RNA–Protein interactions for RNA: ENST00000403663.6

TRIOBP-203, Transcript of TRIO and F-actin binding protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIOBP, Length 2,324 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOBP-203ENST00000403663 DDX60Q8IY21 1712 aaKnown RBP28.3■■■□□ 2.12
TRIOBP-203ENST00000403663 CDHR2Q9BYE9 1310 aa28.29■■■□□ 2.12
TRIOBP-203ENST00000403663 CCDC39Q9UFE4 941 aa28.29■■■□□ 2.12
TRIOBP-203ENST00000403663 AKT1S1Q96B36 256 aa28.29■■■□□ 2.12
TRIOBP-203ENST00000403663 UTP14AQ9BVJ6 771 aaKnown RBP28.29■■■□□ 2.12
TRIOBP-203ENST00000403663 PARP10Q53GL7 1025 aa28.28■■■□□ 2.12
TRIOBP-203ENST00000403663 IL1RAPL2Q9NP60 686 aa28.28■■■□□ 2.12
TRIOBP-203ENST00000403663 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.28■■■□□ 2.12
TRIOBP-203ENST00000403663 HCLS1P14317 486 aaPredicted RBP28.27■■■□□ 2.12
TRIOBP-203ENST00000403663 PTPN12Q05209 780 aaKnown RBP28.27■■■□□ 2.12
TRIOBP-203ENST00000403663 CAMKK2Q96RR4 588 aa28.27■■■□□ 2.12
TRIOBP-203ENST00000403663 LRRCC1Q9C099 1032 aa28.27■■■□□ 2.12
TRIOBP-203ENST00000403663 SYCE3A1L190 88 aa28.27■■■□□ 2.12
TRIOBP-203ENST00000403663 SASS6Q6UVJ0 657 aa28.27■■■□□ 2.12
TRIOBP-203ENST00000403663 PLA2G12BQ9BX93 195 aa28.27■■■□□ 2.12
TRIOBP-203ENST00000403663 ADRA2BP18089 450 aa28.26■■■□□ 2.12
TRIOBP-203ENST00000403663 DEFB132Q7Z7B7 95 aa28.26■■■□□ 2.12
TRIOBP-203ENST00000403663 COL24A1Q17RW2 1714 aa28.26■■■□□ 2.12
TRIOBP-203ENST00000403663 TFCP2L1Q9NZI6 479 aa28.26■■■□□ 2.11
TRIOBP-203ENST00000403663 SH3TC1Q8TE82 1336 aa28.26■■■□□ 2.11
TRIOBP-203ENST00000403663 ST18O60284 1047 aa28.25■■■□□ 2.11
TRIOBP-203ENST00000403663 NSFL1CQ9UNZ2 370 aaKnown RBP28.25■■■□□ 2.11
TRIOBP-203ENST00000403663 RHPN1Q8TCX5 695 aa28.25■■■□□ 2.11
TRIOBP-203ENST00000403663 ZNF594Q96JF6 807 aaPredicted RBP28.25■■■□□ 2.11
TRIOBP-203ENST00000403663 CASZ1Q86V15 1759 aa28.24■■■□□ 2.11
TRIOBP-203ENST00000403663 OS9Q13438 667 aaPredicted RBP28.24■■■□□ 2.11
TRIOBP-203ENST00000403663 TTLL11Q8NHH1 800 aa28.24■■■□□ 2.11
TRIOBP-203ENST00000403663 CHAMP1Q96JM3 812 aa28.24■■■□□ 2.11
TRIOBP-203ENST00000403663 CSF1RP07333 972 aa28.23■■■□□ 2.11
TRIOBP-203ENST00000403663 GYS1P13807 737 aa28.23■■■□□ 2.11
TRIOBP-203ENST00000403663 SMAP1Q8IYB5 467 aaPredicted RBP28.23■■■□□ 2.11
TRIOBP-203ENST00000403663 COPRSQ9NQ92 184 aa28.23■■■□□ 2.11
TRIOBP-203ENST00000403663 LAMB2P55268 1798 aa28.23■■■□□ 2.11
TRIOBP-203ENST00000403663 RGL2O15211 777 aa28.23■■■□□ 2.11
TRIOBP-203ENST00000403663 SASH1O94885 1247 aa28.23■■■□□ 2.11
TRIOBP-203ENST00000403663 CTSWP56202 376 aa28.23■■■□□ 2.11
TRIOBP-203ENST00000403663 ERFEQ4G0M1 354 aa28.23■■■□□ 2.11
TRIOBP-203ENST00000403663 SETDB2Q96T68 719 aa28.22■■■□□ 2.11
TRIOBP-203ENST00000403663 GREM2Q9H772 168 aa28.22■■■□□ 2.11
TRIOBP-203ENST00000403663 RAB11FIP3O75154 756 aa28.21■■■□□ 2.11
TRIOBP-203ENST00000403663 CCDC24Q8N4L8 307 aa28.21■■■□□ 2.11
TRIOBP-203ENST00000403663 PDE8AO60658 829 aa28.21■■■□□ 2.11
TRIOBP-203ENST00000403663 NFIXQ14938 502 aa28.21■■■□□ 2.11
TRIOBP-203ENST00000403663 COL23A1Q86Y22 540 aaPredicted RBP28.2■■■□□ 2.11
TRIOBP-203ENST00000403663 KIF1BPQ96EK5 621 aa28.2■■■□□ 2.11
TRIOBP-203ENST00000403663 ABCC12Q96J65 1359 aa28.2■■■□□ 2.1
TRIOBP-203ENST00000403663 TSHZ3Q63HK5 1081 aa28.19■■■□□ 2.1
TRIOBP-203ENST00000403663 C3orf67Q6ZVT6 689 aa28.19■■■□□ 2.1
TRIOBP-203ENST00000403663 G3BP1Q13283 466 aaKnown RBP eCLIP28.19■■■□□ 2.1
TRIOBP-203ENST00000403663 SDSP20132 328 aa28.18■■■□□ 2.1
TRIOBP-203ENST00000403663 HSP90AB4PQ58FF6 505 aa28.18■■■□□ 2.1
TRIOBP-203ENST00000403663 MBD3O95983 291 aa28.18■■■□□ 2.1
TRIOBP-203ENST00000403663 RNF214Q8ND24 703 aa28.18■■■□□ 2.1
TRIOBP-203ENST00000403663 PUS3Q9BZE2 481 aaKnown RBP28.18■■■□□ 2.1
TRIOBP-203ENST00000403663 SALL3Q9BXA9 1300 aa28.17■■■□□ 2.1
TRIOBP-203ENST00000403663 LRRC24Q50LG9 513 aa28.17■■■□□ 2.1
TRIOBP-203ENST00000403663 NBPF5PQ86XG9 351 aaPredicted RBP28.17■■■□□ 2.1
TRIOBP-203ENST00000403663 COL4A1P02462 1669 aa28.17■■■□□ 2.1
TRIOBP-203ENST00000403663 TAF1P21675 1872 aa28.17■■■□□ 2.1
TRIOBP-203ENST00000403663 CCDC57Q2TAC2 916 aa28.17■■■□□ 2.1
TRIOBP-203ENST00000403663 ARID3AQ99856 593 aa28.17■■■□□ 2.1
TRIOBP-203ENST00000403663 PNPLA7Q6ZV29 1317 aa28.16■■■□□ 2.1
TRIOBP-203ENST00000403663 ITGA6P23229 1130 aa28.16■■■□□ 2.1
TRIOBP-203ENST00000403663 SF3B2Q13435 895 aaKnown RBP28.16■■■□□ 2.1
TRIOBP-203ENST00000403663 ATG9AQ7Z3C6 839 aa28.16■■■□□ 2.1
TRIOBP-203ENST00000403663 CASC1Q6TDU7 716 aa28.15■■■□□ 2.1
TRIOBP-203ENST00000403663 BAG6P46379 1132 aa28.14■■■□□ 2.1
TRIOBP-203ENST00000403663 IFIT5Q13325 482 aaKnown RBP28.14■■■□□ 2.1
TRIOBP-203ENST00000403663 GTF2E1P29083 439 aaPredicted RBP28.13■■■□□ 2.09
TRIOBP-203ENST00000403663 KIAA2012Q0VF49 1180 aa28.13■■■□□ 2.09
TRIOBP-203ENST00000403663 TFCP2Q12800 502 aa28.13■■■□□ 2.09
TRIOBP-203ENST00000403663 SPEF2Q9C093 1822 aa28.13■■■□□ 2.09
TRIOBP-203ENST00000403663 ERC1Q8IUD2 1116 aa28.13■■■□□ 2.09
TRIOBP-203ENST00000403663 SEC31BQ9NQW1 1179 aa28.13■■■□□ 2.09
TRIOBP-203ENST00000403663 CARMIL3Q8ND23 1372 aa28.13■■■□□ 2.09
TRIOBP-203ENST00000403663 TNRC6CQ9HCJ0 1690 aaKnown RBP28.12■■■□□ 2.09
TRIOBP-203ENST00000403663 REC8O95072 547 aa28.12■■■□□ 2.09
TRIOBP-203ENST00000403663 PDE1AP54750 535 aa28.12■■■□□ 2.09
TRIOBP-203ENST00000403663 FOXD4L5Q5VV16 416 aaPredicted RBP28.12■■■□□ 2.09
TRIOBP-203ENST00000403663 FOXD4L4Q8WXT5 416 aaPredicted RBP28.12■■■□□ 2.09
TRIOBP-203ENST00000403663 EAF2Q96CJ1 260 aaPredicted RBP28.12■■■□□ 2.09
TRIOBP-203ENST00000403663 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP28.12■■■□□ 2.09
TRIOBP-203ENST00000403663 TM4SF1P30408 202 aa28.11■■■□□ 2.09
TRIOBP-203ENST00000403663 DDR1Q08345 913 aa28.11■■■□□ 2.09
TRIOBP-203ENST00000403663 EYA2O00167 538 aa28.1■■■□□ 2.09
TRIOBP-203ENST00000403663 MX1P20591 662 aa28.1■■■□□ 2.09
TRIOBP-203ENST00000403663 HMGB2P26583 209 aaKnown RBP28.1■■■□□ 2.09
TRIOBP-203ENST00000403663 SLC15A2Q16348 729 aa28.1■■■□□ 2.09
TRIOBP-203ENST00000403663 CCDC94Q9BW85 323 aaPredicted RBP28.1■■■□□ 2.09
TRIOBP-203ENST00000403663 NYXQ9GZU5 481 aa28.1■■■□□ 2.09
TRIOBP-203ENST00000403663 TSPY26PQ9H489 355 aa28.1■■■□□ 2.09
TRIOBP-203ENST00000403663 PTMAP06454 111 aaKnown RBP28.1■■■□□ 2.09
TRIOBP-203ENST00000403663 TPTE2Q6XPS3 522 aa28.1■■■□□ 2.09
TRIOBP-203ENST00000403663 MYRIPQ8NFW9 859 aa28.1■■■□□ 2.09
TRIOBP-203ENST00000403663 TLR7Q9NYK1 1049 aaKnown RBP28.1■■■□□ 2.09
TRIOBP-203ENST00000403663 ANKRD18BA2A2Z9 1011 aa28.09■■■□□ 2.09
TRIOBP-203ENST00000403663 BRD1O95696 1058 aa28.09■■■□□ 2.09
TRIOBP-203ENST00000403663 TAF7LQ5H9L4 462 aa28.09■■■□□ 2.09
TRIOBP-203ENST00000403663 SLC10A5Q5PT55 438 aa28.09■■■□□ 2.09
TRIOBP-203ENST00000403663 AACSQ86V21 672 aa28.09■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms