RNA–Protein interactions for RNA: ENST00000398559.6

TMF1-201, Transcript of TATA element modulatory factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMF1, Length 6,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMF1-201ENST00000398559 KRT23Q9C075 422 aa13.43□□□□□ -0.26
TMF1-201ENST00000398559 TTC21BQ7Z4L5 1316 aa13.43□□□□□ -0.26
TMF1-201ENST00000398559 NBPF7P0C2Y1 421 aaPredicted RBP13.43□□□□□ -0.26
TMF1-201ENST00000398559 KRT13P13646 458 aa13.43□□□□□ -0.26
TMF1-201ENST00000398559 CCDC174Q6PII3 467 aa13.43□□□□□ -0.26
TMF1-201ENST00000398559 C16orf71Q8IYS4 520 aaPredicted RBP13.43□□□□□ -0.26
TMF1-201ENST00000398559 BICD1Q96G01 975 aa13.43□□□□□ -0.26
TMF1-201ENST00000398559 SCAF11Q99590 1463 aaKnown RBP13.43□□□□□ -0.26
TMF1-201ENST00000398559 WASLO00401 505 aaPredicted RBP13.42□□□□□ -0.26
TMF1-201ENST00000398559 RTN1Q16799 776 aa13.42□□□□□ -0.26
TMF1-201ENST00000398559 IFIT1BQ5T764 474 aaKnown RBP13.42□□□□□ -0.26
TMF1-201ENST00000398559 SELENOSQ9BQE4 189 aa13.42□□□□□ -0.26
TMF1-201ENST00000398559 DCAF8L1A6NGE4 600 aa13.42□□□□□ -0.26
TMF1-201ENST00000398559 AEBP2Q6ZN18 517 aaPredicted RBP13.42□□□□□ -0.26
TMF1-201ENST00000398559 CCDC129Q6ZRS4 1044 aa13.42□□□□□ -0.26
TMF1-201ENST00000398559 RGS22Q8NE09 1264 aa13.42□□□□□ -0.26
TMF1-201ENST00000398559 PLVAPQ9BX97 442 aa13.42□□□□□ -0.26
TMF1-201ENST00000398559 GTPBP4Q9BZE4 634 aaKnown RBP13.42□□□□□ -0.26
TMF1-201ENST00000398559 BAG3O95817 575 aa13.42□□□□□ -0.26
TMF1-201ENST00000398559 ANXA1P04083 346 aa13.42□□□□□ -0.26
TMF1-201ENST00000398559 SPAG1Q07617 926 aa13.42□□□□□ -0.26
TMF1-201ENST00000398559 RAB3GAP1Q15042 981 aa13.42□□□□□ -0.26
TMF1-201ENST00000398559 WDR78Q5VTH9 848 aa13.42□□□□□ -0.26
TMF1-201ENST00000398559 ANKS4BQ8N8V4 417 aa13.42□□□□□ -0.26
TMF1-201ENST00000398559 DHX58Q96C10 678 aa13.42□□□□□ -0.26
TMF1-201ENST00000398559 BMP15O95972 392 aa13.42□□□□□ -0.26
TMF1-201ENST00000398559 MCMDC2Q4G0Z9 681 aa13.42□□□□□ -0.26
TMF1-201ENST00000398559 CCDC121Q6ZUS5 278 aa13.42□□□□□ -0.26
TMF1-201ENST00000398559 SNAPC4Q5SXM2 1469 aa13.41□□□□□ -0.26
TMF1-201ENST00000398559 PUS7Q96PZ0 661 aaKnown RBP13.41□□□□□ -0.26
TMF1-201ENST00000398559 FERMT1Q9BQL6 677 aa13.41□□□□□ -0.26
TMF1-201ENST00000398559 IQCGQ9H095 443 aaKnown RBP13.41□□□□□ -0.26
TMF1-201ENST00000398559 SYT10Q6XYQ8 523 aa13.41□□□□□ -0.26
TMF1-201ENST00000398559 CDC5LQ99459 802 aaKnown RBP13.41□□□□□ -0.26
TMF1-201ENST00000398559 TMEM110-MUSTN1A8MSY1 372 aa13.41□□□□□ -0.26
TMF1-201ENST00000398559 TUBB4AP04350 444 aa13.41□□□□□ -0.26
TMF1-201ENST00000398559 TERF1P54274 439 aa13.41□□□□□ -0.26
TMF1-201ENST00000398559 KRT83P78385 493 aa13.41□□□□□ -0.26
TMF1-201ENST00000398559 ARID5AQ03989 594 aa13.41□□□□□ -0.26
TMF1-201ENST00000398559 ARHGAP45Q92619 1136 aa13.41□□□□□ -0.26
TMF1-201ENST00000398559 LZTFL1Q9NQ48 299 aa13.41□□□□□ -0.26
TMF1-201ENST00000398559 ABCC5O15440 1437 aa13.41□□□□□ -0.26
TMF1-201ENST00000398559 PSMA7O14818 248 aa13.41□□□□□ -0.26
TMF1-201ENST00000398559 RHOXF2BP0C7M4 288 aa13.41□□□□□ -0.26
TMF1-201ENST00000398559 HEATR3Q7Z4Q2 680 aa13.41□□□□□ -0.26
TMF1-201ENST00000398559 RHOXF2Q9BQY4 288 aa13.41□□□□□ -0.26
TMF1-201ENST00000398559 CRNKL1Q9BZJ0 848 aaKnown RBP13.41□□□□□ -0.26
TMF1-201ENST00000398559 ZNF569Q5MCW4 686 aa13.4□□□□□ -0.26
TMF1-201ENST00000398559 ASIC1P78348 528 aa13.4□□□□□ -0.26
TMF1-201ENST00000398559 SPTLC2O15270 562 aa13.4□□□□□ -0.26
TMF1-201ENST00000398559 LDHCP07864 332 aa13.4□□□□□ -0.26
TMF1-201ENST00000398559 UQCRFS1P1P0C7P4 283 aa13.4□□□□□ -0.26
TMF1-201ENST00000398559 KIF5AQ12840 1032 aa13.4□□□□□ -0.26
TMF1-201ENST00000398559 TTC31Q49AM3 519 aaPredicted RBP13.4□□□□□ -0.26
TMF1-201ENST00000398559 NBPF11Q86T75 865 aa13.4□□□□□ -0.26
TMF1-201ENST00000398559 STMN4Q9H169 189 aaPredicted RBP13.4□□□□□ -0.26
TMF1-201ENST00000398559 GUCA1BQ9UMX6 200 aa13.4□□□□□ -0.26
TMF1-201ENST00000398559 C6orf229H3BNL8 230 aa13.4□□□□□ -0.26
TMF1-201ENST00000398559 KRT86O43790 486 aa13.4□□□□□ -0.26
TMF1-201ENST00000398559 IGSF3O75054 1194 aa13.4□□□□□ -0.26
TMF1-201ENST00000398559 ERMNQ8TAM6 284 aa13.4□□□□□ -0.26
TMF1-201ENST00000398559 STX8Q9UNK0 236 aa13.4□□□□□ -0.26
TMF1-201ENST00000398559 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.4□□□□□ -0.26
TMF1-201ENST00000398559 SLC4A4Q9Y6R1 1079 aa13.4□□□□□ -0.26
TMF1-201ENST00000398559 TSPY3P0CV98 308 aa13.4□□□□□ -0.26
TMF1-201ENST00000398559 TSPY8P0CW00 308 aa13.4□□□□□ -0.26
TMF1-201ENST00000398559 OTUD6BQ8N6M0 293 aa13.4□□□□□ -0.26
TMF1-201ENST00000398559 IFNKQ9P0W0 207 aa13.4□□□□□ -0.26
TMF1-201ENST00000398559 CHPF2Q9P2E5 772 aa13.4□□□□□ -0.26
TMF1-201ENST00000398559 NMIQ13287 307 aaPredicted RBP13.39□□□□□ -0.27
TMF1-201ENST00000398559 DNAJC21Q5F1R6 531 aaKnown RBP13.39□□□□□ -0.27
TMF1-201ENST00000398559 CEP57Q86XR8 500 aa13.39□□□□□ -0.27
TMF1-201ENST00000398559 ANKRD44Q8N8A2 993 aa13.39□□□□□ -0.27
TMF1-201ENST00000398559 SYNCQ9H7C4 482 aa13.39□□□□□ -0.27
TMF1-201ENST00000398559 UBXN1Q04323 297 aa13.39□□□□□ -0.27
TMF1-201ENST00000398559 SREK1Q8WXA9 508 aaKnown RBP13.39□□□□□ -0.27
TMF1-201ENST00000398559 FEZ1Q99689 392 aa13.39□□□□□ -0.27
TMF1-201ENST00000398559 PHACTR2O75167 634 aa13.39□□□□□ -0.27
TMF1-201ENST00000398559 ZNF219Q9P2Y4 722 aaPredicted RBP13.39□□□□□ -0.27
TMF1-201ENST00000398559 CCDC160A6NGH7 325 aa13.39□□□□□ -0.27
TMF1-201ENST00000398559 ZEB2O60315 1214 aa13.39□□□□□ -0.27
TMF1-201ENST00000398559 CNNM2Q9H8M5 875 aa13.39□□□□□ -0.27
TMF1-201ENST00000398559 MRVI1Q9Y6F6 885 aa13.39□□□□□ -0.27
TMF1-201ENST00000398559 EBAG9O00559 213 aa13.39□□□□□ -0.27
TMF1-201ENST00000398559 AK2P54819 239 aa13.39□□□□□ -0.27
TMF1-201ENST00000398559 MRPL50Q8N5N7 158 aaKnown RBP13.39□□□□□ -0.27
TMF1-201ENST00000398559 PHF8Q9UPP1 1060 aa13.39□□□□□ -0.27
TMF1-201ENST00000398559 KIF14Q15058 1648 aa13.39□□□□□ -0.27
TMF1-201ENST00000398559 SMIM23A6NLE4 172 aa13.39□□□□□ -0.27
TMF1-201ENST00000398559 ZFYP08048 801 aaPredicted RBP13.39□□□□□ -0.27
TMF1-201ENST00000398559 PRPHP41219 470 aa13.39□□□□□ -0.27
TMF1-201ENST00000398559 HS1BP3Q53T59 392 aa13.39□□□□□ -0.27
TMF1-201ENST00000398559 GSTA5Q7RTV2 222 aa13.39□□□□□ -0.27
TMF1-201ENST00000398559 TMTC2Q8N394 836 aa13.39□□□□□ -0.27
TMF1-201ENST00000398559 CCDC77Q9BR77 488 aa13.39□□□□□ -0.27
TMF1-201ENST00000398559 HLA-DOAP06340 250 aa13.38□□□□□ -0.27
TMF1-201ENST00000398559 STX17P56962 302 aa13.38□□□□□ -0.27
TMF1-201ENST00000398559 ZGPATQ8N5A5 531 aaKnown RBP13.38□□□□□ -0.27
TMF1-201ENST00000398559 IFT81Q8WYA0 676 aa13.38□□□□□ -0.27
TMF1-201ENST00000398559 ESR2Q92731 530 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms