RNA–Protein interactions for RNA: ENST00000408378.1

MIR548I3-201, Transcript of microRNA 548i-3, humanhuman

BASIC

Gene MIR548I3, Length 149 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR548I3-201ENST00000408378 PPME1Q9Y570 386 aa5.53□□□□□ -1.52
MIR548I3-201ENST00000408378 ARID4AP29374 1257 aaPredicted RBP5.52□□□□□ -1.53
MIR548I3-201ENST00000408378 HIF1AQ16665 826 aa5.52□□□□□ -1.53
MIR548I3-201ENST00000408378 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.52□□□□□ -1.53
MIR548I3-201ENST00000408378 UBASH3BQ8TF42 649 aa5.52□□□□□ -1.53
MIR548I3-201ENST00000408378 PAK6Q9NQU5 681 aaPredicted RBP5.52□□□□□ -1.53
MIR548I3-201ENST00000408378 BIN1O00499 593 aa5.51□□□□□ -1.53
MIR548I3-201ENST00000408378 DDX3YO15523 660 aaKnown RBP5.51□□□□□ -1.53
MIR548I3-201ENST00000408378 RXRBP28702 533 aa5.51□□□□□ -1.53
MIR548I3-201ENST00000408378 NRLP54845 237 aa5.51□□□□□ -1.53
MIR548I3-201ENST00000408378 SHISA5Q8N114 240 aa5.51□□□□□ -1.53
MIR548I3-201ENST00000408378 BSDC1Q9NW68 430 aaPredicted RBP5.51□□□□□ -1.53
MIR548I3-201ENST00000408378 LOC102724428A0A0B4J2F2 783 aa5.5□□□□□ -1.53
MIR548I3-201ENST00000408378 CYP26A1O43174 497 aa5.5□□□□□ -1.53
MIR548I3-201ENST00000408378 SIK1P57059 783 aa5.5□□□□□ -1.53
MIR548I3-201ENST00000408378 IRF5Q13568 498 aa5.5□□□□□ -1.53
MIR548I3-201ENST00000408378 BANK1Q8NDB2 785 aa5.5□□□□□ -1.53
MIR548I3-201ENST00000408378 FAM168AQ92567 244 aa5.5□□□□□ -1.53
MIR548I3-201ENST00000408378 RBSNQ9H1K0 784 aa5.5□□□□□ -1.53
MIR548I3-201ENST00000408378 TGFBR3LH3BV60 316 aa5.49□□□□□ -1.53
MIR548I3-201ENST00000408378 GAS2O43903 313 aaKnown RBP5.49□□□□□ -1.53
MIR548I3-201ENST00000408378 SKIP12755 728 aa5.49□□□□□ -1.53
MIR548I3-201ENST00000408378 IDH3AP50213 366 aa5.49□□□□□ -1.53
MIR548I3-201ENST00000408378 SEMA3FQ13275 785 aa5.49□□□□□ -1.53
MIR548I3-201ENST00000408378 PLCL1Q15111 1095 aa5.49□□□□□ -1.53
MIR548I3-201ENST00000408378 LCNL1Q6ZST4 164 aa5.49□□□□□ -1.53
MIR548I3-201ENST00000408378 TPCN2Q8NHX9 752 aa5.49□□□□□ -1.53
MIR548I3-201ENST00000408378 CHMP7Q8WUX9 453 aaPredicted RBP5.49□□□□□ -1.53
MIR548I3-201ENST00000408378 LACRTQ9GZZ8 138 aa5.49□□□□□ -1.53
MIR548I3-201ENST00000408378 LMCD1Q9NZU5 365 aa5.49□□□□□ -1.53
MIR548I3-201ENST00000408378 BCS1LQ9Y276 419 aa5.49□□□□□ -1.53
MIR548I3-201ENST00000408378 MAP4P27816 1152 aaKnown RBP5.48□□□□□ -1.53
MIR548I3-201ENST00000408378 CFPP27918 469 aa5.48□□□□□ -1.53
MIR548I3-201ENST00000408378 NCOA4Q13772 614 aa5.48□□□□□ -1.53
MIR548I3-201ENST00000408378 SGO2Q562F6 1265 aa5.48□□□□□ -1.53
MIR548I3-201ENST00000408378 IER5Q5VY09 327 aa5.48□□□□□ -1.53
MIR548I3-201ENST00000408378 POTEAQ6S8J7 498 aa5.48□□□□□ -1.53
MIR548I3-201ENST00000408378 TOX2Q96NM4 488 aa5.48□□□□□ -1.53
MIR548I3-201ENST00000408378 MUC3BQ9H195 1237 aa5.48□□□□□ -1.53
MIR548I3-201ENST00000408378 TLR7Q9NYK1 1049 aaKnown RBP5.48□□□□□ -1.53
MIR548I3-201ENST00000408378 ECM1Q16610 540 aa5.47□□□□□ -1.53
MIR548I3-201ENST00000408378 ZNF792Q3KQV3 632 aa5.47□□□□□ -1.53
MIR548I3-201ENST00000408378 DEPDC4Q8N2C3 294 aa5.47□□□□□ -1.53
MIR548I3-201ENST00000408378 FOXD4L4Q8WXT5 416 aaPredicted RBP5.47□□□□□ -1.53
MIR548I3-201ENST00000408378 DMGDHQ9UI17 866 aaKnown RBP5.47□□□□□ -1.53
MIR548I3-201ENST00000408378 USP20Q9Y2K6 914 aa5.47□□□□□ -1.53
MIR548I3-201ENST00000408378 PSAPP07602 524 aa5.46□□□□□ -1.54
MIR548I3-201ENST00000408378 FDX2Q6P4F2 183 aa5.46□□□□□ -1.54
MIR548I3-201ENST00000408378 ZNF574Q6ZN55 896 aaPredicted RBP5.46□□□□□ -1.54
MIR548I3-201ENST00000408378 ZSCAN18Q8TBC5 510 aaPredicted RBP5.46□□□□□ -1.54
MIR548I3-201ENST00000408378 KIAA1024Q9UPX6 916 aa5.46□□□□□ -1.54
MIR548I3-201ENST00000408378 HIF3AQ9Y2N7 669 aa5.46□□□□□ -1.54
MIR548I3-201ENST00000408378 ADAM11O75078 769 aa5.45□□□□□ -1.54
MIR548I3-201ENST00000408378 ZSCAN22P10073 491 aaPredicted RBP5.45□□□□□ -1.54
MIR548I3-201ENST00000408378 RASA1P20936 1047 aa5.45□□□□□ -1.54
MIR548I3-201ENST00000408378 INPP5BP32019 993 aa5.45□□□□□ -1.54
MIR548I3-201ENST00000408378 RAP1GAPP47736 663 aa5.45□□□□□ -1.54
MIR548I3-201ENST00000408378 NFKBIBQ15653 356 aa5.45□□□□□ -1.54
MIR548I3-201ENST00000408378 ANKRD34AQ69YU3 496 aa5.45□□□□□ -1.54
MIR548I3-201ENST00000408378 LRRC56Q8IYG6 542 aaPredicted RBP5.45□□□□□ -1.54
MIR548I3-201ENST00000408378 TSEN2Q8NCE0 465 aaKnown RBP5.45□□□□□ -1.54
MIR548I3-201ENST00000408378 LRRC4CQ9HCJ2 640 aa5.45□□□□□ -1.54
MIR548I3-201ENST00000408378 GOPCQ9HD26 462 aa5.45□□□□□ -1.54
MIR548I3-201ENST00000408378 FSCN2O14926 492 aa5.44□□□□□ -1.54
MIR548I3-201ENST00000408378 C21orf2O43822 256 aa5.44□□□□□ -1.54
MIR548I3-201ENST00000408378 ARSDP51689 593 aa5.44□□□□□ -1.54
MIR548I3-201ENST00000408378 CCDC102BQ68D86 513 aa5.44□□□□□ -1.54
MIR548I3-201ENST00000408378 CILP2Q8IUL8 1156 aa5.44□□□□□ -1.54
MIR548I3-201ENST00000408378 FAM84AQ96KN4 292 aa5.44□□□□□ -1.54
MIR548I3-201ENST00000408378 KLK14Q9P0G3 267 aa5.44□□□□□ -1.54
MIR548I3-201ENST00000408378 MMP20O60882 483 aa5.43□□□□□ -1.54
MIR548I3-201ENST00000408378 MESP2Q0VG99 397 aa5.43□□□□□ -1.54
MIR548I3-201ENST00000408378 CPSF6Q16630 551 aaKnown RBP eCLIP5.43□□□□□ -1.54
MIR548I3-201ENST00000408378 RTN1Q16799 776 aa5.43□□□□□ -1.54
MIR548I3-201ENST00000408378 TTLL10Q6ZVT0 673 aa5.43□□□□□ -1.54
MIR548I3-201ENST00000408378 C1QL4Q86Z23 238 aa5.43□□□□□ -1.54
MIR548I3-201ENST00000408378 METTL22Q9BUU2 404 aaPredicted RBP5.43□□□□□ -1.54
MIR548I3-201ENST00000408378 C2orf49Q9BVC5 232 aaPredicted RBP5.43□□□□□ -1.54
MIR548I3-201ENST00000408378 ATAD2Q6PL18 1390 aa5.42□□□□□ -1.54
MIR548I3-201ENST00000408378 CDC27P30260 824 aa5.42□□□□□ -1.54
MIR548I3-201ENST00000408378 CEP135Q66GS9 1140 aa5.42□□□□□ -1.54
MIR548I3-201ENST00000408378 FAM117BQ6P1L5 589 aa5.42□□□□□ -1.54
MIR548I3-201ENST00000408378 TMEM40Q8WWA1 233 aa5.42□□□□□ -1.54
MIR548I3-201ENST00000408378 SCG3Q8WXD2 468 aaKnown RBP5.42□□□□□ -1.54
MIR548I3-201ENST00000408378 KLHDC7BQ96G42 594 aa5.42□□□□□ -1.54
MIR548I3-201ENST00000408378 TBC1D32Q96NH3 1257 aa5.42□□□□□ -1.54
MIR548I3-201ENST00000408378 RUSC1Q9BVN2 902 aa5.42□□□□□ -1.54
MIR548I3-201ENST00000408378 RNF208Q9H0X6 261 aa5.42□□□□□ -1.54
MIR548I3-201ENST00000408378 RC3H2Q9HBD1 1191 aaKnown RBP5.42□□□□□ -1.54
MIR548I3-201ENST00000408378 PRM3Q9NNZ6 103 aa5.42□□□□□ -1.54
MIR548I3-201ENST00000408378 ZC3H7BQ9UGR2 993 aaKnown RBP5.42□□□□□ -1.54
MIR548I3-201ENST00000408378 LRRC10BA6NIK2 292 aa5.41□□□□□ -1.54
MIR548I3-201ENST00000408378 FAM170BA6NMN3 283 aa5.41□□□□□ -1.54
MIR548I3-201ENST00000408378 TM4SF5O14894 197 aa5.41□□□□□ -1.54
MIR548I3-201ENST00000408378 ADMP35318 185 aa5.41□□□□□ -1.54
MIR548I3-201ENST00000408378 NLRP12P59046 1061 aa5.41□□□□□ -1.54
MIR548I3-201ENST00000408378 ATP11AP98196 1134 aa5.41□□□□□ -1.54
MIR548I3-201ENST00000408378 CACTIN-AS1Q8N1I8 211 aa5.41□□□□□ -1.54
MIR548I3-201ENST00000408378 KLHL23Q8NBE8 558 aa5.41□□□□□ -1.54
MIR548I3-201ENST00000408378 CSRNP1Q96S65 589 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms