RNA–Protein interactions for RNA: ENST00000398661.6

HMGCLL1-205, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 2,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-205ENST00000398661 CCDC24Q8N4L8 307 aa11.99□□□□□ -0.49
HMGCLL1-205ENST00000398661 NWD2Q9ULI1 1742 aa11.98□□□□□ -0.49
HMGCLL1-205ENST00000398661 UBTFL1P0CB47 393 aaPredicted RBP11.98□□□□□ -0.49
HMGCLL1-205ENST00000398661 KMT5BQ4FZB7 885 aa11.98□□□□□ -0.49
HMGCLL1-205ENST00000398661 EPHA10Q5JZY3 1008 aa11.98□□□□□ -0.49
HMGCLL1-205ENST00000398661 UBE3BQ7Z3V4 1068 aa11.98□□□□□ -0.49
HMGCLL1-205ENST00000398661 CREBRFQ8IUR6 639 aa11.98□□□□□ -0.49
HMGCLL1-205ENST00000398661 LINC00116Q8NCU8 138 aa11.98□□□□□ -0.49
HMGCLL1-205ENST00000398661 PA2G4Q9UQ80 394 aaKnown RBP11.98□□□□□ -0.49
HMGCLL1-205ENST00000398661 TRIM6-TRIM34B2RNG4 842 aa11.98□□□□□ -0.49
HMGCLL1-205ENST00000398661 MCCP23508 829 aa11.98□□□□□ -0.49
HMGCLL1-205ENST00000398661 CCT4P50991 539 aaKnown RBP11.98□□□□□ -0.49
HMGCLL1-205ENST00000398661 ANKRD44Q8N8A2 993 aa11.98□□□□□ -0.49
HMGCLL1-205ENST00000398661 TRIM34Q9BYJ4 488 aa11.98□□□□□ -0.49
HMGCLL1-205ENST00000398661 STARD3NLO95772 234 aa11.97□□□□□ -0.49
HMGCLL1-205ENST00000398661 CCDC186Q7Z3E2 898 aa11.97□□□□□ -0.49
HMGCLL1-205ENST00000398661 KRT27Q7Z3Y8 459 aa11.97□□□□□ -0.49
HMGCLL1-205ENST00000398661 CHMP4AQ9BY43 222 aa11.97□□□□□ -0.49
HMGCLL1-205ENST00000398661 LRRC4BQ9NT99 713 aa11.97□□□□□ -0.49
HMGCLL1-205ENST00000398661 ATRNO75882 1429 aa11.97□□□□□ -0.49
HMGCLL1-205ENST00000398661 IRX3P78415 501 aaPredicted RBP11.97□□□□□ -0.49
HMGCLL1-205ENST00000398661 LRMPQ12912 555 aa11.97□□□□□ -0.49
HMGCLL1-205ENST00000398661 INTS5Q6P9B9 1019 aaKnown RBP11.97□□□□□ -0.49
HMGCLL1-205ENST00000398661 BICDL1Q6ZP65 573 aa11.97□□□□□ -0.49
HMGCLL1-205ENST00000398661 KAZALD1Q96I82 304 aa11.97□□□□□ -0.49
HMGCLL1-205ENST00000398661 SIL1Q9H173 461 aa11.97□□□□□ -0.49
HMGCLL1-205ENST00000398661 PALD1Q9ULE6 856 aa11.97□□□□□ -0.49
HMGCLL1-205ENST00000398661 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.97□□□□□ -0.49
HMGCLL1-205ENST00000398661 NEURL1BA8MQ27 555 aa11.96□□□□□ -0.49
HMGCLL1-205ENST00000398661 FAM89AQ96GI7 184 aa11.96□□□□□ -0.49
HMGCLL1-205ENST00000398661 SUCLG2Q96I99 432 aa11.96□□□□□ -0.49
HMGCLL1-205ENST00000398661 GNAI2P04899 355 aa11.96□□□□□ -0.5
HMGCLL1-205ENST00000398661 ANAPC15P60006 121 aa11.96□□□□□ -0.5
HMGCLL1-205ENST00000398661 PPP1R42Q7Z4L9 355 aa11.96□□□□□ -0.5
HMGCLL1-205ENST00000398661 IL1RAPL2Q9NP60 686 aa11.96□□□□□ -0.5
HMGCLL1-205ENST00000398661 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.96□□□□□ -0.5
HMGCLL1-205ENST00000398661 ATP10DQ9P241 1426 aa11.95□□□□□ -0.5
HMGCLL1-205ENST00000398661 A0A087WZG4 1122 aa11.95□□□□□ -0.5
HMGCLL1-205ENST00000398661 SRGAP3O43295 1099 aa11.95□□□□□ -0.5
HMGCLL1-205ENST00000398661 CCDC192P0DO97 292 aa11.95□□□□□ -0.5
HMGCLL1-205ENST00000398661 ZSCAN22P10073 491 aaPredicted RBP11.95□□□□□ -0.5
HMGCLL1-205ENST00000398661 TPD52L1Q16890 204 aaPredicted RBP11.95□□□□□ -0.5
HMGCLL1-205ENST00000398661 BICC1Q9H694 974 aaKnown RBP11.95□□□□□ -0.5
HMGCLL1-205ENST00000398661 MYH14Q7Z406 1995 aaKnown RBP11.95□□□□□ -0.5
HMGCLL1-205ENST00000398661 ONECUT3O60422 494 aaPredicted RBP11.95□□□□□ -0.5
HMGCLL1-205ENST00000398661 RBM6P78332 1123 aaKnown RBP11.95□□□□□ -0.5
HMGCLL1-205ENST00000398661 CEP135Q66GS9 1140 aa11.95□□□□□ -0.5
HMGCLL1-205ENST00000398661 RPAP2Q8IXW5 612 aaPredicted RBP11.95□□□□□ -0.5
HMGCLL1-205ENST00000398661 TRERF1Q96PN7 1200 aa11.95□□□□□ -0.5
HMGCLL1-205ENST00000398661 ESYT1Q9BSJ8 1104 aa11.95□□□□□ -0.5
HMGCLL1-205ENST00000398661 METTL22Q9BUU2 404 aaPredicted RBP11.95□□□□□ -0.5
HMGCLL1-205ENST00000398661 ST7Q9NRC1 585 aa11.95□□□□□ -0.5
HMGCLL1-205ENST00000398661 SRP68Q9UHB9 627 aaKnown RBP11.95□□□□□ -0.5
HMGCLL1-205ENST00000398661 FEZ2Q9UHY8 353 aaPredicted RBP11.95□□□□□ -0.5
HMGCLL1-205ENST00000398661 CCNL1Q9UK58 526 aaPredicted RBP11.95□□□□□ -0.5
HMGCLL1-205ENST00000398661 CHMP3Q9Y3E7 222 aa11.95□□□□□ -0.5
HMGCLL1-205ENST00000398661 FIBPO43427 364 aa11.94□□□□□ -0.5
HMGCLL1-205ENST00000398661 DDX58O95786 925 aaKnown RBP11.94□□□□□ -0.5
HMGCLL1-205ENST00000398661 RXRBP28702 533 aa11.94□□□□□ -0.5
HMGCLL1-205ENST00000398661 CYP2C19P33261 490 aa11.94□□□□□ -0.5
HMGCLL1-205ENST00000398661 GCKRQ14397 625 aa11.94□□□□□ -0.5
HMGCLL1-205ENST00000398661 ZSCAN25Q6NSZ9 544 aa11.94□□□□□ -0.5
HMGCLL1-205ENST00000398661 DRC7Q8IY82 874 aa11.94□□□□□ -0.5
HMGCLL1-205ENST00000398661 FBXO41Q8TF61 875 aa11.94□□□□□ -0.5
HMGCLL1-205ENST00000398661 WNK3Q9BYP7 1800 aa11.94□□□□□ -0.5
HMGCLL1-205ENST00000398661 GRM8O00222 908 aa11.94□□□□□ -0.5
HMGCLL1-205ENST00000398661 HNRNPH2P55795 449 aaKnown RBP11.94□□□□□ -0.5
HMGCLL1-205ENST00000398661 FBXO38Q6PIJ6 1188 aa11.94□□□□□ -0.5
HMGCLL1-205ENST00000398661 DZIP3Q86Y13 1208 aaKnown RBP11.94□□□□□ -0.5
HMGCLL1-205ENST00000398661 FAM200AQ8TCP9 573 aa11.94□□□□□ -0.5
HMGCLL1-205ENST00000398661 ZNF592Q92610 1267 aa11.94□□□□□ -0.5
HMGCLL1-205ENST00000398661 KIF1BPQ96EK5 621 aa11.94□□□□□ -0.5
HMGCLL1-205ENST00000398661 NOL10Q9BSC4 688 aaKnown RBP11.94□□□□□ -0.5
HMGCLL1-205ENST00000398661 NRBP1Q9UHY1 535 aa11.94□□□□□ -0.5
HMGCLL1-205ENST00000398661 NEXNQ0ZGT2 675 aa11.93□□□□□ -0.5
HMGCLL1-205ENST00000398661 LINS1Q8NG48 757 aa11.93□□□□□ -0.5
HMGCLL1-205ENST00000398661 PLBD2Q8NHP8 589 aa11.93□□□□□ -0.5
HMGCLL1-205ENST00000398661 ZNF215Q9UL58 517 aaPredicted RBP11.93□□□□□ -0.5
HMGCLL1-205ENST00000398661 SOS1Q07889 1333 aaPredicted RBP11.93□□□□□ -0.5
HMGCLL1-205ENST00000398661 GNPATO15228 680 aa11.93□□□□□ -0.5
HMGCLL1-205ENST00000398661 SLFNL1Q499Z3 407 aa11.93□□□□□ -0.5
HMGCLL1-205ENST00000398661 UPF3BQ9BZI7 483 aaKnown RBP11.93□□□□□ -0.5
HMGCLL1-205ENST00000398661 OSBPL3Q9H4L5 887 aa11.93□□□□□ -0.5
HMGCLL1-205ENST00000398661 NUTM1Q86Y26 1132 aa11.92□□□□□ -0.5
HMGCLL1-205ENST00000398661 IL17RAQ96F46 866 aa11.92□□□□□ -0.5
HMGCLL1-205ENST00000398661 CCDC87Q9NVE4 849 aa11.92□□□□□ -0.5
HMGCLL1-205ENST00000398661 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.92□□□□□ -0.5
HMGCLL1-205ENST00000398661 V9GYY5 206 aaPredicted RBP11.92□□□□□ -0.5
HMGCLL1-205ENST00000398661 F13A1P00488 732 aa11.92□□□□□ -0.5
HMGCLL1-205ENST00000398661 PDE1AP54750 535 aa11.92□□□□□ -0.5
HMGCLL1-205ENST00000398661 CERS3Q8IU89 383 aa11.92□□□□□ -0.5
HMGCLL1-205ENST00000398661 PROM2Q8N271 834 aa11.92□□□□□ -0.5
HMGCLL1-205ENST00000398661 ERO1AQ96HE7 468 aa11.92□□□□□ -0.5
HMGCLL1-205ENST00000398661 ATP6V1DQ9Y5K8 247 aa11.92□□□□□ -0.5
HMGCLL1-205ENST00000398661 UBR2Q8IWV8 1755 aa11.92□□□□□ -0.5
HMGCLL1-205ENST00000398661 BRWD3Q6RI45 1802 aa11.91□□□□□ -0.5
HMGCLL1-205ENST00000398661 STX6O43752 255 aa11.91□□□□□ -0.5
HMGCLL1-205ENST00000398661 SURF6O75683 361 aaKnown RBP11.91□□□□□ -0.5
HMGCLL1-205ENST00000398661 ELF2Q15723 593 aa11.91□□□□□ -0.5
HMGCLL1-205ENST00000398661 ZNF772Q68DY9 489 aaPredicted RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms