RNA–Protein interactions for RNA: ENST00000409498.6

SUMO1-207, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3 BASIC

Gene SUMO1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-207ENST00000409498 CCDC88AQ3V6T2 1871 aa18.5■□□□□ 0.55
SUMO1-207ENST00000409498 GPSM2P81274 684 aa18.49■□□□□ 0.55
SUMO1-207ENST00000409498 C20orf194Q5TEA3 1177 aa18.49■□□□□ 0.55
SUMO1-207ENST00000409498 DPP8Q6V1X1 898 aaPredicted RBP18.49■□□□□ 0.55
SUMO1-207ENST00000409498 COG6Q9Y2V7 657 aa18.49■□□□□ 0.55
SUMO1-207ENST00000409498 SPEF2Q9C093 1822 aa18.49■□□□□ 0.55
SUMO1-207ENST00000409498 ZC3H4Q9UPT8 1303 aaKnown RBP18.49■□□□□ 0.55
SUMO1-207ENST00000409498 PPP4R3CPQ6ZMV5 832 aa18.48■□□□□ 0.55
SUMO1-207ENST00000409498 ZBTB40Q9NUA8 1239 aa18.48■□□□□ 0.55
SUMO1-207ENST00000409498 FBXO3Q9UK99 471 aa18.48■□□□□ 0.55
SUMO1-207ENST00000409498 NSFL1CQ9UNZ2 370 aaKnown RBP18.48■□□□□ 0.55
SUMO1-207ENST00000409498 XDHP47989 1333 aa18.48■□□□□ 0.55
SUMO1-207ENST00000409498 IARSP41252 1262 aaKnown RBP18.47■□□□□ 0.55
SUMO1-207ENST00000409498 PTPN12Q05209 780 aaKnown RBP18.47■□□□□ 0.55
SUMO1-207ENST00000409498 C9orf131Q5VYM1 1079 aa18.47■□□□□ 0.55
SUMO1-207ENST00000409498 LDHAL6AQ6ZMR3 332 aa18.47■□□□□ 0.55
SUMO1-207ENST00000409498 ZNF594Q96JF6 807 aaPredicted RBP18.47■□□□□ 0.55
SUMO1-207ENST00000409498 ANKRD2Q9GZV1 360 aa18.47■□□□□ 0.55
SUMO1-207ENST00000409498 RIPOR2Q9Y4F9 1068 aa18.47■□□□□ 0.55
SUMO1-207ENST00000409498 ATP2B4P23634 1241 aa18.46■□□□□ 0.55
SUMO1-207ENST00000409498 ATP8B2P98198 1209 aa18.46■□□□□ 0.55
SUMO1-207ENST00000409498 TAF7LQ5H9L4 462 aa18.46■□□□□ 0.55
SUMO1-207ENST00000409498 TBC1D16Q8TBP0 767 aa18.46■□□□□ 0.55
SUMO1-207ENST00000409498 COPRSQ9NQ92 184 aa18.46■□□□□ 0.55
SUMO1-207ENST00000409498 POLLQ9UGP5 575 aa18.46■□□□□ 0.55
SUMO1-207ENST00000409498 A0A1B0GUL6 1792 aa18.45■□□□□ 0.54
SUMO1-207ENST00000409498 CHRNDQ07001 517 aa18.45■□□□□ 0.54
SUMO1-207ENST00000409498 KIAA2012Q0VF49 1180 aa18.45■□□□□ 0.54
SUMO1-207ENST00000409498 ZNF277Q9NRM2 450 aaPredicted RBP18.45■□□□□ 0.54
SUMO1-207ENST00000409498 RNF181Q9P0P0 153 aa18.45■□□□□ 0.54
SUMO1-207ENST00000409498 LEMD3Q9Y2U8 911 aa18.45■□□□□ 0.54
SUMO1-207ENST00000409498 POLA2Q14181 598 aa18.44■□□□□ 0.54
SUMO1-207ENST00000409498 PUS3Q9BZE2 481 aaKnown RBP18.44■□□□□ 0.54
SUMO1-207ENST00000409498 ANKIB1Q9P2G1 1089 aa18.44■□□□□ 0.54
SUMO1-207ENST00000409498 GGA1Q9UJY5 639 aa18.44■□□□□ 0.54
SUMO1-207ENST00000409498 EYA2O00167 538 aa18.43■□□□□ 0.54
SUMO1-207ENST00000409498 SRGAP3O43295 1099 aa18.43■□□□□ 0.54
SUMO1-207ENST00000409498 CIAO1O76071 339 aa18.43■□□□□ 0.54
SUMO1-207ENST00000409498 SSH3Q8TE77 659 aa18.43■□□□□ 0.54
SUMO1-207ENST00000409498 EYA3Q99504 573 aa18.43■□□□□ 0.54
SUMO1-207ENST00000409498 CNNM1Q9NRU3 951 aa18.43■□□□□ 0.54
SUMO1-207ENST00000409498 MROH5Q6ZUA9 1318 aa18.43■□□□□ 0.54
SUMO1-207ENST00000409498 PNMA6EA0A0J9YXQ4 647 aa18.42■□□□□ 0.54
SUMO1-207ENST00000409498 FZD9O00144 591 aa18.42■□□□□ 0.54
SUMO1-207ENST00000409498 LRRC24Q50LG9 513 aa18.42■□□□□ 0.54
SUMO1-207ENST00000409498 CEP85Q6P2H3 762 aa18.42■□□□□ 0.54
SUMO1-207ENST00000409498 C15orf52Q6ZUT6 534 aaKnown RBP18.42■□□□□ 0.54
SUMO1-207ENST00000409498 KLHDC4Q8TBB5 520 aa18.42■□□□□ 0.54
SUMO1-207ENST00000409498 COL4A5P29400 1685 aa18.41■□□□□ 0.54
SUMO1-207ENST00000409498 TIAM2Q8IVF5 1701 aa18.41■□□□□ 0.54
SUMO1-207ENST00000409498 UFL1O94874 794 aa18.41■□□□□ 0.54
SUMO1-207ENST00000409498 WASHC4Q2M389 1173 aa18.41■□□□□ 0.54
SUMO1-207ENST00000409498 ATG9AQ7Z3C6 839 aa18.41■□□□□ 0.54
SUMO1-207ENST00000409498 RPAP2Q8IXW5 612 aaPredicted RBP18.41■□□□□ 0.54
SUMO1-207ENST00000409498 VGLL2Q8N8G2 317 aa18.41■□□□□ 0.54
SUMO1-207ENST00000409498 C1orf115Q9H7X2 142 aa18.41■□□□□ 0.54
SUMO1-207ENST00000409498 IRS2Q9Y4H2 1338 aa18.41■□□□□ 0.54
SUMO1-207ENST00000409498 MED23Q9ULK4 1368 aa18.41■□□□□ 0.54
SUMO1-207ENST00000409498 C6orf229H3BNL8 230 aa18.4■□□□□ 0.54
SUMO1-207ENST00000409498 PPIP5K2O43314 1243 aa18.4■□□□□ 0.54
SUMO1-207ENST00000409498 AOC3Q16853 763 aa18.4■□□□□ 0.54
SUMO1-207ENST00000409498 LARGE2Q8N3Y3 721 aa18.4■□□□□ 0.54
SUMO1-207ENST00000409498 SUPT16HQ9Y5B9 1047 aaKnown RBP18.4■□□□□ 0.54
SUMO1-207ENST00000409498 ZNF804BA4D1E1 1349 aa18.4■□□□□ 0.54
SUMO1-207ENST00000409498 YY1P25490 414 aa18.39■□□□□ 0.53
SUMO1-207ENST00000409498 IL15P40933 162 aaPredicted RBP18.39■□□□□ 0.53
SUMO1-207ENST00000409498 UBE4AQ14139 1066 aa18.39■□□□□ 0.53
SUMO1-207ENST00000409498 JDP2Q8WYK2 163 aa18.39■□□□□ 0.53
SUMO1-207ENST00000409498 ZC3H12CQ9C0D7 883 aaKnown RBP18.39■□□□□ 0.53
SUMO1-207ENST00000409498 WTIPA6NIX2 430 aaPredicted RBP18.38■□□□□ 0.53
SUMO1-207ENST00000409498 TAF5LO75529 589 aa18.38■□□□□ 0.53
SUMO1-207ENST00000409498 PDE8BO95263 885 aa18.38■□□□□ 0.53
SUMO1-207ENST00000409498 PA2G4Q9UQ80 394 aaKnown RBP18.38■□□□□ 0.53
SUMO1-207ENST00000409498 NOP58Q9Y2X3 529 aaKnown RBP18.38■□□□□ 0.53
SUMO1-207ENST00000409498 KCNA4P22459 653 aa18.37■□□□□ 0.53
SUMO1-207ENST00000409498 AAMPQ13685 434 aa18.37■□□□□ 0.53
SUMO1-207ENST00000409498 NIM1KQ8IY84 436 aa18.37■□□□□ 0.53
SUMO1-207ENST00000409498 HELBQ8NG08 1087 aaPredicted RBP18.37■□□□□ 0.53
SUMO1-207ENST00000409498 ZNRF3Q9ULT6 936 aa18.37■□□□□ 0.53
SUMO1-207ENST00000409498 GLTPD2A6NH11 291 aa18.36■□□□□ 0.53
SUMO1-207ENST00000409498 FGFR2P21802 821 aa18.36■□□□□ 0.53
SUMO1-207ENST00000409498 METTL24Q5JXM2 366 aa18.36■□□□□ 0.53
SUMO1-207ENST00000409498 SIRT2Q8IXJ6 389 aa18.36■□□□□ 0.53
SUMO1-207ENST00000409498 GPR101Q96P66 508 aaPredicted RBP18.36■□□□□ 0.53
SUMO1-207ENST00000409498 RIMBP2O15034 1052 aa18.35■□□□□ 0.53
SUMO1-207ENST00000409498 PODNQ7Z5L7 613 aa18.35■□□□□ 0.53
SUMO1-207ENST00000409498 CRBNQ96SW2 442 aa18.35■□□□□ 0.53
SUMO1-207ENST00000409498 YDJCA8MPS7 323 aa18.34■□□□□ 0.53
SUMO1-207ENST00000409498 SNAP23O00161 211 aa18.34■□□□□ 0.53
SUMO1-207ENST00000409498 KCNJ4P48050 445 aa18.34■□□□□ 0.53
SUMO1-207ENST00000409498 DPY19L2Q6NUT2 758 aa18.34■□□□□ 0.53
SUMO1-207ENST00000409498 TXNRD3Q86VQ6 643 aa18.34■□□□□ 0.53
SUMO1-207ENST00000409498 COA1Q9GZY4 146 aa18.34■□□□□ 0.53
SUMO1-207ENST00000409498 SIL1Q9H173 461 aa18.34■□□□□ 0.53
SUMO1-207ENST00000409498 CEP126Q9P2H0 1117 aa18.34■□□□□ 0.53
SUMO1-207ENST00000409498 ZBTB22O15209 634 aa18.33■□□□□ 0.52
SUMO1-207ENST00000409498 HMMRO75330 724 aa18.33■□□□□ 0.52
SUMO1-207ENST00000409498 EIF6P56537 245 aaKnown RBP18.33■□□□□ 0.52
SUMO1-207ENST00000409498 G3BP1Q13283 466 aaKnown RBP eCLIP18.33■□□□□ 0.52
SUMO1-207ENST00000409498 PUM3Q15397 648 aaKnown RBP18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms