RNA–Protein interactions for RNA: ENST00000409285.6

VSX1-203, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best)

Gene VSX1, Length 1,486 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-203ENST00000409285 IL15P40933 162 aaPredicted RBP25.36■■□□□ 1.65
VSX1-203ENST00000409285 CENPQQ7L2Z9 268 aaPredicted RBP25.36■■□□□ 1.65
VSX1-203ENST00000409285 ERC1Q8IUD2 1116 aa25.36■■□□□ 1.65
VSX1-203ENST00000409285 EXOC6BQ9Y2D4 811 aa25.36■■□□□ 1.65
VSX1-203ENST00000409285 FER1L6Q2WGJ9 1857 aa25.36■■□□□ 1.65
VSX1-203ENST00000409285 SIL1Q9H173 461 aa25.35■■□□□ 1.65
VSX1-203ENST00000409285 MROH5Q6ZUA9 1318 aa25.35■■□□□ 1.65
VSX1-203ENST00000409285 G3BP1Q13283 466 aaKnown RBP eCLIP25.34■■□□□ 1.65
VSX1-203ENST00000409285 B4GALNT3Q6L9W6 998 aa25.34■■□□□ 1.65
VSX1-203ENST00000409285 ZNF622Q969S3 477 aaKnown RBP eCLIP25.34■■□□□ 1.65
VSX1-203ENST00000409285 CNNM1Q9NRU3 951 aa25.34■■□□□ 1.65
VSX1-203ENST00000409285 A0A0G2JLW4 131 aa25.34■■□□□ 1.65
VSX1-203ENST00000409285 PPEF1O14829 653 aaPredicted RBP25.34■■□□□ 1.65
VSX1-203ENST00000409285 LRRC24Q50LG9 513 aa25.34■■□□□ 1.65
VSX1-203ENST00000409285 PRPF40BQ6NWY9 871 aaKnown RBP25.34■■□□□ 1.65
VSX1-203ENST00000409285 PUS3Q9BZE2 481 aaKnown RBP25.34■■□□□ 1.65
VSX1-203ENST00000409285 TTLL6Q8N841 843 aa25.33■■□□□ 1.65
VSX1-203ENST00000409285 NLGN2Q8NFZ4 835 aa25.33■■□□□ 1.65
VSX1-203ENST00000409285 VGLL2Q8N8G2 317 aa25.32■■□□□ 1.64
VSX1-203ENST00000409285 KIF1BPQ96EK5 621 aa25.32■■□□□ 1.64
VSX1-203ENST00000409285 PIM2Q9P1W9 311 aa25.32■■□□□ 1.64
VSX1-203ENST00000409285 ATP6V0A2Q9Y487 856 aa25.32■■□□□ 1.64
VSX1-203ENST00000409285 SNED1Q8TER0 1413 aa25.31■■□□□ 1.64
VSX1-203ENST00000409285 DUOX1Q9NRD9 1551 aa25.31■■□□□ 1.64
VSX1-203ENST00000409285 SASH1O94885 1247 aa25.31■■□□□ 1.64
VSX1-203ENST00000409285 OS9Q13438 667 aaPredicted RBP25.31■■□□□ 1.64
VSX1-203ENST00000409285 SP8Q8IXZ3 490 aa25.31■■□□□ 1.64
VSX1-203ENST00000409285 MINPP1Q9UNW1 487 aa25.31■■□□□ 1.64
VSX1-203ENST00000409285 CHRNDQ07001 517 aa25.29■■□□□ 1.64
VSX1-203ENST00000409285 RHPN1Q8TCX5 695 aa25.29■■□□□ 1.64
VSX1-203ENST00000409285 C7orf43Q8WVR3 580 aa25.29■■□□□ 1.64
VSX1-203ENST00000409285 LRRCC1Q9C099 1032 aa25.29■■□□□ 1.64
VSX1-203ENST00000409285 MYH13Q9UKX3 1938 aa25.29■■□□□ 1.64
VSX1-203ENST00000409285 ANKRD2Q9GZV1 360 aa25.28■■□□□ 1.64
VSX1-203ENST00000409285 GPR108Q9NPR9 543 aa25.28■■□□□ 1.64
VSX1-203ENST00000409285 ZNF609O15014 1411 aa25.28■■□□□ 1.64
VSX1-203ENST00000409285 PDE8BO95263 885 aa25.28■■□□□ 1.64
VSX1-203ENST00000409285 METTL24Q5JXM2 366 aa25.28■■□□□ 1.64
VSX1-203ENST00000409285 CC2D2BQ6DHV5 1058 aa25.28■■□□□ 1.64
VSX1-203ENST00000409285 CEP126Q9P2H0 1117 aa25.28■■□□□ 1.64
VSX1-203ENST00000409285 NUCB1Q02818 461 aa25.27■■□□□ 1.64
VSX1-203ENST00000409285 GRIPAP1Q4V328 841 aa25.27■■□□□ 1.64
VSX1-203ENST00000409285 DALRD3Q5D0E6 543 aaKnown RBP25.27■■□□□ 1.64
VSX1-203ENST00000409285 PODXL2Q9NZ53 605 aa25.27■■□□□ 1.64
VSX1-203ENST00000409285 XDHP47989 1333 aa25.26■■□□□ 1.63
VSX1-203ENST00000409285 TFCP2Q12800 502 aa25.26■■□□□ 1.63
VSX1-203ENST00000409285 DCAF8L1A6NGE4 600 aa25.25■■□□□ 1.63
VSX1-203ENST00000409285 UTRNP46939 3433 aa25.24■■□□□ 1.63
VSX1-203ENST00000409285 SOGA3Q5TF21 947 aa25.24■■□□□ 1.63
VSX1-203ENST00000409285 TMX4Q9H1E5 349 aaPredicted RBP25.24■■□□□ 1.63
VSX1-203ENST00000409285 AKAP2Q9Y2D5 859 aa25.24■■□□□ 1.63
VSX1-203ENST00000409285 PUM3Q15397 648 aaKnown RBP25.23■■□□□ 1.63
VSX1-203ENST00000409285 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.23■■□□□ 1.63
VSX1-203ENST00000409285 CCDC88AQ3V6T2 1871 aa25.23■■□□□ 1.63
VSX1-203ENST00000409285 FGFR2P21802 821 aa25.22■■□□□ 1.63
VSX1-203ENST00000409285 ANKRD45Q5TZF3 282 aa25.22■■□□□ 1.63
VSX1-203ENST00000409285 CHD1LQ86WJ1 897 aa25.22■■□□□ 1.63
VSX1-203ENST00000409285 CLASRPQ8N2M8 674 aaKnown RBP25.22■■□□□ 1.63
VSX1-203ENST00000409285 APBB1O00213 710 aa25.21■■□□□ 1.63
VSX1-203ENST00000409285 UBE4AQ14139 1066 aa25.21■■□□□ 1.63
VSX1-203ENST00000409285 TNNI3KQ59H18 835 aa25.21■■□□□ 1.63
VSX1-203ENST00000409285 LEMD3Q9Y2U8 911 aa25.21■■□□□ 1.63
VSX1-203ENST00000409285 FPGT-TNNI3KV9GXZ4 949 aa25.21■■□□□ 1.63
VSX1-203ENST00000409285 DICER1Q9UPY3 1922 aaKnown RBP25.21■■□□□ 1.63
VSX1-203ENST00000409285 GPSM2P81274 684 aa25.21■■□□□ 1.63
VSX1-203ENST00000409285 SLC51AQ86UW1 340 aa25.21■■□□□ 1.63
VSX1-203ENST00000409285 IL1RAPL2Q9NP60 686 aa25.21■■□□□ 1.63
VSX1-203ENST00000409285 ANKIB1Q9P2G1 1089 aa25.21■■□□□ 1.63
VSX1-203ENST00000409285 ZBTB47Q9UFB7 747 aaPredicted RBP25.21■■□□□ 1.63
VSX1-203ENST00000409285 SBF1O95248 1867 aa25.2■■□□□ 1.62
VSX1-203ENST00000409285 TAF5LO75529 589 aa25.2■■□□□ 1.62
VSX1-203ENST00000409285 ATP2B3Q16720 1220 aa25.2■■□□□ 1.62
VSX1-203ENST00000409285 CCDC93Q567U6 631 aa25.2■■□□□ 1.62
VSX1-203ENST00000409285 HELBQ8NG08 1087 aaPredicted RBP25.2■■□□□ 1.62
VSX1-203ENST00000409285 LPIN2Q92539 896 aa25.2■■□□□ 1.62
VSX1-203ENST00000409285 AKAP11Q9UKA4 1901 aa25.2■■□□□ 1.62
VSX1-203ENST00000409285 CHD4Q14839 1912 aa25.19■■□□□ 1.62
VSX1-203ENST00000409285 A0A1B0GUL7 405 aa25.19■■□□□ 1.62
VSX1-203ENST00000409285 C21orf2O43822 256 aa25.19■■□□□ 1.62
VSX1-203ENST00000409285 SMARCA5O60264 1052 aaPredicted RBP25.19■■□□□ 1.62
VSX1-203ENST00000409285 ATP2B4P23634 1241 aa25.19■■□□□ 1.62
VSX1-203ENST00000409285 PELP1Q8IZL8 1130 aaKnown RBP25.19■■□□□ 1.62
VSX1-203ENST00000409285 EAF2Q96CJ1 260 aaPredicted RBP25.19■■□□□ 1.62
VSX1-203ENST00000409285 RTFDC1Q9BY42 306 aaPredicted RBP25.19■■□□□ 1.62
VSX1-203ENST00000409285 NSFL1CQ9UNZ2 370 aaKnown RBP25.19■■□□□ 1.62
VSX1-203ENST00000409285 PSME4Q14997 1843 aa25.19■■□□□ 1.62
VSX1-203ENST00000409285 ZNF804BA4D1E1 1349 aa25.19■■□□□ 1.62
VSX1-203ENST00000409285 GPR162Q16538 588 aa25.18■■□□□ 1.62
VSX1-203ENST00000409285 OLFM4Q6UX06 510 aa25.18■■□□□ 1.62
VSX1-203ENST00000409285 RTKN2Q8IZC4 609 aa25.18■■□□□ 1.62
VSX1-203ENST00000409285 MPNDQ8N594 471 aa25.18■■□□□ 1.62
VSX1-203ENST00000409285 GGA1Q9UJY5 639 aa25.18■■□□□ 1.62
VSX1-203ENST00000409285 IRS2Q9Y4H2 1338 aa25.18■■□□□ 1.62
VSX1-203ENST00000409285 DPP8Q6V1X1 898 aaPredicted RBP25.17■■□□□ 1.62
VSX1-203ENST00000409285 C15orf52Q6ZUT6 534 aaKnown RBP25.17■■□□□ 1.62
VSX1-203ENST00000409285 TBC1D16Q8TBP0 767 aa25.17■■□□□ 1.62
VSX1-203ENST00000409285 LNPKQ9C0E8 428 aa25.17■■□□□ 1.62
VSX1-203ENST00000409285 SALL3Q9BXA9 1300 aa25.17■■□□□ 1.62
VSX1-203ENST00000409285 MED23Q9ULK4 1368 aa25.17■■□□□ 1.62
VSX1-203ENST00000409285 SLC5A1P13866 664 aa25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms