RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 C17orf53Q8N3J3 647 aaPredicted RBP23.51■■□□□ 1.35
CCDC47-202ENST00000403162 GOLGA6L6A8MZA4 724 aa23.51■■□□□ 1.35
CCDC47-202ENST00000403162 GRM8O00222 908 aa23.51■■□□□ 1.35
CCDC47-202ENST00000403162 CDC37L1Q7L3B6 337 aa23.51■■□□□ 1.35
CCDC47-202ENST00000403162 FAM200AQ8TCP9 573 aa23.51■■□□□ 1.35
CCDC47-202ENST00000403162 EAF2Q96CJ1 260 aaPredicted RBP23.51■■□□□ 1.35
CCDC47-202ENST00000403162 MED23Q9ULK4 1368 aa23.5■■□□□ 1.35
CCDC47-202ENST00000403162 PTCD1O75127 700 aaKnown RBP23.5■■□□□ 1.35
CCDC47-202ENST00000403162 G3BP1Q13283 466 aaKnown RBP eCLIP23.5■■□□□ 1.35
CCDC47-202ENST00000403162 MAP3K11Q16584 847 aa23.5■■□□□ 1.35
CCDC47-202ENST00000403162 KAZALD1Q96I82 304 aa23.5■■□□□ 1.35
CCDC47-202ENST00000403162 SUCLG2Q96I99 432 aa23.5■■□□□ 1.35
CCDC47-202ENST00000403162 NUP62CLQ9H1M0 184 aa23.5■■□□□ 1.35
CCDC47-202ENST00000403162 KCNF1Q9H3M0 494 aa23.5■■□□□ 1.35
CCDC47-202ENST00000403162 PLCB2Q00722 1185 aa23.5■■□□□ 1.35
CCDC47-202ENST00000403162 ATG3Q9NT62 314 aa23.5■■□□□ 1.35
CCDC47-202ENST00000403162 PAPPAQ13219 1627 aa23.49■■□□□ 1.35
CCDC47-202ENST00000403162 DTNBO60941 627 aa23.49■■□□□ 1.35
CCDC47-202ENST00000403162 SNRPA1P09661 255 aaKnown RBP23.49■■□□□ 1.35
CCDC47-202ENST00000403162 BLOC1S2Q6QNY1 142 aa23.49■■□□□ 1.35
CCDC47-202ENST00000403162 RPS6KB1P23443 525 aa23.48■■□□□ 1.35
CCDC47-202ENST00000403162 BICC1Q9H694 974 aaKnown RBP23.48■■□□□ 1.35
CCDC47-202ENST00000403162 A0A0D9SFI3 127 aa23.48■■□□□ 1.35
CCDC47-202ENST00000403162 TSGA10IPQ3SY00 556 aa23.48■■□□□ 1.35
CCDC47-202ENST00000403162 SCAND2PQ9GZW5 306 aaPredicted RBP23.48■■□□□ 1.35
CCDC47-202ENST00000403162 HMG20BQ9P0W2 317 aa23.48■■□□□ 1.35
CCDC47-202ENST00000403162 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.48■■□□□ 1.35
CCDC47-202ENST00000403162 KCNQ2O43526 872 aa23.47■■□□□ 1.35
CCDC47-202ENST00000403162 RGS17Q9UGC6 210 aaPredicted RBP23.47■■□□□ 1.35
CCDC47-202ENST00000403162 MRVI1Q9Y6F6 885 aa23.47■■□□□ 1.35
CCDC47-202ENST00000403162 KCPQ6ZWJ8 1503 aa23.47■■□□□ 1.35
CCDC47-202ENST00000403162 DDX58O95786 925 aaKnown RBP23.47■■□□□ 1.35
CCDC47-202ENST00000403162 LIG1P18858 919 aa23.47■■□□□ 1.35
CCDC47-202ENST00000403162 RXRBP28702 533 aa23.47■■□□□ 1.35
CCDC47-202ENST00000403162 TYRO3Q06418 890 aa23.47■■□□□ 1.35
CCDC47-202ENST00000403162 CCDC94Q9BW85 323 aaPredicted RBP23.47■■□□□ 1.35
CCDC47-202ENST00000403162 UBR2Q8IWV8 1755 aa23.46■■□□□ 1.35
CCDC47-202ENST00000403162 TOB2Q14106 344 aaPredicted RBP23.46■■□□□ 1.35
CCDC47-202ENST00000403162 ZNF710Q8N1W2 664 aa23.46■■□□□ 1.35
CCDC47-202ENST00000403162 FSD1Q9BTV5 496 aa23.46■■□□□ 1.35
CCDC47-202ENST00000403162 CCDC8Q9H0W5 538 aaPredicted RBP23.46■■□□□ 1.35
CCDC47-202ENST00000403162 PYCARDQ9ULZ3 195 aa23.46■■□□□ 1.35
CCDC47-202ENST00000403162 KIF3AQ9Y496 699 aa23.46■■□□□ 1.35
CCDC47-202ENST00000403162 COL9A3Q14050 684 aaPredicted RBP23.45■■□□□ 1.35
CCDC47-202ENST00000403162 FERMT3Q86UX7 667 aa23.45■■□□□ 1.35
CCDC47-202ENST00000403162 TLR7Q9NYK1 1049 aaKnown RBP23.45■■□□□ 1.35
CCDC47-202ENST00000403162 C5P01031 1676 aa23.45■■□□□ 1.34
CCDC47-202ENST00000403162 RBM43Q6ZSC3 357 aaKnown RBP23.45■■□□□ 1.34
CCDC47-202ENST00000403162 DDX21Q9NR30 783 aaKnown RBP eCLIP23.45■■□□□ 1.34
CCDC47-202ENST00000403162 DDX19AQ9NUU7 478 aaKnown RBP23.45■■□□□ 1.34
CCDC47-202ENST00000403162 KRT27Q7Z3Y8 459 aa23.44■■□□□ 1.34
CCDC47-202ENST00000403162 SMAP1Q8IYB5 467 aaPredicted RBP23.44■■□□□ 1.34
CCDC47-202ENST00000403162 BOLA2Q9H3K6 86 aa23.44■■□□□ 1.34
CCDC47-202ENST00000403162 USP16Q9Y5T5 823 aa23.44■■□□□ 1.34
CCDC47-202ENST00000403162 SPC24Q8NBT2 197 aa23.43■■□□□ 1.34
CCDC47-202ENST00000403162 SPATA32Q96LK8 384 aa23.43■■□□□ 1.34
CCDC47-202ENST00000403162 TNMDQ9H2S6 317 aa23.43■■□□□ 1.34
CCDC47-202ENST00000403162 USPL1Q5W0Q7 1092 aa23.42■■□□□ 1.34
CCDC47-202ENST00000403162 FAM173BQ6P4H8 233 aa23.42■■□□□ 1.34
CCDC47-202ENST00000403162 POTEAQ6S8J7 498 aa23.42■■□□□ 1.34
CCDC47-202ENST00000403162 DACT1Q9NYF0 836 aa23.42■■□□□ 1.34
CCDC47-202ENST00000403162 LEO1Q8WVC0 666 aaPredicted RBP23.42■■□□□ 1.34
CCDC47-202ENST00000403162 JARID2Q92833 1246 aaPredicted RBP23.42■■□□□ 1.34
CCDC47-202ENST00000403162 KRT32Q14532 448 aa23.41■■□□□ 1.34
CCDC47-202ENST00000403162 CAMK4Q16566 473 aa23.41■■□□□ 1.34
CCDC47-202ENST00000403162 CLSTN2Q9H4D0 955 aa23.41■■□□□ 1.34
CCDC47-202ENST00000403162 TAF6LQ9Y6J9 622 aa23.41■■□□□ 1.34
CCDC47-202ENST00000403162 BRWD3Q6RI45 1802 aa23.41■■□□□ 1.34
CCDC47-202ENST00000403162 GOLGA6L4A6NEF3 574 aa23.41■■□□□ 1.34
CCDC47-202ENST00000403162 CHAF1AQ13111 956 aaPredicted RBP23.41■■□□□ 1.34
CCDC47-202ENST00000403162 ZNF589Q86UQ0 364 aaPredicted RBP23.41■■□□□ 1.34
CCDC47-202ENST00000403162 TAF5LO75529 589 aa23.4■■□□□ 1.34
CCDC47-202ENST00000403162 PDIA6Q15084 440 aa23.4■■□□□ 1.34
CCDC47-202ENST00000403162 TSC1Q92574 1164 aa23.4■■□□□ 1.34
CCDC47-202ENST00000403162 TCEANC2Q96MN5 208 aa23.4■■□□□ 1.34
CCDC47-202ENST00000403162 CBX8Q9HC52 389 aa23.4■■□□□ 1.34
CCDC47-202ENST00000403162 CHMP3Q9Y3E7 222 aa23.4■■□□□ 1.34
CCDC47-202ENST00000403162 IGKV5-2P06315 115 aa23.4■■□□□ 1.34
CCDC47-202ENST00000403162 PTF1AQ7RTS3 328 aa23.4■■□□□ 1.34
CCDC47-202ENST00000403162 LUZP1Q86V48 1076 aa23.4■■□□□ 1.34
CCDC47-202ENST00000403162 RFX7Q2KHR2 1363 aa23.4■■□□□ 1.34
CCDC47-202ENST00000403162 ANO6Q4KMQ2 910 aa23.39■■□□□ 1.33
CCDC47-202ENST00000403162 SIL1Q9H173 461 aa23.39■■□□□ 1.33
CCDC47-202ENST00000403162 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.38■■□□□ 1.33
CCDC47-202ENST00000403162 ILDR1Q86SU0 546 aaPredicted RBP23.38■■□□□ 1.33
CCDC47-202ENST00000403162 CKAP2LQ8IYA6 745 aa23.38■■□□□ 1.33
CCDC47-202ENST00000403162 TDRD7Q8NHU6 1098 aaKnown RBP23.38■■□□□ 1.33
CCDC47-202ENST00000403162 GTF3C6Q969F1 213 aa23.38■■□□□ 1.33
CCDC47-202ENST00000403162 TFIP11Q9UBB9 837 aaKnown RBP23.38■■□□□ 1.33
CCDC47-202ENST00000403162 PTGS1P23219 599 aa23.37■■□□□ 1.33
CCDC47-202ENST00000403162 PLA2G4DQ86XP0 818 aa23.37■■□□□ 1.33
CCDC47-202ENST00000403162 SMARCC1Q92922 1105 aaPredicted RBP23.37■■□□□ 1.33
CCDC47-202ENST00000403162 BCL2L12Q9HB09 334 aa23.37■■□□□ 1.33
CCDC47-202ENST00000403162 PALLDQ8WX93 1383 aa23.37■■□□□ 1.33
CCDC47-202ENST00000403162 ATP5JP18859 108 aa23.37■■□□□ 1.33
CCDC47-202ENST00000403162 AIMP1Q12904 312 aaKnown RBP23.37■■□□□ 1.33
CCDC47-202ENST00000403162 FAM196AQ6ZSG2 479 aa23.37■■□□□ 1.33
CCDC47-202ENST00000403162 DNAJC10Q8IXB1 793 aa23.37■■□□□ 1.33
CCDC47-202ENST00000403162 LAMB4A4D0S4 1761 aa23.37■■□□□ 1.33
CCDC47-202ENST00000403162 NHSQ6T4R5 1651 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms