RNA–Protein interactions for RNA: ENST00000398793.6

TOP3B-202, Transcript of DNA topoisomerase III beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3B, Length 3,107 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-202ENST00000398793 VIRMAQ69YN4 1812 aaKnown RBP15.8■□□□□ 0.12
TOP3B-202ENST00000398793 EYA2O00167 538 aa15.8■□□□□ 0.12
TOP3B-202ENST00000398793 ATG9AQ7Z3C6 839 aa15.8■□□□□ 0.12
TOP3B-202ENST00000398793 PCNTO95613 3336 aa15.8■□□□□ 0.12
TOP3B-202ENST00000398793 LRRC37A3O60309 1634 aa15.8■□□□□ 0.12
TOP3B-202ENST00000398793 UQCRHLA0A096LP55 91 aa15.8■□□□□ 0.12
TOP3B-202ENST00000398793 UQCRHP07919 91 aa15.8■□□□□ 0.12
TOP3B-202ENST00000398793 NFIXQ14938 502 aa15.8■□□□□ 0.12
TOP3B-202ENST00000398793 TTC39AQ5SRH9 613 aa15.8■□□□□ 0.12
TOP3B-202ENST00000398793 PCCAP05165 728 aaPredicted RBP15.79■□□□□ 0.12
TOP3B-202ENST00000398793 GYG1P46976 350 aa15.79■□□□□ 0.12
TOP3B-202ENST00000398793 BCAMP50895 628 aa15.79■□□□□ 0.12
TOP3B-202ENST00000398793 DMTNQ08495 405 aa15.79■□□□□ 0.12
TOP3B-202ENST00000398793 COL9A3Q14050 684 aaPredicted RBP15.79■□□□□ 0.12
TOP3B-202ENST00000398793 ANP32BQ92688 251 aaKnown RBP15.79■□□□□ 0.12
TOP3B-202ENST00000398793 TOGARAM1Q9Y4F4 1720 aa15.79■□□□□ 0.12
TOP3B-202ENST00000398793 IFIT1P09914 478 aaKnown RBP15.79■□□□□ 0.12
TOP3B-202ENST00000398793 KLRK1P26718 216 aa15.79■□□□□ 0.12
TOP3B-202ENST00000398793 HSP90AB4PQ58FF6 505 aa15.79■□□□□ 0.12
TOP3B-202ENST00000398793 ZSCAN30Q86W11 494 aa15.79■□□□□ 0.12
TOP3B-202ENST00000398793 PI4K2BQ8TCG2 481 aa15.79■□□□□ 0.12
TOP3B-202ENST00000398793 VPS37DQ86XT2 251 aa15.79■□□□□ 0.12
TOP3B-202ENST00000398793 GPATCH3Q96I76 525 aa15.79■□□□□ 0.12
TOP3B-202ENST00000398793 ZNF652Q9Y2D9 606 aa15.79■□□□□ 0.12
TOP3B-202ENST00000398793 RAB11FIP3O75154 756 aa15.78■□□□□ 0.12
TOP3B-202ENST00000398793 PHKA1P46020 1223 aa15.78■□□□□ 0.12
TOP3B-202ENST00000398793 PAXIP1Q6ZW49 1069 aaPredicted RBP15.78■□□□□ 0.12
TOP3B-202ENST00000398793 XAGE2Q96GT9 111 aa15.78■□□□□ 0.12
TOP3B-202ENST00000398793 LRRC2Q9BYS8 371 aa15.78■□□□□ 0.12
TOP3B-202ENST00000398793 KDM3BQ7LBC6 1761 aa15.78■□□□□ 0.12
TOP3B-202ENST00000398793 PDE8AO60658 829 aa15.78■□□□□ 0.12
TOP3B-202ENST00000398793 HAND2P61296 217 aa15.78■□□□□ 0.12
TOP3B-202ENST00000398793 ATP2B3Q16720 1220 aa15.78■□□□□ 0.12
TOP3B-202ENST00000398793 ANKIB1Q9P2G1 1089 aa15.78■□□□□ 0.12
TOP3B-202ENST00000398793 A0A0G2JLW4 131 aa15.77■□□□□ 0.12
TOP3B-202ENST00000398793 PSDA5PKW4 1024 aaPredicted RBP15.77■□□□□ 0.12
TOP3B-202ENST00000398793 RPS6KA4O75676 772 aa15.77■□□□□ 0.12
TOP3B-202ENST00000398793 CHMLP26374 656 aa15.77■□□□□ 0.12
TOP3B-202ENST00000398793 PPP4R3BQ5MIZ7 849 aa15.77■□□□□ 0.12
TOP3B-202ENST00000398793 GAS2L3Q86XJ1 694 aa15.77■□□□□ 0.12
TOP3B-202ENST00000398793 RAB11FIP4Q86YS3 637 aa15.77■□□□□ 0.12
TOP3B-202ENST00000398793 CNTROBQ8N137 903 aa15.77■□□□□ 0.12
TOP3B-202ENST00000398793 ZNF622Q969S3 477 aaKnown RBP eCLIP15.77■□□□□ 0.126e-7■□□□□ 11.1
TOP3B-202ENST00000398793 NSFL1CQ9UNZ2 370 aaKnown RBP15.77■□□□□ 0.12
TOP3B-202ENST00000398793 RIMBP2O15034 1052 aa15.77■□□□□ 0.11
TOP3B-202ENST00000398793 ZAP70P43403 619 aa15.77■□□□□ 0.11
TOP3B-202ENST00000398793 NMIQ13287 307 aaPredicted RBP15.77■□□□□ 0.11
TOP3B-202ENST00000398793 A0A0D9SFI3 127 aa15.77■□□□□ 0.11
TOP3B-202ENST00000398793 APPP05067 770 aa15.77■□□□□ 0.11
TOP3B-202ENST00000398793 UTP14CQ5TAP6 766 aaKnown RBP15.77■□□□□ 0.11
TOP3B-202ENST00000398793 CHST3Q7LGC8 479 aa15.77■□□□□ 0.11
TOP3B-202ENST00000398793 ZNF34Q8IZ26 560 aa15.77■□□□□ 0.11
TOP3B-202ENST00000398793 ISY1Q9ULR0 285 aaKnown RBP15.77■□□□□ 0.11
TOP3B-202ENST00000398793 HDAC5Q9UQL6 1122 aa15.77■□□□□ 0.11
TOP3B-202ENST00000398793 MRC1P22897 1456 aa15.76■□□□□ 0.11
TOP3B-202ENST00000398793 IGHMBP2P38935 993 aaKnown RBP15.76■□□□□ 0.11
TOP3B-202ENST00000398793 FOSBP53539 338 aa15.76■□□□□ 0.11
TOP3B-202ENST00000398793 PTH1RQ03431 593 aa15.76■□□□□ 0.11
TOP3B-202ENST00000398793 PRPF40BQ6NWY9 871 aaKnown RBP15.76■□□□□ 0.11
TOP3B-202ENST00000398793 TAF6LQ9Y6J9 622 aa15.76■□□□□ 0.11
TOP3B-202ENST00000398793 DOT1LQ8TEK3 1739 aa15.76■□□□□ 0.11
TOP3B-202ENST00000398793 PARP4Q9UKK3 1724 aaKnown RBP15.76■□□□□ 0.11
TOP3B-202ENST00000398793 VGLL3A8MV65 326 aa15.76■□□□□ 0.11
TOP3B-202ENST00000398793 NEK4P51957 841 aa15.76■□□□□ 0.11
TOP3B-202ENST00000398793 CNBD1Q8NA66 436 aa15.76■□□□□ 0.11
TOP3B-202ENST00000398793 IPO4Q8TEX9 1081 aaKnown RBP15.76■□□□□ 0.11
TOP3B-202ENST00000398793 CHAMP1Q96JM3 812 aa15.76■□□□□ 0.11
TOP3B-202ENST00000398793 TBC1D32Q96NH3 1257 aa15.76■□□□□ 0.11
TOP3B-202ENST00000398793 ATF5Q9Y2D1 282 aaPredicted RBP15.76■□□□□ 0.11
TOP3B-202ENST00000398793 ERC2O15083 957 aa15.75■□□□□ 0.11
TOP3B-202ENST00000398793 GLRX3O76003 335 aaKnown RBP15.75■□□□□ 0.11
TOP3B-202ENST00000398793 ZBTB7AO95365 584 aa15.75■□□□□ 0.11
TOP3B-202ENST00000398793 TERF1P54274 439 aa15.75■□□□□ 0.11
TOP3B-202ENST00000398793 SF3B2Q13435 895 aaKnown RBP15.75■□□□□ 0.11
TOP3B-202ENST00000398793 ZNF589Q86UQ0 364 aaPredicted RBP15.75■□□□□ 0.11
TOP3B-202ENST00000398793 NLRP3Q96P20 1036 aa15.75■□□□□ 0.11
TOP3B-202ENST00000398793 GLI3P10071 1580 aa15.75■□□□□ 0.11
TOP3B-202ENST00000398793 MYH14Q7Z406 1995 aaKnown RBP15.75■□□□□ 0.11
TOP3B-202ENST00000398793 MTERF4Q7Z6M4 381 aaKnown RBP15.75■□□□□ 0.11
TOP3B-202ENST00000398793 ERC1Q8IUD2 1116 aa15.75■□□□□ 0.11
TOP3B-202ENST00000398793 TPTE2Q6XPS3 522 aa15.74■□□□□ 0.11
TOP3B-202ENST00000398793 COL23A1Q86Y22 540 aaPredicted RBP15.74■□□□□ 0.11
TOP3B-202ENST00000398793 PLCD3Q8N3E9 789 aa15.74■□□□□ 0.11
TOP3B-202ENST00000398793 MIGA1Q8NAN2 632 aa15.74■□□□□ 0.11
TOP3B-202ENST00000398793 COPRSQ9NQ92 184 aa15.74■□□□□ 0.11
TOP3B-202ENST00000398793 CHMP5Q9NZZ3 219 aa15.74■□□□□ 0.11
TOP3B-202ENST00000398793 NTSR2O95665 410 aa15.74■□□□□ 0.11
TOP3B-202ENST00000398793 VPS53Q5VIR6 699 aa15.74■□□□□ 0.11
TOP3B-202ENST00000398793 ABCC12Q96J65 1359 aa15.74■□□□□ 0.11
TOP3B-202ENST00000398793 MMP10P09238 476 aa15.74■□□□□ 0.11
TOP3B-202ENST00000398793 ITGB4P16144 1822 aa15.73■□□□□ 0.11
TOP3B-202ENST00000398793 DDX11L8A8MPP1 907 aa15.73■□□□□ 0.11
TOP3B-202ENST00000398793 F8W031 263 aaPredicted RBP15.73■□□□□ 0.11
TOP3B-202ENST00000398793 CCDC152Q4G0S7 254 aa15.73■□□□□ 0.11
TOP3B-202ENST00000398793 ESYT1Q9BSJ8 1104 aa15.73■□□□□ 0.11
TOP3B-202ENST00000398793 SERPINB2P05120 415 aa15.73■□□□□ 0.11
TOP3B-202ENST00000398793 ZSCAN20P17040 1043 aaPredicted RBP15.73■□□□□ 0.11
TOP3B-202ENST00000398793 IL15P40933 162 aaPredicted RBP15.73■□□□□ 0.11
TOP3B-202ENST00000398793 CCDC173Q0VFZ6 552 aa15.73■□□□□ 0.11
TOP3B-202ENST00000398793 NARFQ9UHQ1 456 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms