RNA–Protein interactions for RNA: ENST00000406310.5

ESRRA-203, Transcript of estrogen related receptor alpha, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ESRRA, Length 2,218 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ESRRA-203ENST00000406310 E4F1Q66K89 784 aaPredicted RBP27.82■■■□□ 2.04
ESRRA-203ENST00000406310 ENGASEQ8NFI3 743 aa27.82■■■□□ 2.04
ESRRA-203ENST00000406310 CHMP4CQ96CF2 233 aa27.82■■■□□ 2.04
ESRRA-203ENST00000406310 SFPQP23246 707 aaKnown RBP eCLIP27.82■■■□□ 2.04
ESRRA-203ENST00000406310 ADD1P35611 737 aaKnown RBP27.82■■■□□ 2.04
ESRRA-203ENST00000406310 CLCN6P51797 869 aa27.82■■■□□ 2.04
ESRRA-203ENST00000406310 ERCC6LQ2NKX8 1250 aa27.82■■■□□ 2.04
ESRRA-203ENST00000406310 AOPEPQ8N6M6 819 aa27.82■■■□□ 2.04
ESRRA-203ENST00000406310 PHLPP2Q6ZVD8 1323 aa27.81■■■□□ 2.04
ESRRA-203ENST00000406310 RFX7Q2KHR2 1363 aa27.81■■■□□ 2.04
ESRRA-203ENST00000406310 PNMA6AP0CW24 399 aaPredicted RBP27.8■■■□□ 2.04
ESRRA-203ENST00000406310 HSP90B1P14625 803 aaKnown RBP27.8■■■□□ 2.04
ESRRA-203ENST00000406310 TMCO3Q6UWJ1 677 aa27.8■■■□□ 2.04
ESRRA-203ENST00000406310 SLIT1O75093 1534 aa27.8■■■□□ 2.04
ESRRA-203ENST00000406310 ZRSR1Q15695 479 aaKnown RBP27.8■■■□□ 2.04
ESRRA-203ENST00000406310 TAF5LO75529 589 aa27.79■■■□□ 2.04
ESRRA-203ENST00000406310 NBPF11Q86T75 865 aa27.79■■■□□ 2.04
ESRRA-203ENST00000406310 U3KPZ7 1027 aaPredicted RBP27.79■■■□□ 2.04
ESRRA-203ENST00000406310 HMGB1P09429 215 aaKnown RBP27.79■■■□□ 2.04
ESRRA-203ENST00000406310 PLPPR3Q6T4P5 718 aa27.79■■■□□ 2.04
ESRRA-203ENST00000406310 GOLPH3LQ9H4A5 285 aa27.79■■■□□ 2.04
ESRRA-203ENST00000406310 ARHGAP29Q52LW3 1261 aa27.78■■■□□ 2.04
ESRRA-203ENST00000406310 SYT10Q6XYQ8 523 aa27.78■■■□□ 2.04
ESRRA-203ENST00000406310 TXLNBQ8N3L3 684 aa27.78■■■□□ 2.04
ESRRA-203ENST00000406310 UBXN4Q92575 508 aa27.78■■■□□ 2.04
ESRRA-203ENST00000406310 ZKSCAN7Q9P0L1 754 aaPredicted RBP27.78■■■□□ 2.04
ESRRA-203ENST00000406310 PIK3C2AO00443 1686 aa27.78■■■□□ 2.04
ESRRA-203ENST00000406310 EAF2Q96CJ1 260 aaPredicted RBP27.77■■■□□ 2.04
ESRRA-203ENST00000406310 DBF4Q9UBU7 674 aaPredicted RBP27.77■■■□□ 2.04
ESRRA-203ENST00000406310 PFKFB2O60825 505 aa27.77■■■□□ 2.04
ESRRA-203ENST00000406310 ZRANB2O95218 330 aaKnown RBP eCLIP27.77■■■□□ 2.044e-8■■■■□ 20.3
ESRRA-203ENST00000406310 Q6ZUG5 572 aa27.77■■■□□ 2.04
ESRRA-203ENST00000406310 PA2G4Q9UQ80 394 aaKnown RBP27.77■■■□□ 2.04
ESRRA-203ENST00000406310 HOXC9P31274 260 aa27.76■■■□□ 2.04
ESRRA-203ENST00000406310 COL9A3Q14050 684 aaPredicted RBP27.76■■■□□ 2.04
ESRRA-203ENST00000406310 FSIP1Q8NA03 581 aa27.76■■■□□ 2.04
ESRRA-203ENST00000406310 BCL11BQ9C0K0 894 aaPredicted RBP27.76■■■□□ 2.04
ESRRA-203ENST00000406310 NCAPD2Q15021 1401 aa27.76■■■□□ 2.03
ESRRA-203ENST00000406310 ETF1P62495 437 aaKnown RBP27.76■■■□□ 2.03
ESRRA-203ENST00000406310 DDX11Q96FC9 970 aa27.76■■■□□ 2.03
ESRRA-203ENST00000406310 ST7Q9NRC1 585 aa27.76■■■□□ 2.03
ESRRA-203ENST00000406310 SASH1O94885 1247 aa27.75■■■□□ 2.03
ESRRA-203ENST00000406310 MRPS27Q92552 414 aaKnown RBP27.75■■■□□ 2.03
ESRRA-203ENST00000406310 USP54Q70EL1 1684 aa27.75■■■□□ 2.03
ESRRA-203ENST00000406310 A0A1W2PQ27 194 aa27.75■■■□□ 2.03
ESRRA-203ENST00000406310 A0A1W2PQ64 194 aa27.75■■■□□ 2.03
ESRRA-203ENST00000406310 A0A1W2PQD8 194 aa27.75■■■□□ 2.03
ESRRA-203ENST00000406310 CEBPZQ03701 1054 aaKnown RBP27.75■■■□□ 2.03
ESRRA-203ENST00000406310 MRC1P22897 1456 aa27.74■■■□□ 2.03
ESRRA-203ENST00000406310 ZBTB22O15209 634 aa27.74■■■□□ 2.03
ESRRA-203ENST00000406310 PLA2G4AP47712 749 aa27.74■■■□□ 2.03
ESRRA-203ENST00000406310 ZNF589Q86UQ0 364 aaPredicted RBP27.74■■■□□ 2.03
ESRRA-203ENST00000406310 BOLA2Q9H3K6 86 aa27.74■■■□□ 2.03
ESRRA-203ENST00000406310 TAF6LQ9Y6J9 622 aa27.74■■■□□ 2.03
ESRRA-203ENST00000406310 UTYO14607 1347 aa27.74■■■□□ 2.03
ESRRA-203ENST00000406310 NPHP1O15259 732 aa27.73■■■□□ 2.03
ESRRA-203ENST00000406310 ME1P48163 572 aa27.73■■■□□ 2.03
ESRRA-203ENST00000406310 SCRN1Q12765 414 aa27.73■■■□□ 2.03
ESRRA-203ENST00000406310 GPS2Q13227 327 aa27.73■■■□□ 2.03
ESRRA-203ENST00000406310 KSR2Q6VAB6 950 aa27.73■■■□□ 2.03
ESRRA-203ENST00000406310 TMC6Q7Z403 805 aa27.73■■■□□ 2.03
ESRRA-203ENST00000406310 IPO4Q8TEX9 1081 aaKnown RBP27.73■■■□□ 2.03
ESRRA-203ENST00000406310 ORC3Q9UBD5 711 aaPredicted RBP27.73■■■□□ 2.03
ESRRA-203ENST00000406310 EFCAB8A8MWE9 144 aa27.73■■■□□ 2.03
ESRRA-203ENST00000406310 SMC2O95347 1197 aa27.73■■■□□ 2.03
ESRRA-203ENST00000406310 ARMCX5Q6P1M9 558 aa27.73■■■□□ 2.03
ESRRA-203ENST00000406310 HOMER1Q86YM7 354 aa27.73■■■□□ 2.03
ESRRA-203ENST00000406310 MNS1Q8NEH6 495 aa27.73■■■□□ 2.03
ESRRA-203ENST00000406310 USP28Q96RU2 1077 aa27.73■■■□□ 2.03
ESRRA-203ENST00000406310 SDF4Q9BRK5 362 aa27.73■■■□□ 2.03
ESRRA-203ENST00000406310 CCDC8Q9H0W5 538 aaPredicted RBP27.73■■■□□ 2.03
ESRRA-203ENST00000406310 HNRNPH2P55795 449 aaKnown RBP27.72■■■□□ 2.03
ESRRA-203ENST00000406310 MUM1L1Q5H9M0 696 aa27.72■■■□□ 2.03
ESRRA-203ENST00000406310 FMR1NBQ8N0W7 255 aaPredicted RBP27.72■■■□□ 2.03
ESRRA-203ENST00000406310 NSUN7Q8NE18 718 aaKnown RBP27.72■■■□□ 2.03
ESRRA-203ENST00000406310 XPO4Q9C0E2 1151 aaKnown RBP27.72■■■□□ 2.03
ESRRA-203ENST00000406310 ADALQ6DHV7 355 aa27.72■■■□□ 2.03
ESRRA-203ENST00000406310 MAP3K2Q9Y2U5 619 aa27.72■■■□□ 2.03
ESRRA-203ENST00000406310 ADAMTS13Q76LX8 1427 aa27.71■■■□□ 2.03
ESRRA-203ENST00000406310 CCDC158Q5M9N0 1113 aa27.71■■■□□ 2.03
ESRRA-203ENST00000406310 KIAA1468Q9P260 1216 aa27.71■■■□□ 2.03
ESRRA-203ENST00000406310 ABCC6O95255 1503 aa27.71■■■□□ 2.03
ESRRA-203ENST00000406310 FCHSD1Q86WN1 690 aa27.71■■■□□ 2.03
ESRRA-203ENST00000406310 DNAI1Q9UI46 699 aa27.71■■■□□ 2.03
ESRRA-203ENST00000406310 IFNKQ9P0W0 207 aa27.7■■■□□ 2.02
ESRRA-203ENST00000406310 GRM8O00222 908 aa27.69■■■□□ 2.02
ESRRA-203ENST00000406310 CEBPAP49715 358 aaPredicted RBP27.69■■■□□ 2.02
ESRRA-203ENST00000406310 NGDNQ8NEJ9 315 aaKnown RBP27.69■■■□□ 2.02
ESRRA-203ENST00000406310 LINS1Q8NG48 757 aa27.69■■■□□ 2.02
ESRRA-203ENST00000406310 TMEM2Q9UHN6 1383 aa27.69■■■□□ 2.02
ESRRA-203ENST00000406310 LRRFIP1Q32MZ4 808 aaKnown RBP27.69■■■□□ 2.02
ESRRA-203ENST00000406310 PTPDC1A2A3K4 754 aa27.68■■■□□ 2.02
ESRRA-203ENST00000406310 PSME1Q06323 249 aa27.68■■■□□ 2.02
ESRRA-203ENST00000406310 RTEL1Q9NZ71 1219 aa27.68■■■□□ 2.02
ESRRA-203ENST00000406310 UBXN6Q9BZV1 441 aa27.68■■■□□ 2.02
ESRRA-203ENST00000406310 NAP1L2Q9ULW6 460 aaPredicted RBP27.68■■■□□ 2.02
ESRRA-203ENST00000406310 DHX32Q7L7V1 743 aaKnown RBP27.67■■■□□ 2.02
ESRRA-203ENST00000406310 IKBKBO14920 756 aa27.67■■■□□ 2.02
ESRRA-203ENST00000406310 CBFA2T2O43439 604 aa27.67■■■□□ 2.02
ESRRA-203ENST00000406310 TADA3O75528 432 aa27.67■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms