.41■■□□□ 1.66
C4orf48-202ENST00000409860 MED23Q9ULK4 1368 aa25.41■■□□□ 1.66
C4orf48-202ENST00000409860 PPIP5K2O43314 1243 aa25.4■■□□□ 1.66
C4orf48-202ENST00000409860 TNNI3KQ59H18 835 aa25.4■■□□□ 1.66
C4orf48-202ENST00000409860 SMC5Q8IY18 1101 aa25.4■■□□□ 1.66
C4orf48-202ENST00000409860 CLASRPQ8N2M8 674 aaKnown RBP25.4■■□□□ 1.66
C4orf48-202ENST00000409860 IL1RAPL2Q9NP60 686 aa25.4■■□□□ 1.66
C4orf48-202ENST00000409860 FPGT-TNNI3KV9GXZ4 949 aa25.4■■□□□ 1.66
C4orf48-202ENST00000409860 ZNF609O15014 1411 aa25.39■■□□□ 1.66
C4orf48-202ENST00000409860 FER1L6Q2WGJ9 1857 aa25.39■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms