RNA–Protein interactions for RNA: ENST00000399027.3

CYCSP55-201, Transcript of cytochrome c, somatic pseudogene 55, humanhuman

BASIC

Gene CYCSP55, Length 311 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYCSP55-201ENST00000399027 C20orf194Q5TEA3 1177 aa13.09□□□□□ -0.31
CYCSP55-201ENST00000399027 TMX4Q9H1E5 349 aaPredicted RBP13.09□□□□□ -0.31
CYCSP55-201ENST00000399027 PODXL2Q9NZ53 605 aa13.09□□□□□ -0.31
CYCSP55-201ENST00000399027 DDX19BQ9UMR2 479 aa13.09□□□□□ -0.31
CYCSP55-201ENST00000399027 CHMP3Q9Y3E7 222 aa13.09□□□□□ -0.31
CYCSP55-201ENST00000399027 GNAI2P04899 355 aa13.08□□□□□ -0.32
CYCSP55-201ENST00000399027 LMNB1P20700 586 aa13.08□□□□□ -0.32
CYCSP55-201ENST00000399027 RFX5P48382 616 aaPredicted RBP13.08□□□□□ -0.32
CYCSP55-201ENST00000399027 MPNDQ8N594 471 aa13.08□□□□□ -0.32
CYCSP55-201ENST00000399027 COG6Q9Y2V7 657 aa13.08□□□□□ -0.32
CYCSP55-201ENST00000399027 ZNF646O15015 1829 aaPredicted RBP13.08□□□□□ -0.32
CYCSP55-201ENST00000399027 COL4A5P29400 1685 aa13.08□□□□□ -0.32
CYCSP55-201ENST00000399027 GPSM2P81274 684 aa13.07□□□□□ -0.32
CYCSP55-201ENST00000399027 DPP8Q6V1X1 898 aaPredicted RBP13.07□□□□□ -0.32
CYCSP55-201ENST00000399027 MPHOSPH8Q99549 860 aa13.07□□□□□ -0.32
CYCSP55-201ENST00000399027 VPS33BQ9H267 617 aa13.07□□□□□ -0.32
CYCSP55-201ENST00000399027 MINPP1Q9UNW1 487 aa13.07□□□□□ -0.32
CYCSP55-201ENST00000399027 ARAP2Q8WZ64 1704 aa13.07□□□□□ -0.32
CYCSP55-201ENST00000399027 SUPT20HQ8NEM7 779 aa13.06□□□□□ -0.32
CYCSP55-201ENST00000399027 ZNF594Q96JF6 807 aaPredicted RBP13.06□□□□□ -0.32
CYCSP55-201ENST00000399027 CHMP4BQ9H444 224 aaKnown RBP13.06□□□□□ -0.32
CYCSP55-201ENST00000399027 XDHP47989 1333 aa13.06□□□□□ -0.32
CYCSP55-201ENST00000399027 ZC3H4Q9UPT8 1303 aaKnown RBP13.06□□□□□ -0.32
CYCSP55-201ENST00000399027 IARSP41252 1262 aaKnown RBP13.05□□□□□ -0.32
CYCSP55-201ENST00000399027 PTPN12Q05209 780 aaKnown RBP13.05□□□□□ -0.32
CYCSP55-201ENST00000399027 TAF7LQ5H9L4 462 aa13.05□□□□□ -0.32
CYCSP55-201ENST00000399027 C9orf131Q5VYM1 1079 aa13.05□□□□□ -0.32
CYCSP55-201ENST00000399027 LDHAL6AQ6ZMR3 332 aa13.05□□□□□ -0.32
CYCSP55-201ENST00000399027 ZBTB40Q9NUA8 1239 aa13.05□□□□□ -0.32
CYCSP55-201ENST00000399027 RNF181Q9P0P0 153 aa13.05□□□□□ -0.32
CYCSP55-201ENST00000399027 FBXO3Q9UK99 471 aa13.05□□□□□ -0.32
CYCSP55-201ENST00000399027 NSFL1CQ9UNZ2 370 aaKnown RBP13.05□□□□□ -0.32
CYCSP55-201ENST00000399027 CHRNDQ07001 517 aa13.04□□□□□ -0.32
CYCSP55-201ENST00000399027 TBC1D16Q8TBP0 767 aa13.04□□□□□ -0.32
CYCSP55-201ENST00000399027 ANKRD2Q9GZV1 360 aa13.04□□□□□ -0.32
CYCSP55-201ENST00000399027 COPRSQ9NQ92 184 aa13.04□□□□□ -0.32
CYCSP55-201ENST00000399027 ZNF277Q9NRM2 450 aaPredicted RBP13.04□□□□□ -0.32
CYCSP55-201ENST00000399027 POLLQ9UGP5 575 aa13.04□□□□□ -0.32
CYCSP55-201ENST00000399027 RIPOR2Q9Y4F9 1068 aa13.04□□□□□ -0.32
CYCSP55-201ENST00000399027 MYH13Q9UKX3 1938 aa13.03□□□□□ -0.32
CYCSP55-201ENST00000399027 SCN9AQ15858 1988 aa13.03□□□□□ -0.32
CYCSP55-201ENST00000399027 WDR90Q96KV7 1748 aa13.03□□□□□ -0.32
CYCSP55-201ENST00000399027 PNMA6EA0A0J9YXQ4 647 aa13.03□□□□□ -0.32
CYCSP55-201ENST00000399027 SRGAP3O43295 1099 aa13.03□□□□□ -0.32
CYCSP55-201ENST00000399027 ATP2B4P23634 1241 aa13.03□□□□□ -0.32
CYCSP55-201ENST00000399027 HOXD11P31277 338 aaPredicted RBP13.03□□□□□ -0.32
CYCSP55-201ENST00000399027 ATP8B2P98198 1209 aa13.03□□□□□ -0.32
CYCSP55-201ENST00000399027 KIAA2012Q0VF49 1180 aa13.03□□□□□ -0.32
CYCSP55-201ENST00000399027 POLA2Q14181 598 aa13.03□□□□□ -0.32
CYCSP55-201ENST00000399027 KLHDC4Q8TBB5 520 aa13.03□□□□□ -0.32
CYCSP55-201ENST00000399027 SSH3Q8TE77 659 aa13.03□□□□□ -0.32
CYCSP55-201ENST00000399027 PUS3Q9BZE2 481 aaKnown RBP13.03□□□□□ -0.32
CYCSP55-201ENST00000399027 C1orf115Q9H7X2 142 aa13.03□□□□□ -0.32
CYCSP55-201ENST00000399027 CNNM1Q9NRU3 951 aa13.03□□□□□ -0.32
CYCSP55-201ENST00000399027 ANKIB1Q9P2G1 1089 aa13.03□□□□□ -0.32
CYCSP55-201ENST00000399027 GGA1Q9UJY5 639 aa13.03□□□□□ -0.32
CYCSP55-201ENST00000399027 LEMD3Q9Y2U8 911 aa13.03□□□□□ -0.32
CYCSP55-201ENST00000399027 MROH5Q6ZUA9 1318 aa13.03□□□□□ -0.32
CYCSP55-201ENST00000399027 EYA2O00167 538 aa13.02□□□□□ -0.33
CYCSP55-201ENST00000399027 CIAO1O76071 339 aa13.02□□□□□ -0.33
CYCSP55-201ENST00000399027 UFL1O94874 794 aa13.02□□□□□ -0.33
CYCSP55-201ENST00000399027 AOC3Q16853 763 aa13.02□□□□□ -0.33
CYCSP55-201ENST00000399027 LRRC24Q50LG9 513 aa13.02□□□□□ -0.33
CYCSP55-201ENST00000399027 CEP85Q6P2H3 762 aa13.02□□□□□ -0.33
CYCSP55-201ENST00000399027 VGLL2Q8N8G2 317 aa13.02□□□□□ -0.33
CYCSP55-201ENST00000399027 EYA3Q99504 573 aa13.02□□□□□ -0.33
CYCSP55-201ENST00000399027 MED23Q9ULK4 1368 aa13.02□□□□□ -0.33
CYCSP55-201ENST00000399027 SCN4AP35499 1836 aa13.02□□□□□ -0.33
CYCSP55-201ENST00000399027 C6orf229H3BNL8 230 aa13.01□□□□□ -0.33
CYCSP55-201ENST00000399027 PPIP5K2O43314 1243 aa13.01□□□□□ -0.33
CYCSP55-201ENST00000399027 WASHC4Q2M389 1173 aa13.01□□□□□ -0.33
CYCSP55-201ENST00000399027 ATG9AQ7Z3C6 839 aa13.01□□□□□ -0.33
CYCSP55-201ENST00000399027 SUPT16HQ9Y5B9 1047 aaKnown RBP13.01□□□□□ -0.33
CYCSP55-201ENST00000399027 ZNF804BA4D1E1 1349 aa13.01□□□□□ -0.33
CYCSP55-201ENST00000399027 IRS2Q9Y4H2 1338 aa13.01□□□□□ -0.33
CYCSP55-201ENST00000399027 FZD9O00144 591 aa13□□□□□ -0.33
CYCSP55-201ENST00000399027 TAF5LO75529 589 aa13□□□□□ -0.33
CYCSP55-201ENST00000399027 YY1P25490 414 aa13□□□□□ -0.33
CYCSP55-201ENST00000399027 C15orf52Q6ZUT6 534 aaKnown RBP13□□□□□ -0.33
CYCSP55-201ENST00000399027 RPAP2Q8IXW5 612 aaPredicted RBP13□□□□□ -0.33
CYCSP55-201ENST00000399027 LARGE2Q8N3Y3 721 aa13□□□□□ -0.33
CYCSP55-201ENST00000399027 JDP2Q8WYK2 163 aa13□□□□□ -0.33
CYCSP55-201ENST00000399027 PA2G4Q9UQ80 394 aaKnown RBP13□□□□□ -0.33
CYCSP55-201ENST00000399027 WTIPA6NIX2 430 aaPredicted RBP12.99□□□□□ -0.33
CYCSP55-201ENST00000399027 PDE8BO95263 885 aa12.99□□□□□ -0.33
CYCSP55-201ENST00000399027 IL15P40933 162 aaPredicted RBP12.99□□□□□ -0.33
CYCSP55-201ENST00000399027 UBE4AQ14139 1066 aa12.99□□□□□ -0.33
CYCSP55-201ENST00000399027 HELBQ8NG08 1087 aaPredicted RBP12.99□□□□□ -0.33
CYCSP55-201ENST00000399027 ZC3H12CQ9C0D7 883 aaKnown RBP12.99□□□□□ -0.33
CYCSP55-201ENST00000399027 METTL24Q5JXM2 366 aa12.98□□□□□ -0.33
CYCSP55-201ENST00000399027 SIRT2Q8IXJ6 389 aa12.98□□□□□ -0.33
CYCSP55-201ENST00000399027 NIM1KQ8IY84 436 aa12.98□□□□□ -0.33
CYCSP55-201ENST00000399027 GPR101Q96P66 508 aaPredicted RBP12.98□□□□□ -0.33
CYCSP55-201ENST00000399027 CRBNQ96SW2 442 aa12.98□□□□□ -0.33
CYCSP55-201ENST00000399027 SIL1Q9H173 461 aa12.98□□□□□ -0.33
CYCSP55-201ENST00000399027 NOP58Q9Y2X3 529 aaKnown RBP12.98□□□□□ -0.33
CYCSP55-201ENST00000399027 GLTPD2A6NH11 291 aa12.97□□□□□ -0.33
CYCSP55-201ENST00000399027 RIMBP2O15034 1052 aa12.97□□□□□ -0.33
CYCSP55-201ENST00000399027 FGFR2P21802 821 aa12.97□□□□□ -0.33
CYCSP55-201ENST00000399027 KCNJ4P48050 445 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms