RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 COG6Q9Y2V7 657 aa22.07■■□□□ 1.12
CTNS-203ENST00000399306 SPEF2Q9C093 1822 aa22.07■■□□□ 1.12
CTNS-203ENST00000399306 XDHP47989 1333 aa22.06■■□□□ 1.12
CTNS-203ENST00000399306 RASSF7Q02833 373 aa22.06■■□□□ 1.12
CTNS-203ENST00000399306 LDHAL6AQ6ZMR3 332 aa22.06■■□□□ 1.12
CTNS-203ENST00000399306 DUOX1Q9NRD9 1551 aa22.05■■□□□ 1.12
CTNS-203ENST00000399306 RFX5P48382 616 aaPredicted RBP22.05■■□□□ 1.12
CTNS-203ENST00000399306 ZBTB40Q9NUA8 1239 aa22.05■■□□□ 1.12
CTNS-203ENST00000399306 ATP2B4P23634 1241 aa22.04■■□□□ 1.12
CTNS-203ENST00000399306 IARSP41252 1262 aaKnown RBP22.04■■□□□ 1.12
CTNS-203ENST00000399306 GPSM2P81274 684 aa22.04■■□□□ 1.12
CTNS-203ENST00000399306 C20orf194Q5TEA3 1177 aa22.04■■□□□ 1.12
CTNS-203ENST00000399306 EYA3Q99504 573 aa22.04■■□□□ 1.12
CTNS-203ENST00000399306 COPRSQ9NQ92 184 aa22.04■■□□□ 1.12
CTNS-203ENST00000399306 NSFL1CQ9UNZ2 370 aaKnown RBP22.04■■□□□ 1.12
CTNS-203ENST00000399306 LEMD3Q9Y2U8 911 aa22.04■■□□□ 1.12
CTNS-203ENST00000399306 ATP8B2P98198 1209 aa22.03■■□□□ 1.12
CTNS-203ENST00000399306 PTPN12Q05209 780 aaKnown RBP22.03■■□□□ 1.12
CTNS-203ENST00000399306 C9orf131Q5VYM1 1079 aa22.03■■□□□ 1.12
CTNS-203ENST00000399306 ANKIB1Q9P2G1 1089 aa22.03■■□□□ 1.12
CTNS-203ENST00000399306 GGA1Q9UJY5 639 aa22.03■■□□□ 1.12
CTNS-203ENST00000399306 SRGAP3O43295 1099 aa22.02■■□□□ 1.12
CTNS-203ENST00000399306 CIAO1O76071 339 aa22.02■■□□□ 1.12
CTNS-203ENST00000399306 PRELPP51888 382 aa22.02■■□□□ 1.12
CTNS-203ENST00000399306 KIAA2012Q0VF49 1180 aa22.02■■□□□ 1.12
CTNS-203ENST00000399306 AAMPQ13685 434 aa22.02■■□□□ 1.12
CTNS-203ENST00000399306 TBC1D16Q8TBP0 767 aa22.02■■□□□ 1.12
CTNS-203ENST00000399306 CNNM1Q9NRU3 951 aa22.02■■□□□ 1.12
CTNS-203ENST00000399306 RNF181Q9P0P0 153 aa22.02■■□□□ 1.12
CTNS-203ENST00000399306 RIPOR2Q9Y4F9 1068 aa22.02■■□□□ 1.12
CTNS-203ENST00000399306 MROH5Q6ZUA9 1318 aa22.02■■□□□ 1.12
CTNS-203ENST00000399306 A0A1B0GUL6 1792 aa22.02■■□□□ 1.11
CTNS-203ENST00000399306 CHRNDQ07001 517 aa22.01■■□□□ 1.11
CTNS-203ENST00000399306 SSH3Q8TE77 659 aa22.01■■□□□ 1.11
CTNS-203ENST00000399306 ZNF594Q96JF6 807 aaPredicted RBP22.01■■□□□ 1.11
CTNS-203ENST00000399306 ZNF277Q9NRM2 450 aaPredicted RBP22.01■■□□□ 1.11
CTNS-203ENST00000399306 EYA2O00167 538 aa22■■□□□ 1.11
CTNS-203ENST00000399306 RPAP2Q8IXW5 612 aaPredicted RBP22■■□□□ 1.11
CTNS-203ENST00000399306 POLLQ9UGP5 575 aa22■■□□□ 1.11
CTNS-203ENST00000399306 POLA2Q14181 598 aa21.99■■□□□ 1.11
CTNS-203ENST00000399306 C15orf52Q6ZUT6 534 aaKnown RBP21.99■■□□□ 1.11
CTNS-203ENST00000399306 SLC51AQ86UW1 340 aa21.99■■□□□ 1.11
CTNS-203ENST00000399306 MED23Q9ULK4 1368 aa21.99■■□□□ 1.11
CTNS-203ENST00000399306 TIAM2Q8IVF5 1701 aa21.98■■□□□ 1.11
CTNS-203ENST00000399306 C6orf229H3BNL8 230 aa21.98■■□□□ 1.11
CTNS-203ENST00000399306 PPIP5K2O43314 1243 aa21.98■■□□□ 1.11
CTNS-203ENST00000399306 UFL1O94874 794 aa21.98■■□□□ 1.11
CTNS-203ENST00000399306 WASHC4Q2M389 1173 aa21.98■■□□□ 1.11
CTNS-203ENST00000399306 CEP85Q6P2H3 762 aa21.98■■□□□ 1.11
CTNS-203ENST00000399306 LARGE2Q8N3Y3 721 aa21.98■■□□□ 1.11
CTNS-203ENST00000399306 JDP2Q8WYK2 163 aa21.98■■□□□ 1.11
CTNS-203ENST00000399306 PNMA6EA0A0J9YXQ4 647 aa21.97■■□□□ 1.11
CTNS-203ENST00000399306 IL15P40933 162 aaPredicted RBP21.97■■□□□ 1.11
CTNS-203ENST00000399306 UBE4AQ14139 1066 aa21.97■■□□□ 1.11
CTNS-203ENST00000399306 PUS3Q9BZE2 481 aaKnown RBP21.97■■□□□ 1.11
CTNS-203ENST00000399306 ZC3H12CQ9C0D7 883 aaKnown RBP21.97■■□□□ 1.11
CTNS-203ENST00000399306 ZNF804BA4D1E1 1349 aa21.97■■□□□ 1.11
CTNS-203ENST00000399306 FZD9O00144 591 aa21.96■■□□□ 1.11
CTNS-203ENST00000399306 SUPT16HQ9Y5B9 1047 aaKnown RBP21.96■■□□□ 1.11
CTNS-203ENST00000399306 PDE8BO95263 885 aa21.95■■□□□ 1.1
CTNS-203ENST00000399306 AOC3Q16853 763 aa21.95■■□□□ 1.1
CTNS-203ENST00000399306 LRRC24Q50LG9 513 aa21.95■■□□□ 1.1
CTNS-203ENST00000399306 ATG9AQ7Z3C6 839 aa21.95■■□□□ 1.1
CTNS-203ENST00000399306 VGLL2Q8N8G2 317 aa21.95■■□□□ 1.1
CTNS-203ENST00000399306 KLHDC4Q8TBB5 520 aa21.95■■□□□ 1.1
CTNS-203ENST00000399306 C1orf115Q9H7X2 142 aa21.95■■□□□ 1.1
CTNS-203ENST00000399306 NOP58Q9Y2X3 529 aaKnown RBP21.95■■□□□ 1.1
CTNS-203ENST00000399306 HMMRO75330 724 aa21.94■■□□□ 1.1
CTNS-203ENST00000399306 YY1P25490 414 aa21.94■■□□□ 1.1
CTNS-203ENST00000399306 METTL24Q5JXM2 366 aa21.94■■□□□ 1.1
CTNS-203ENST00000399306 NIM1KQ8IY84 436 aa21.94■■□□□ 1.1
CTNS-203ENST00000399306 KCNJ4P48050 445 aa21.93■■□□□ 1.1
CTNS-203ENST00000399306 ZNRF3Q9ULT6 936 aa21.93■■□□□ 1.1
CTNS-203ENST00000399306 COL4A5P29400 1685 aa21.92■■□□□ 1.1
CTNS-203ENST00000399306 IRS2Q9Y4H2 1338 aa21.92■■□□□ 1.1
CTNS-203ENST00000399306 DPY19L2Q6NUT2 758 aa21.92■■□□□ 1.1
CTNS-203ENST00000399306 CEP126Q9P2H0 1117 aa21.92■■□□□ 1.1
CTNS-203ENST00000399306 PA2G4Q9UQ80 394 aaKnown RBP21.92■■□□□ 1.1
CTNS-203ENST00000399306 GLTPD2A6NH11 291 aa21.91■■□□□ 1.1
CTNS-203ENST00000399306 G3BP1Q13283 466 aaKnown RBP eCLIP21.91■■□□□ 1.1
CTNS-203ENST00000399306 PUM3Q15397 648 aaKnown RBP21.91■■□□□ 1.1
CTNS-203ENST00000399306 PODNQ7Z5L7 613 aa21.91■■□□□ 1.1
CTNS-203ENST00000399306 HELBQ8NG08 1087 aaPredicted RBP21.91■■□□□ 1.1
CTNS-203ENST00000399306 COA1Q9GZY4 146 aa21.91■■□□□ 1.1
CTNS-203ENST00000399306 TAF5LO75529 589 aa21.9■■□□□ 1.1
CTNS-203ENST00000399306 FGFR2P21802 821 aa21.9■■□□□ 1.1
CTNS-203ENST00000399306 EIF6P56537 245 aaKnown RBP21.9■■□□□ 1.1
CTNS-203ENST00000399306 HSP90AB4PQ58FF6 505 aa21.9■■□□□ 1.1
CTNS-203ENST00000399306 CRBNQ96SW2 442 aa21.9■■□□□ 1.1
CTNS-203ENST00000399306 SIL1Q9H173 461 aa21.9■■□□□ 1.1
CTNS-203ENST00000399306 KDM2BQ8NHM5 1336 aa21.89■■□□□ 1.1
CTNS-203ENST00000399306 ZBTB22O15209 634 aa21.89■■□□□ 1.09
CTNS-203ENST00000399306 PSME4Q14997 1843 aa21.89■■□□□ 1.09
CTNS-203ENST00000399306 ERC1Q8IUD2 1116 aa21.88■■□□□ 1.09
CTNS-203ENST00000399306 SIRT2Q8IXJ6 389 aa21.88■■□□□ 1.09
CTNS-203ENST00000399306 GPC2Q8N158 579 aa21.88■■□□□ 1.09
CTNS-203ENST00000399306 LPIN2Q92539 896 aa21.88■■□□□ 1.09
CTNS-203ENST00000399306 GPR108Q9NPR9 543 aa21.88■■□□□ 1.09
CTNS-203ENST00000399306 AKAP2Q9Y2D5 859 aa21.88■■□□□ 1.09
CTNS-203ENST00000399306 G3V3G9 751 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms