RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 PLA2G4DQ86XP0 818 aa12.55□□□□□ -0.4
NIF3L1-204ENST00000409357 MRPL50Q8N5N7 158 aaKnown RBP12.55□□□□□ -0.4
NIF3L1-204ENST00000409357 SGIP1Q9BQI5 828 aa12.55□□□□□ -0.4
NIF3L1-204ENST00000409357 API5Q9BZZ5 524 aaKnown RBP12.55□□□□□ -0.4
NIF3L1-204ENST00000409357 L2HGDHQ9H9P8 463 aa12.55□□□□□ -0.4
NIF3L1-204ENST00000409357 TFCP2L1Q9NZI6 479 aa12.55□□□□□ -0.4
NIF3L1-204ENST00000409357 PTPRCP08575 1304 aa12.55□□□□□ -0.4
NIF3L1-204ENST00000409357 SLU7O95391 586 aaKnown RBP12.54□□□□□ -0.4
NIF3L1-204ENST00000409357 CASQ1P31415 396 aa12.54□□□□□ -0.4
NIF3L1-204ENST00000409357 TNNT3P45378 269 aaPredicted RBP12.54□□□□□ -0.4
NIF3L1-204ENST00000409357 NEK4P51957 841 aa12.54□□□□□ -0.4
NIF3L1-204ENST00000409357 DHX8Q14562 1220 aaKnown RBP12.54□□□□□ -0.4
NIF3L1-204ENST00000409357 AMOTQ4VCS5 1084 aa12.54□□□□□ -0.4
NIF3L1-204ENST00000409357 ICE2Q659A1 982 aa12.54□□□□□ -0.4
NIF3L1-204ENST00000409357 FBXO38Q6PIJ6 1188 aa12.54□□□□□ -0.4
NIF3L1-204ENST00000409357 DCAF5Q96JK2 942 aa12.54□□□□□ -0.4
NIF3L1-204ENST00000409357 NCAPGQ9BPX3 1015 aa12.54□□□□□ -0.4
NIF3L1-204ENST00000409357 ATG3Q9NT62 314 aa12.54□□□□□ -0.4
NIF3L1-204ENST00000409357 COL5A3P25940 1745 aaPredicted RBP12.54□□□□□ -0.4
NIF3L1-204ENST00000409357 ADAMTS7Q9UKP4 1686 aa12.54□□□□□ -0.4
NIF3L1-204ENST00000409357 DHX16O60231 1041 aaKnown RBP12.54□□□□□ -0.4
NIF3L1-204ENST00000409357 ITPK1Q13572 414 aa12.54□□□□□ -0.4
NIF3L1-204ENST00000409357 SLC4A9Q96Q91 983 aa12.54□□□□□ -0.4
NIF3L1-204ENST00000409357 MTFR1LQ9H019 292 aa12.54□□□□□ -0.4
NIF3L1-204ENST00000409357 LOC102724428A0A0B4J2F2 783 aa12.53□□□□□ -0.4
NIF3L1-204ENST00000409357 SPDYE2BA6NHP3 402 aa12.53□□□□□ -0.4
NIF3L1-204ENST00000409357 U2SURPO15042 1029 aaKnown RBP12.53□□□□□ -0.4
NIF3L1-204ENST00000409357 RGL2O15211 777 aa12.53□□□□□ -0.4
NIF3L1-204ENST00000409357 SPDYE6P0CI01 402 aa12.53□□□□□ -0.4
NIF3L1-204ENST00000409357 U2AF1L5P0DN76 240 aaPredicted RBP12.53□□□□□ -0.4
NIF3L1-204ENST00000409357 ZSCAN22P10073 491 aaPredicted RBP12.53□□□□□ -0.4
NIF3L1-204ENST00000409357 PTGS1P23219 599 aa12.53□□□□□ -0.4
NIF3L1-204ENST00000409357 GUCY2CP25092 1073 aa12.53□□□□□ -0.4
NIF3L1-204ENST00000409357 KCNJ6P48051 423 aa12.53□□□□□ -0.4
NIF3L1-204ENST00000409357 SIK1P57059 783 aa12.53□□□□□ -0.4
NIF3L1-204ENST00000409357 U2AF1Q01081 240 aaKnown RBP eCLIP12.53□□□□□ -0.4
NIF3L1-204ENST00000409357 SPDYE2Q495Y8 402 aa12.53□□□□□ -0.4
NIF3L1-204ENST00000409357 RBM43Q6ZSC3 357 aaKnown RBP12.53□□□□□ -0.4
NIF3L1-204ENST00000409357 ANKRD44Q8N8A2 993 aa12.53□□□□□ -0.4
NIF3L1-204ENST00000409357 LINC00116Q8NCU8 138 aa12.53□□□□□ -0.4
NIF3L1-204ENST00000409357 TDRD7Q8NHU6 1098 aaKnown RBP12.53□□□□□ -0.4
NIF3L1-204ENST00000409357 MYCBPQ99417 103 aaPredicted RBP12.53□□□□□ -0.4
NIF3L1-204ENST00000409357 PPP1R1BQ9UD71 204 aaPredicted RBP12.53□□□□□ -0.4
NIF3L1-204ENST00000409357 FHOD1Q9Y613 1164 aa12.53□□□□□ -0.4
NIF3L1-204ENST00000409357 ZRANB2O95218 330 aaKnown RBP eCLIP12.52□□□□□ -0.4
NIF3L1-204ENST00000409357 MTHFSDQ2M296 383 aaKnown RBP12.52□□□□□ -0.4
NIF3L1-204ENST00000409357 C1orf141Q5JVX7 400 aa12.52□□□□□ -0.4
NIF3L1-204ENST00000409357 SARM1Q6SZW1 724 aa12.52□□□□□ -0.4
NIF3L1-204ENST00000409357 CCDC186Q7Z3E2 898 aa12.52□□□□□ -0.4
NIF3L1-204ENST00000409357 COL23A1Q86Y22 540 aaPredicted RBP12.52□□□□□ -0.4
NIF3L1-204ENST00000409357 GOLGA6L1Q8N7Z2 621 aa12.52□□□□□ -0.4
NIF3L1-204ENST00000409357 SMARCC1Q92922 1105 aaPredicted RBP12.52□□□□□ -0.4
NIF3L1-204ENST00000409357 LGR6Q9HBX8 967 aa12.52□□□□□ -0.4
NIF3L1-204ENST00000409357 IFT57Q9NWB7 429 aa12.52□□□□□ -0.4
NIF3L1-204ENST00000409357 BCCIPQ9P287 314 aaKnown RBP eCLIP12.52□□□□□ -0.4
NIF3L1-204ENST00000409357 MYH14Q7Z406 1995 aaKnown RBP12.52□□□□□ -0.41
NIF3L1-204ENST00000409357 TCHHQ07283 1943 aa12.52□□□□□ -0.41
NIF3L1-204ENST00000409357 MRC1P22897 1456 aa12.51□□□□□ -0.41
NIF3L1-204ENST00000409357 ERVV-2B6SEH9 535 aa12.51□□□□□ -0.41
NIF3L1-204ENST00000409357 TPM1P09493 284 aa12.51□□□□□ -0.41
NIF3L1-204ENST00000409357 ZNF75DP51815 510 aa12.51□□□□□ -0.41
NIF3L1-204ENST00000409357 TPD52L1Q16890 204 aaPredicted RBP12.51□□□□□ -0.41
NIF3L1-204ENST00000409357 C16orf45Q96MC5 204 aaPredicted RBP12.51□□□□□ -0.41
NIF3L1-204ENST00000409357 SRCIN1Q9C0H9 1055 aa12.51□□□□□ -0.41
NIF3L1-204ENST00000409357 ZNF446Q9NWS9 450 aa12.51□□□□□ -0.41
NIF3L1-204ENST00000409357 RSPH14Q9UHP6 348 aa12.51□□□□□ -0.41
NIF3L1-204ENST00000409357 ZNF215Q9UL58 517 aaPredicted RBP12.51□□□□□ -0.41
NIF3L1-204ENST00000409357 TJP1Q07157 1748 aa12.51□□□□□ -0.41
NIF3L1-204ENST00000409357 ZNF831Q5JPB2 1677 aa12.51□□□□□ -0.41
NIF3L1-204ENST00000409357 ERICH4A6NGS2 130 aa12.51□□□□□ -0.41
NIF3L1-204ENST00000409357 PTPN14Q15678 1187 aa12.51□□□□□ -0.41
NIF3L1-204ENST00000409357 NFATC2IPQ8NCF5 419 aa12.51□□□□□ -0.41
NIF3L1-204ENST00000409357 GOLGA5Q8TBA6 731 aa12.51□□□□□ -0.41
NIF3L1-204ENST00000409357 SMARCA5O60264 1052 aaPredicted RBP12.5□□□□□ -0.41
NIF3L1-204ENST00000409357 VAMP4O75379 141 aa12.5□□□□□ -0.41
NIF3L1-204ENST00000409357 GTF2A1P52655 376 aaPredicted RBP12.5□□□□□ -0.41
NIF3L1-204ENST00000409357 CABP4P57796 275 aa12.5□□□□□ -0.41
NIF3L1-204ENST00000409357 NOM1Q5C9Z4 860 aaKnown RBP12.5□□□□□ -0.41
NIF3L1-204ENST00000409357 AKAP4Q5JQC9 854 aa12.5□□□□□ -0.41
NIF3L1-204ENST00000409357 FILIP1Q7Z7B0 1213 aa12.5□□□□□ -0.41
NIF3L1-204ENST00000409357 MRFAP1L1Q96HT8 127 aa12.5□□□□□ -0.41
NIF3L1-204ENST00000409357 CHAMP1Q96JM3 812 aa12.5□□□□□ -0.41
NIF3L1-204ENST00000409357 ARGLU1Q9NWB6 273 aaPredicted RBP12.5□□□□□ -0.41
NIF3L1-204ENST00000409357 SIPA1L3O60292 1781 aaPredicted RBP12.49□□□□□ -0.41
NIF3L1-204ENST00000409357 MYO1CO00159 1063 aa12.49□□□□□ -0.41
NIF3L1-204ENST00000409357 RPS6KA5O75582 802 aa12.49□□□□□ -0.41
NIF3L1-204ENST00000409357 PNMA6AP0CW24 399 aaPredicted RBP12.49□□□□□ -0.41
NIF3L1-204ENST00000409357 ATP6V1AP38606 617 aa12.49□□□□□ -0.41
NIF3L1-204ENST00000409357 PLA2G4AP47712 749 aa12.49□□□□□ -0.41
NIF3L1-204ENST00000409357 CCDC93Q567U6 631 aa12.49□□□□□ -0.41
NIF3L1-204ENST00000409357 MSL1Q68DK7 614 aa12.49□□□□□ -0.41
NIF3L1-204ENST00000409357 RPAINQ86UA6 219 aa12.49□□□□□ -0.41
NIF3L1-204ENST00000409357 POTEDQ86YR6 584 aa12.49□□□□□ -0.41
NIF3L1-204ENST00000409357 MPNDQ8N594 471 aa12.49□□□□□ -0.41
NIF3L1-204ENST00000409357 MSL3Q8N5Y2 521 aaKnown RBP12.49□□□□□ -0.41
NIF3L1-204ENST00000409357 FBXO18Q8NFZ0 1043 aa12.49□□□□□ -0.41
NIF3L1-204ENST00000409357 PHACTR3Q96KR7 559 aa12.49□□□□□ -0.41
NIF3L1-204ENST00000409357 ATP10DQ9P241 1426 aa12.49□□□□□ -0.41
NIF3L1-204ENST00000409357 F13A1P00488 732 aa12.48□□□□□ -0.41
NIF3L1-204ENST00000409357 MAP3K11Q16584 847 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms