RNA–Protein interactions for RNA: ENST00000399606.5

CACNA1C-210, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-210ENST00000399606 NKTRP30414 1462 aaKnown RBP12.53□□□□□ -0.4
CACNA1C-210ENST00000399606 DNMBPQ6XZF7 1577 aa12.53□□□□□ -0.4
CACNA1C-210ENST00000399606 SPDYE3A6NKU9 549 aa12.53□□□□□ -0.4
CACNA1C-210ENST00000399606 ARHGAP29Q52LW3 1261 aa12.53□□□□□ -0.4
CACNA1C-210ENST00000399606 POLA1P09884 1462 aaPredicted RBP12.52□□□□□ -0.4
CACNA1C-210ENST00000399606 CASTP20810 708 aaKnown RBP12.52□□□□□ -0.4
CACNA1C-210ENST00000399606 AMPD3Q01432 767 aa12.52□□□□□ -0.4
CACNA1C-210ENST00000399606 HS1BP3Q53T59 392 aa12.52□□□□□ -0.4
CACNA1C-210ENST00000399606 GADL1Q6ZQY3 521 aa12.52□□□□□ -0.4
CACNA1C-210ENST00000399606 GCC1Q96CN9 775 aa12.52□□□□□ -0.41
CACNA1C-210ENST00000399606 RXRBP28702 533 aa12.52□□□□□ -0.41
CACNA1C-210ENST00000399606 USP37Q86T82 979 aa12.52□□□□□ -0.41
CACNA1C-210ENST00000399606 PAGR1Q9BTK6 254 aa12.52□□□□□ -0.41
CACNA1C-210ENST00000399606 UPF3BQ9BZI7 483 aaKnown RBP12.52□□□□□ -0.41
CACNA1C-210ENST00000399606 C6orf50Q9HD87 102 aa12.52□□□□□ -0.41
CACNA1C-210ENST00000399606 SATB1Q01826 763 aa12.52□□□□□ -0.41
CACNA1C-210ENST00000399606 NAA16Q6N069 864 aaPredicted RBP12.52□□□□□ -0.41
CACNA1C-210ENST00000399606 NME9Q86XW9 330 aa12.52□□□□□ -0.41
CACNA1C-210ENST00000399606 GOLIM4O00461 696 aa12.52□□□□□ -0.41
CACNA1C-210ENST00000399606 TROQ12816 1431 aaPredicted RBP12.51□□□□□ -0.41
CACNA1C-210ENST00000399606 KRT13P13646 458 aa12.51□□□□□ -0.41
CACNA1C-210ENST00000399606 PAIP2Q9BPZ3 127 aaKnown RBP12.51□□□□□ -0.41
CACNA1C-210ENST00000399606 PDCL2Q8N4E4 241 aa12.51□□□□□ -0.41
CACNA1C-210ENST00000399606 PPP1R14CQ8TAE6 165 aa12.51□□□□□ -0.41
CACNA1C-210ENST00000399606 RPGRIP1LQ68CZ1 1315 aa12.51□□□□□ -0.41
CACNA1C-210ENST00000399606 MTIF2P46199 727 aaKnown RBP12.51□□□□□ -0.41
CACNA1C-210ENST00000399606 GOLGA1Q92805 767 aa12.51□□□□□ -0.41
CACNA1C-210ENST00000399606 PDZRN3Q9UPQ7 1066 aa12.51□□□□□ -0.41
CACNA1C-210ENST00000399606 IL2RBP14784 551 aa12.51□□□□□ -0.41
CACNA1C-210ENST00000399606 UBXN4Q92575 508 aa12.51□□□□□ -0.41
CACNA1C-210ENST00000399606 SH2D4AQ9H788 454 aa12.51□□□□□ -0.41
CACNA1C-210ENST00000399606 UFL1O94874 794 aa12.5□□□□□ -0.41
CACNA1C-210ENST00000399606 SUPT20HQ8NEM7 779 aa12.5□□□□□ -0.41
CACNA1C-210ENST00000399606 RPUSD2Q8IZ73 545 aaKnown RBP12.5□□□□□ -0.41
CACNA1C-210ENST00000399606 FAM193BQ96PV7 902 aaPredicted RBP12.5□□□□□ -0.41
CACNA1C-210ENST00000399606 ARHGEF12Q9NZN5 1544 aa12.5□□□□□ -0.41
CACNA1C-210ENST00000399606 FAM13AO94988 1023 aa12.5□□□□□ -0.41
CACNA1C-210ENST00000399606 SNRPA1P09661 255 aaKnown RBP12.5□□□□□ -0.41
CACNA1C-210ENST00000399606 MXRA7P84157 204 aa12.5□□□□□ -0.41
CACNA1C-210ENST00000399606 TBC1D5Q92609 795 aa12.5□□□□□ -0.41
CACNA1C-210ENST00000399606 NUP62CLQ9H1M0 184 aa12.5□□□□□ -0.41
CACNA1C-210ENST00000399606 SLC4A4Q9Y6R1 1079 aa12.5□□□□□ -0.41
CACNA1C-210ENST00000399606 PTPDC1A2A3K4 754 aa12.5□□□□□ -0.41
CACNA1C-210ENST00000399606 PDE6BP35913 854 aa12.5□□□□□ -0.41
CACNA1C-210ENST00000399606 RAB11FIP4Q86YS3 637 aa12.5□□□□□ -0.41
CACNA1C-210ENST00000399606 SAP30BPQ9UHR5 308 aaKnown RBP12.5□□□□□ -0.41
CACNA1C-210ENST00000399606 STK24Q9Y6E0 443 aa12.5□□□□□ -0.41
CACNA1C-210ENST00000399606 ABL1P00519 1130 aa12.49□□□□□ -0.41
CACNA1C-210ENST00000399606 CHST3Q7LGC8 479 aa12.49□□□□□ -0.41
CACNA1C-210ENST00000399606 LUZP1Q86V48 1076 aa12.49□□□□□ -0.41
CACNA1C-210ENST00000399606 KIF1BPQ96EK5 621 aa12.49□□□□□ -0.41
CACNA1C-210ENST00000399606 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.49□□□□□ -0.41
CACNA1C-210ENST00000399606 NR1I2O75469 434 aa12.49□□□□□ -0.41
CACNA1C-210ENST00000399606 IFT140Q96RY7 1462 aa12.49□□□□□ -0.41
CACNA1C-210ENST00000399606 ZMYM4Q5VZL5 1548 aa12.49□□□□□ -0.41
CACNA1C-210ENST00000399606 HAND2P61296 217 aa12.49□□□□□ -0.41
CACNA1C-210ENST00000399606 IFIT1BQ5T764 474 aaKnown RBP12.49□□□□□ -0.41
CACNA1C-210ENST00000399606 DPP8Q6V1X1 898 aaPredicted RBP12.49□□□□□ -0.41
CACNA1C-210ENST00000399606 EXOC6BQ9Y2D4 811 aa12.49□□□□□ -0.41
CACNA1C-210ENST00000399606 PARD3Q8TEW0 1356 aa12.49□□□□□ -0.41
CACNA1C-210ENST00000399606 CAPN15O75808 1086 aa12.49□□□□□ -0.41
CACNA1C-210ENST00000399606 UGGT2Q9NYU1 1516 aa12.49□□□□□ -0.41
CACNA1C-210ENST00000399606 C8orf76Q96K31 380 aa12.49□□□□□ -0.41
CACNA1C-210ENST00000399606 FAM107BQ9H098 131 aa12.49□□□□□ -0.41
CACNA1C-210ENST00000399606 IKBKGQ9Y6K9 419 aa12.49□□□□□ -0.41
CACNA1C-210ENST00000399606 UQCRFS1P1P0C7P4 283 aa12.48□□□□□ -0.41
CACNA1C-210ENST00000399606 SREK1Q8WXA9 508 aaKnown RBP12.48□□□□□ -0.41
CACNA1C-210ENST00000399606 DACT3Q96B18 629 aaPredicted RBP12.48□□□□□ -0.41
CACNA1C-210ENST00000399606 IRAK4Q9NWZ3 460 aa12.48□□□□□ -0.41
CACNA1C-210ENST00000399606 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.48□□□□□ -0.41
CACNA1C-210ENST00000399606 KIF5CO60282 957 aa12.48□□□□□ -0.41
CACNA1C-210ENST00000399606 MYCLP12524 364 aaPredicted RBP12.48□□□□□ -0.41
CACNA1C-210ENST00000399606 UBE3BQ7Z3V4 1068 aa12.48□□□□□ -0.41
CACNA1C-210ENST00000399606 SULF1Q8IWU6 871 aa12.48□□□□□ -0.41
CACNA1C-210ENST00000399606 TNPO1Q92973 898 aaKnown RBP12.48□□□□□ -0.41
CACNA1C-210ENST00000399606 WHAMMQ8TF30 809 aa12.48□□□□□ -0.41
CACNA1C-210ENST00000399606 SLC8A3P57103 927 aa12.48□□□□□ -0.41
CACNA1C-210ENST00000399606 PDE1CQ14123 709 aaPredicted RBP12.48□□□□□ -0.41
CACNA1C-210ENST00000399606 C6orf163Q5TEZ5 329 aa12.48□□□□□ -0.41
CACNA1C-210ENST00000399606 PPIP5K2O43314 1243 aa12.48□□□□□ -0.41
CACNA1C-210ENST00000399606 GAS8O95995 478 aa12.48□□□□□ -0.41
CACNA1C-210ENST00000399606 XRCC6P12956 609 aaKnown RBP eCLIP12.48□□□□□ -0.41
CACNA1C-210ENST00000399606 K7ELQ4 463 aaPredicted RBP12.47□□□□□ -0.41
CACNA1C-210ENST00000399606 ZSCAN12O43309 604 aa12.47□□□□□ -0.41
CACNA1C-210ENST00000399606 NAPAP54920 295 aa12.47□□□□□ -0.41
CACNA1C-210ENST00000399606 DNAAF4Q8WXU2 420 aa12.47□□□□□ -0.41
CACNA1C-210ENST00000399606 THUMPD2Q9BTF0 503 aaKnown RBP12.47□□□□□ -0.41
CACNA1C-210ENST00000399606 CCT2P78371 535 aaKnown RBP12.47□□□□□ -0.41
CACNA1C-210ENST00000399606 LDHBP07195 334 aaKnown RBP12.47□□□□□ -0.41
CACNA1C-210ENST00000399606 CFAP100Q494V2 611 aa12.47□□□□□ -0.41
CACNA1C-210ENST00000399606 PRPF40BQ6NWY9 871 aaKnown RBP12.47□□□□□ -0.41
CACNA1C-210ENST00000399606 LRRC43Q8N309 656 aa12.47□□□□□ -0.41
CACNA1C-210ENST00000399606 SEPT8Q92599 483 aa12.47□□□□□ -0.41
CACNA1C-210ENST00000399606 GTPBP4Q9BZE4 634 aaKnown RBP12.47□□□□□ -0.41
CACNA1C-210ENST00000399606 DBF4Q9UBU7 674 aaPredicted RBP12.47□□□□□ -0.41
CACNA1C-210ENST00000399606 MKRN3Q13064 507 aaKnown RBP12.47□□□□□ -0.41
CACNA1C-210ENST00000399606 FNBP4Q8N3X1 1017 aaPredicted RBP12.47□□□□□ -0.41
CACNA1C-210ENST00000399606 GSDMBQ8TAX9 411 aa12.47□□□□□ -0.41
CACNA1C-210ENST00000399606 ARHGEF10LQ9HCE6 1279 aa12.47□□□□□ -0.41
CACNA1C-210ENST00000399606 EEF2P13639 858 aaKnown RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms