RNA–Protein interactions for RNA: ENST00000409096.5

CUL3-203, Transcript of cullin 3, humanhuman

TSL 1 (best) BASIC

Gene CUL3, Length 2,701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-203ENST00000409096 ZKSCAN3Q9BRR0 538 aa4.49□□□□□ -1.69
CUL3-203ENST00000409096 C12orf49Q9H741 205 aa4.49□□□□□ -1.69
CUL3-203ENST00000409096 KLF15Q9UIH9 416 aa4.49□□□□□ -1.69
CUL3-203ENST00000409096 SPG7Q9UQ90 795 aa4.49□□□□□ -1.69
CUL3-203ENST00000409096 PHF20L1A8MW92 1017 aa4.48□□□□□ -1.69
CUL3-203ENST00000409096 IGSF3O75054 1194 aa4.48□□□□□ -1.69
CUL3-203ENST00000409096 USP17L7P0C7H9 530 aa4.48□□□□□ -1.69
CUL3-203ENST00000409096 LAMC2Q13753 1193 aa4.48□□□□□ -1.69
CUL3-203ENST00000409096 METTL16Q86W50 562 aaKnown RBP4.48□□□□□ -1.69
CUL3-203ENST00000409096 NCAPG2Q86XI2 1143 aa4.48□□□□□ -1.69
CUL3-203ENST00000409096 TLR7Q9NYK1 1049 aaKnown RBP4.48□□□□□ -1.69
CUL3-203ENST00000409096 FBXO24O75426 580 aa4.48□□□□□ -1.69
CUL3-203ENST00000409096 NEFLP07196 543 aa4.48□□□□□ -1.69
CUL3-203ENST00000409096 ATP11AP98196 1134 aa4.48□□□□□ -1.69
CUL3-203ENST00000409096 RNFT1Q5M7Z0 435 aa4.48□□□□□ -1.69
CUL3-203ENST00000409096 CRELD1Q96HD1 420 aa4.48□□□□□ -1.69
CUL3-203ENST00000409096 NAGPAQ9UK23 515 aa4.48□□□□□ -1.69
CUL3-203ENST00000409096 F6X3S4 739 aa4.47□□□□□ -1.69
CUL3-203ENST00000409096 PSAPP07602 524 aa4.47□□□□□ -1.69
CUL3-203ENST00000409096 EIF4BP23588 611 aaKnown RBP4.47□□□□□ -1.69
CUL3-203ENST00000409096 NT5DC4Q86YG4 428 aa4.47□□□□□ -1.69
CUL3-203ENST00000409096 C11orf16Q9NQ32 467 aa4.47□□□□□ -1.69
CUL3-203ENST00000409096 PRR12Q9ULL5 1215 aa4.47□□□□□ -1.69
CUL3-203ENST00000409096 PCDHGB7Q9Y5F8 929 aa4.47□□□□□ -1.69
CUL3-203ENST00000409096 ERBB4Q15303 1308 aa4.47□□□□□ -1.69
CUL3-203ENST00000409096 SCAMP3O14828 347 aaKnown RBP4.47□□□□□ -1.69
CUL3-203ENST00000409096 GRIA4P48058 902 aa4.47□□□□□ -1.69
CUL3-203ENST00000409096 RAD51AP2Q09MP3 1159 aa4.47□□□□□ -1.69
CUL3-203ENST00000409096 SV2AQ7L0J3 742 aa4.47□□□□□ -1.69
CUL3-203ENST00000409096 CEP120Q8N960 986 aa4.47□□□□□ -1.69
CUL3-203ENST00000409096 C3orf58Q8NDZ4 430 aa4.47□□□□□ -1.69
CUL3-203ENST00000409096 TRERF1Q96PN7 1200 aa4.47□□□□□ -1.69
CUL3-203ENST00000409096 OSMRQ99650 979 aa4.47□□□□□ -1.69
CUL3-203ENST00000409096 EHD4Q9H223 541 aa4.47□□□□□ -1.69
CUL3-203ENST00000409096 ABCB6Q9NP58 842 aa4.47□□□□□ -1.69
CUL3-203ENST00000409096 DZANK1Q9NVP4 752 aa4.47□□□□□ -1.69
CUL3-203ENST00000409096 NFKBIEO00221 500 aa4.46□□□□□ -1.69
CUL3-203ENST00000409096 KIF4AO95239 1232 aa4.46□□□□□ -1.69
CUL3-203ENST00000409096 BMP4P12644 408 aa4.46□□□□□ -1.69
CUL3-203ENST00000409096 SOX18P35713 384 aa4.46□□□□□ -1.69
CUL3-203ENST00000409096 ZNF394Q53GI3 561 aa4.46□□□□□ -1.69
CUL3-203ENST00000409096 FAM182BQ5T319 152 aa4.46□□□□□ -1.69
CUL3-203ENST00000409096 ZNF468Q5VIY5 522 aaPredicted RBP4.46□□□□□ -1.69
CUL3-203ENST00000409096 NANOS1Q8WY41 292 aaKnown RBP4.46□□□□□ -1.69
CUL3-203ENST00000409096 TCF12Q99081 682 aa4.46□□□□□ -1.69
CUL3-203ENST00000409096 SUV39H2Q9H5I1 410 aa4.46□□□□□ -1.69
CUL3-203ENST00000409096 DNAJB12Q9NXW2 375 aaKnown RBP4.46□□□□□ -1.69
CUL3-203ENST00000409096 NXF1Q9UBU9 619 aaKnown RBP4.46□□□□□ -1.69
CUL3-203ENST00000409096 EDN3P14138 238 aa4.46□□□□□ -1.7
CUL3-203ENST00000409096 MX2P20592 715 aa4.46□□□□□ -1.7
CUL3-203ENST00000409096 FCGRTP55899 365 aa4.46□□□□□ -1.7
CUL3-203ENST00000409096 PLAURQ03405 335 aa4.46□□□□□ -1.7
CUL3-203ENST00000409096 GMCL1Q96IK5 515 aa4.46□□□□□ -1.7
CUL3-203ENST00000409096 TRIM56Q9BRZ2 755 aaKnown RBP4.46□□□□□ -1.7
CUL3-203ENST00000409096 RASSF4Q9H2L5 321 aa4.46□□□□□ -1.7
CUL3-203ENST00000409096 PHF24Q9UPV7 400 aa4.46□□□□□ -1.7
CUL3-203ENST00000409096 MAP3K6O95382 1288 aa4.45□□□□□ -1.7
CUL3-203ENST00000409096 FGD1P98174 961 aa4.45□□□□□ -1.7
CUL3-203ENST00000409096 SPRED3Q2MJR0 410 aa4.45□□□□□ -1.7
CUL3-203ENST00000409096 UBE2OQ9C0C9 1292 aaKnown RBP4.45□□□□□ -1.7
CUL3-203ENST00000409096 NEURL1BA8MQ27 555 aa4.45□□□□□ -1.7
CUL3-203ENST00000409096 CPB1P15086 417 aa4.45□□□□□ -1.7
CUL3-203ENST00000409096 ERCC5P28715 1186 aaPredicted RBP4.45□□□□□ -1.7
CUL3-203ENST00000409096 GPLD1P80108 840 aa4.45□□□□□ -1.7
CUL3-203ENST00000409096 KIAA0319Q5VV43 1072 aa4.45□□□□□ -1.7
CUL3-203ENST00000409096 FCHSD1Q86WN1 690 aa4.45□□□□□ -1.7
CUL3-203ENST00000409096 TRPM4Q8TD43 1214 aa4.45□□□□□ -1.7
CUL3-203ENST00000409096 LIN7BQ9HAP6 207 aa4.45□□□□□ -1.7
CUL3-203ENST00000409096 FAM8A1Q9UBU6 413 aa4.45□□□□□ -1.7
CUL3-203ENST00000409096 LOC102724428A0A0B4J2F2 783 aa4.44□□□□□ -1.7
CUL3-203ENST00000409096 EIF2AK2P19525 551 aaKnown RBP4.44□□□□□ -1.7
CUL3-203ENST00000409096 ZNF76P36508 570 aa4.44□□□□□ -1.7
CUL3-203ENST00000409096 TNNI2P48788 182 aa4.44□□□□□ -1.7
CUL3-203ENST00000409096 NRLP54845 237 aa4.44□□□□□ -1.7
CUL3-203ENST00000409096 SIK1P57059 783 aa4.44□□□□□ -1.7
CUL3-203ENST00000409096 KRT76Q01546 638 aa4.44□□□□□ -1.7
CUL3-203ENST00000409096 HYAL2Q12891 473 aa4.44□□□□□ -1.7
CUL3-203ENST00000409096 CCNJLQ8IV13 435 aa4.44□□□□□ -1.7
CUL3-203ENST00000409096 PMEPA1Q969W9 287 aa4.44□□□□□ -1.7
CUL3-203ENST00000409096 COPRSQ9NQ92 184 aa4.44□□□□□ -1.7
CUL3-203ENST00000409096 H3BM21 787 aa4.44□□□□□ -1.7
CUL3-203ENST00000409096 RACK1P63244 317 aaKnown RBP4.44□□□□□ -1.7
CUL3-203ENST00000409096 LCE2CQ5TA81 110 aa4.44□□□□□ -1.7
CUL3-203ENST00000409096 FOXR1Q6PIV2 292 aa4.44□□□□□ -1.7
CUL3-203ENST00000409096 FAM35AQ86V20 835 aa4.44□□□□□ -1.7
CUL3-203ENST00000409096 ASAP3Q8TDY4 903 aa4.44□□□□□ -1.7
CUL3-203ENST00000409096 COL25A1Q9BXS0 654 aaPredicted RBP4.44□□□□□ -1.7
CUL3-203ENST00000409096 OXCT2Q9BYC2 517 aaPredicted RBP4.44□□□□□ -1.7
CUL3-203ENST00000409096 HOXD8P13378 290 aaPredicted RBP4.44□□□□□ -1.7
CUL3-203ENST00000409096 MAP3K10Q02779 954 aa4.44□□□□□ -1.7
CUL3-203ENST00000409096 PERM1Q5SV97 790 aa4.44□□□□□ -1.7
CUL3-203ENST00000409096 C1orf229Q6ZS94 237 aaPredicted RBP4.44□□□□□ -1.7
CUL3-203ENST00000409096 RNF34Q969K3 372 aa4.44□□□□□ -1.7
CUL3-203ENST00000409096 POP1Q99575 1024 aaKnown RBP4.44□□□□□ -1.7
CUL3-203ENST00000409096 AKAP2Q9Y2D5 859 aa4.44□□□□□ -1.7
CUL3-203ENST00000409096 ADH7P40394 386 aa4.43□□□□□ -1.7
CUL3-203ENST00000409096 TPTE2Q6XPS3 522 aa4.43□□□□□ -1.7
CUL3-203ENST00000409096 MDFIQ99750 246 aa4.43□□□□□ -1.7
CUL3-203ENST00000409096 ACBD3Q9H3P7 528 aa4.43□□□□□ -1.7
CUL3-203ENST00000409096 GGA1Q9UJY5 639 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms