RNA–Protein interactions for RNA: ENST00000409229.7

SLC3A1-202, Transcript of solute carrier family 3 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC3A1, Length 2,909 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A1-202ENST00000409229 BORCS6Q96GS4 357 aa13.43□□□□□ -0.26
SLC3A1-202ENST00000409229 MPHOSPH8Q99549 860 aa13.43□□□□□ -0.26
SLC3A1-202ENST00000409229 MCM8Q9UJA3 840 aa13.43□□□□□ -0.26
SLC3A1-202ENST00000409229 MYOM2P54296 1465 aa13.43□□□□□ -0.26
SLC3A1-202ENST00000409229 CASP8Q14790 479 aa13.43□□□□□ -0.26
SLC3A1-202ENST00000409229 KIRREL3Q8IZU9 778 aa13.43□□□□□ -0.26
SLC3A1-202ENST00000409229 ANO10Q9NW15 660 aa13.43□□□□□ -0.26
SLC3A1-202ENST00000409229 HYPKQ9NX55 129 aa13.43□□□□□ -0.26
SLC3A1-202ENST00000409229 KNDC1Q76NI1 1749 aa13.43□□□□□ -0.26
SLC3A1-202ENST00000409229 ATP10DQ9P241 1426 aa13.42□□□□□ -0.26
SLC3A1-202ENST00000409229 FANCD2Q9BXW9 1451 aa13.42□□□□□ -0.26
SLC3A1-202ENST00000409229 RNF40O75150 1001 aa13.42□□□□□ -0.26
SLC3A1-202ENST00000409229 PDE6BP35913 854 aa13.42□□□□□ -0.26
SLC3A1-202ENST00000409229 CCNHP51946 323 aaPredicted RBP13.42□□□□□ -0.26
SLC3A1-202ENST00000409229 C8orf58Q8NAV2 365 aa13.42□□□□□ -0.26
SLC3A1-202ENST00000409229 ZKSCAN4Q969J2 545 aaPredicted RBP13.42□□□□□ -0.26
SLC3A1-202ENST00000409229 PNKPQ96T60 521 aa13.42□□□□□ -0.26
SLC3A1-202ENST00000409229 L1RE1Q9UN81 338 aa13.42□□□□□ -0.26
SLC3A1-202ENST00000409229 SKAP2O75563 359 aaPredicted RBP13.42□□□□□ -0.26
SLC3A1-202ENST00000409229 RHOXF2BP0C7M4 288 aa13.42□□□□□ -0.26
SLC3A1-202ENST00000409229 CHMP4BP1P59074 171 aa13.42□□□□□ -0.26
SLC3A1-202ENST00000409229 TBC1D8BQ0IIM8 1120 aa13.42□□□□□ -0.26
SLC3A1-202ENST00000409229 RHOXF2Q9BQY4 288 aa13.42□□□□□ -0.26
SLC3A1-202ENST00000409229 IRAK4Q9NWZ3 460 aa13.42□□□□□ -0.26
SLC3A1-202ENST00000409229 HMMRO75330 724 aa13.41□□□□□ -0.26
SLC3A1-202ENST00000409229 WDHD1O75717 1129 aaPredicted RBP13.41□□□□□ -0.26
SLC3A1-202ENST00000409229 KCNJ6P48051 423 aa13.41□□□□□ -0.26
SLC3A1-202ENST00000409229 PTPN21Q16825 1174 aa13.41□□□□□ -0.26
SLC3A1-202ENST00000409229 AP1ARQ63HQ0 302 aa13.41□□□□□ -0.26
SLC3A1-202ENST00000409229 TACO1Q9BSH4 297 aaKnown RBP13.41□□□□□ -0.26
SLC3A1-202ENST00000409229 YTHDC2Q9H6S0 1430 aaKnown RBP13.41□□□□□ -0.26
SLC3A1-202ENST00000409229 TOPBP1Q92547 1522 aa13.41□□□□□ -0.26
SLC3A1-202ENST00000409229 VWA3AA6NCI4 1184 aa13.41□□□□□ -0.26
SLC3A1-202ENST00000409229 ERCC3P19447 782 aa13.41□□□□□ -0.26
SLC3A1-202ENST00000409229 RBM5P52756 815 aaKnown RBP eCLIP13.41□□□□□ -0.26
SLC3A1-202ENST00000409229 ME3Q16798 604 aa13.41□□□□□ -0.26
SLC3A1-202ENST00000409229 POTEDQ86YR6 584 aa13.41□□□□□ -0.26
SLC3A1-202ENST00000409229 CENPHQ9H3R5 247 aa13.41□□□□□ -0.26
SLC3A1-202ENST00000409229 ST3GAL1Q11201 340 aa13.4□□□□□ -0.26
SLC3A1-202ENST00000409229 JAKMIP1Q96N16 626 aaKnown RBP13.4□□□□□ -0.26
SLC3A1-202ENST00000409229 ANKZF1Q9H8Y5 726 aa13.4□□□□□ -0.26
SLC3A1-202ENST00000409229 SHANK2Q9UPX8 1470 aa13.4□□□□□ -0.26
SLC3A1-202ENST00000409229 SSH2Q76I76 1423 aa13.4□□□□□ -0.26
SLC3A1-202ENST00000409229 TRAPPC8Q9Y2L5 1435 aa13.4□□□□□ -0.26
SLC3A1-202ENST00000409229 ZSCAN12O43309 604 aa13.4□□□□□ -0.26
SLC3A1-202ENST00000409229 CAND2O75155 1236 aa13.4□□□□□ -0.26
SLC3A1-202ENST00000409229 PSME1Q06323 249 aa13.4□□□□□ -0.26
SLC3A1-202ENST00000409229 ACTN3Q08043 901 aaPredicted RBP13.4□□□□□ -0.26
SLC3A1-202ENST00000409229 NBPF5PQ86XG9 351 aaPredicted RBP13.4□□□□□ -0.26
SLC3A1-202ENST00000409229 CCDC12Q8WUD4 166 aaPredicted RBP13.4□□□□□ -0.26
SLC3A1-202ENST00000409229 SMARCC1Q92922 1105 aaPredicted RBP13.4□□□□□ -0.26
SLC3A1-202ENST00000409229 NAT10Q9H0A0 1025 aaKnown RBP13.4□□□□□ -0.26
SLC3A1-202ENST00000409229 A1CFQ9NQ94 594 aaKnown RBP13.4□□□□□ -0.26
SLC3A1-202ENST00000409229 MBIPQ9NS73 344 aa13.4□□□□□ -0.26
SLC3A1-202ENST00000409229 TERF2IPQ9NYB0 399 aa13.4□□□□□ -0.26
SLC3A1-202ENST00000409229 SPG7Q9UQ90 795 aa13.4□□□□□ -0.26
SLC3A1-202ENST00000409229 PTPRTO14522 1441 aa13.4□□□□□ -0.26
SLC3A1-202ENST00000409229 CLNS1AP54105 237 aaKnown RBP13.4□□□□□ -0.27
SLC3A1-202ENST00000409229 ZKSCAN8Q15776 578 aaPredicted RBP13.4□□□□□ -0.27
SLC3A1-202ENST00000409229 HNRNPLLQ8WVV9 542 aaKnown RBP13.4□□□□□ -0.27
SLC3A1-202ENST00000409229 ARHGEF40Q8TER5 1519 aa13.39□□□□□ -0.27
SLC3A1-202ENST00000409229 CHUKO15111 745 aa13.39□□□□□ -0.27
SLC3A1-202ENST00000409229 ARID4AP29374 1257 aaPredicted RBP13.39□□□□□ -0.27
SLC3A1-202ENST00000409229 LARP1Q6PKG0 1096 aaKnown RBP13.39□□□□□ -0.27
SLC3A1-202ENST00000409229 IQCA1Q86XH1 822 aa13.39□□□□□ -0.27
SLC3A1-202ENST00000409229 CEP57Q86XR8 500 aa13.39□□□□□ -0.27
SLC3A1-202ENST00000409229 IL17RAQ96F46 866 aa13.39□□□□□ -0.27
SLC3A1-202ENST00000409229 EHD4Q9H223 541 aa13.39□□□□□ -0.27
SLC3A1-202ENST00000409229 PPP2R2CQ9Y2T4 447 aa13.39□□□□□ -0.27
SLC3A1-202ENST00000409229 SAMM50Q9Y512 469 aa13.39□□□□□ -0.27
SLC3A1-202ENST00000409229 EME2A4GXA9 379 aaPredicted RBP13.39□□□□□ -0.27
SLC3A1-202ENST00000409229 CCAR1Q8IX12 1150 aaKnown RBP13.39□□□□□ -0.27
SLC3A1-202ENST00000409229 MADDQ8WXG6 1647 aa13.38□□□□□ -0.27
SLC3A1-202ENST00000409229 LRRIQ3A6PVS8 624 aaPredicted RBP13.38□□□□□ -0.27
SLC3A1-202ENST00000409229 KINO60870 393 aaKnown RBP13.38□□□□□ -0.27
SLC3A1-202ENST00000409229 GCKP35557 465 aa13.38□□□□□ -0.27
SLC3A1-202ENST00000409229 KARSQ15046 597 aaKnown RBP13.38□□□□□ -0.27
SLC3A1-202ENST00000409229 ITFG2Q969R8 447 aa13.38□□□□□ -0.27
SLC3A1-202ENST00000409229 SH2B1Q9NRF2 756 aaPredicted RBP13.38□□□□□ -0.27
SLC3A1-202ENST00000409229 CPSF2Q9P2I0 782 aaKnown RBP13.38□□□□□ -0.27
SLC3A1-202ENST00000409229 PDS5BQ9NTI5 1447 aa13.38□□□□□ -0.27
SLC3A1-202ENST00000409229 DNMBPQ6XZF7 1577 aa13.38□□□□□ -0.27
SLC3A1-202ENST00000409229 PDCP20941 246 aa13.38□□□□□ -0.27
SLC3A1-202ENST00000409229 PRKAR2BP31323 418 aa13.38□□□□□ -0.27
SLC3A1-202ENST00000409229 VSNL1P62760 191 aa13.38□□□□□ -0.27
SLC3A1-202ENST00000409229 ADCK5Q3MIX3 580 aa13.38□□□□□ -0.27
SLC3A1-202ENST00000409229 BCAS4Q8TDM0 211 aa13.38□□□□□ -0.27
SLC3A1-202ENST00000409229 RIN2Q8WYP3 895 aaPredicted RBP13.38□□□□□ -0.27
SLC3A1-202ENST00000409229 ZSCAN31Q96LW9 406 aaPredicted RBP13.38□□□□□ -0.27
SLC3A1-202ENST00000409229 LRRCC1Q9C099 1032 aa13.38□□□□□ -0.27
SLC3A1-202ENST00000409229 IQGAP2Q13576 1575 aa13.38□□□□□ -0.27
SLC3A1-202ENST00000409229 LMOD1P29536 600 aaPredicted RBP13.37□□□□□ -0.27
SLC3A1-202ENST00000409229 PEX19P40855 299 aa13.37□□□□□ -0.27
SLC3A1-202ENST00000409229 CCDC73Q6ZRK6 1079 aa13.37□□□□□ -0.27
SLC3A1-202ENST00000409229 ZNF483Q8TF39 744 aaPredicted RBP13.37□□□□□ -0.27
SLC3A1-202ENST00000409229 THOC1Q96FV9 657 aaKnown RBP13.37□□□□□ -0.27
SLC3A1-202ENST00000409229 PUS7Q96PZ0 661 aaKnown RBP13.37□□□□□ -0.27
SLC3A1-202ENST00000409229 GGNBP2Q9H3C7 697 aa13.37□□□□□ -0.27
SLC3A1-202ENST00000409229 ETAA1Q9NY74 926 aa13.37□□□□□ -0.27
SLC3A1-202ENST00000409229 CTAGE5O15320 804 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms