RNA–Protein interactions for RNA: ENST00000398193.8

RGPD1-201, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RGPD1, Length 5,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-201ENST00000398193 ADRA2BP18089 450 aa8.87□□□□□ -0.99
RGPD1-201ENST00000398193 ITPK1Q13572 414 aa8.87□□□□□ -0.99
RGPD1-201ENST00000398193 TTC39AQ5SRH9 613 aa8.87□□□□□ -0.99
RGPD1-201ENST00000398193 CHMP3Q9Y3E7 222 aa8.87□□□□□ -0.99
RGPD1-201ENST00000398193 LAMA4Q16363 1823 aa8.87□□□□□ -0.99
RGPD1-201ENST00000398193 MAST2Q6P0Q8 1798 aa8.87□□□□□ -0.99
RGPD1-201ENST00000398193 GOLGA6L22H0YM25 854 aa8.87□□□□□ -0.99
RGPD1-201ENST00000398193 RNF113AO15541 343 aaKnown RBP8.87□□□□□ -0.99
RGPD1-201ENST00000398193 RPS6KA4O75676 772 aa8.87□□□□□ -0.99
RGPD1-201ENST00000398193 NTSR2O95665 410 aa8.87□□□□□ -0.99
RGPD1-201ENST00000398193 ITGA6P23229 1130 aa8.87□□□□□ -0.99
RGPD1-201ENST00000398193 MCM4P33991 863 aa8.87□□□□□ -0.99
RGPD1-201ENST00000398193 ZMYM1Q5SVZ6 1142 aa8.87□□□□□ -0.99
RGPD1-201ENST00000398193 VGLL2Q8N8G2 317 aa8.87□□□□□ -0.99
RGPD1-201ENST00000398193 SYTL4Q96C24 671 aaPredicted RBP8.86□□□□□ -0.99
RGPD1-201ENST00000398193 GJD4Q96KN9 370 aaPredicted RBP8.86□□□□□ -0.99
RGPD1-201ENST00000398193 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.86□□□□□ -0.99
RGPD1-201ENST00000398193 PDS5AQ29RF7 1337 aaKnown RBP8.86□□□□□ -0.99
RGPD1-201ENST00000398193 A0A1B0GUL7 405 aa8.86□□□□□ -0.99
RGPD1-201ENST00000398193 RUFY3Q7L099 469 aa8.86□□□□□ -0.99
RGPD1-201ENST00000398193 C8orf37Q96NL8 207 aa8.86□□□□□ -0.99
RGPD1-201ENST00000398193 DBNDD2Q9BQY9 259 aa8.86□□□□□ -0.99
RGPD1-201ENST00000398193 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.86□□□□□ -0.99
RGPD1-201ENST00000398193 BOLA2Q9H3K6 86 aa8.86□□□□□ -0.99
RGPD1-201ENST00000398193 CYP46A1Q9Y6A2 500 aa8.86□□□□□ -0.99
RGPD1-201ENST00000398193 WDR19Q8NEZ3 1342 aa8.86□□□□□ -0.99
RGPD1-201ENST00000398193 TIAM2Q8IVF5 1701 aa8.86□□□□□ -0.99
RGPD1-201ENST00000398193 CD2BP2O95400 341 aaKnown RBP8.86□□□□□ -0.99
RGPD1-201ENST00000398193 NEK4P51957 841 aa8.86□□□□□ -0.99
RGPD1-201ENST00000398193 NBR1Q14596 966 aa8.86□□□□□ -0.99
RGPD1-201ENST00000398193 PUM3Q15397 648 aaKnown RBP8.86□□□□□ -0.99
RGPD1-201ENST00000398193 CREB3L3Q68CJ9 461 aa8.86□□□□□ -0.99
RGPD1-201ENST00000398193 FBXL16Q8N461 479 aa8.86□□□□□ -0.99
RGPD1-201ENST00000398193 TMX3Q96JJ7 454 aa8.86□□□□□ -0.99
RGPD1-201ENST00000398193 SLKQ9H2G2 1235 aaPredicted RBP8.86□□□□□ -0.99
RGPD1-201ENST00000398193 FAM98CQ17RN3 349 aaKnown RBP8.85□□□□□ -0.99
RGPD1-201ENST00000398193 MEX3CQ5U5Q3 659 aaKnown RBP8.85□□□□□ -0.99
RGPD1-201ENST00000398193 LIMCH1Q9UPQ0 1083 aa8.85□□□□□ -0.99
RGPD1-201ENST00000398193 SLC27A2O14975 620 aa8.85□□□□□ -0.99
RGPD1-201ENST00000398193 MAP4K4O95819 1239 aaPredicted RBP8.85□□□□□ -0.99
RGPD1-201ENST00000398193 IFIT1P09914 478 aaKnown RBP8.85□□□□□ -0.99
RGPD1-201ENST00000398193 FGFR2P21802 821 aa8.85□□□□□ -0.99
RGPD1-201ENST00000398193 SF3B3Q15393 1217 aaKnown RBP8.85□□□□□ -0.99
RGPD1-201ENST00000398193 LPIN2Q92539 896 aa8.85□□□□□ -0.99
RGPD1-201ENST00000398193 XAGE2Q96GT9 111 aa8.85□□□□□ -0.99
RGPD1-201ENST00000398193 BCL11BQ9C0K0 894 aaPredicted RBP8.85□□□□□ -0.99
RGPD1-201ENST00000398193 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.85□□□□□ -0.99
RGPD1-201ENST00000398193 SLC5A1P13866 664 aa8.85□□□□□ -0.99
RGPD1-201ENST00000398193 SLC27A3Q5K4L6 730 aa8.85□□□□□ -0.99
RGPD1-201ENST00000398193 LINC00116Q8NCU8 138 aa8.85□□□□□ -0.99
RGPD1-201ENST00000398193 KLHDC4Q8TBB5 520 aa8.85□□□□□ -0.99
RGPD1-201ENST00000398193 NARFQ9UHQ1 456 aa8.85□□□□□ -0.99
RGPD1-201ENST00000398193 RBM8AQ9Y5S9 174 aaKnown RBP8.85□□□□□ -0.99
RGPD1-201ENST00000398193 TAF5LO75529 589 aa8.85□□□□□ -0.99
RGPD1-201ENST00000398193 LRRC24Q50LG9 513 aa8.85□□□□□ -0.99
RGPD1-201ENST00000398193 ATP2B3Q16720 1220 aa8.84□□□□□ -0.99
RGPD1-201ENST00000398193 CTNNA3Q9UI47 895 aa8.84□□□□□ -0.99
RGPD1-201ENST00000398193 PALD1Q9ULE6 856 aa8.84□□□□□ -0.99
RGPD1-201ENST00000398193 MYH14Q7Z406 1995 aaKnown RBP8.84□□□□□ -0.99
RGPD1-201ENST00000398193 FAM89AQ96GI7 184 aa8.84□□□□□ -0.99
RGPD1-201ENST00000398193 PDRG1Q9NUG6 133 aa8.84□□□□□ -0.99
RGPD1-201ENST00000398193 SUSD4Q5VX71 490 aa8.84□□□□□ -0.99
RGPD1-201ENST00000398193 TNPO1Q92973 898 aaKnown RBP8.84□□□□□ -0.99
RGPD1-201ENST00000398193 METTL24Q5JXM2 366 aa8.84□□□□□ -0.99
RGPD1-201ENST00000398193 CNNM1Q9NRU3 951 aa8.84□□□□□ -0.99
RGPD1-201ENST00000398193 PDE8BO95263 885 aa8.83□□□□□ -1
RGPD1-201ENST00000398193 IGHMBP2P38935 993 aaKnown RBP8.83□□□□□ -1
RGPD1-201ENST00000398193 GSE1Q14687 1217 aa8.83□□□□□ -1
RGPD1-201ENST00000398193 ACSBG1Q96GR2 724 aa8.83□□□□□ -1
RGPD1-201ENST00000398193 A0A0D9SFI3 127 aa8.83□□□□□ -1
RGPD1-201ENST00000398193 PTH1RQ03431 593 aa8.83□□□□□ -1
RGPD1-201ENST00000398193 GREM2Q9H772 168 aa8.83□□□□□ -1
RGPD1-201ENST00000398193 SEMA3EO15041 775 aa8.83□□□□□ -1
RGPD1-201ENST00000398193 FRAT2O75474 233 aaPredicted RBP8.83□□□□□ -1
RGPD1-201ENST00000398193 RPS6KB1P23443 525 aa8.83□□□□□ -1
RGPD1-201ENST00000398193 IL25Q9H293 177 aa8.83□□□□□ -1
RGPD1-201ENST00000398193 UBE3CQ15386 1083 aa8.83□□□□□ -1
RGPD1-201ENST00000398193 LDHAL6AQ6ZMR3 332 aa8.83□□□□□ -1
RGPD1-201ENST00000398193 JARID2Q92833 1246 aaPredicted RBP8.83□□□□□ -1
RGPD1-201ENST00000398193 NEUROD6Q96NK8 337 aa8.83□□□□□ -1
RGPD1-201ENST00000398193 AFF2P51816 1311 aa8.82□□□□□ -1
RGPD1-201ENST00000398193 GORABQ5T7V8 394 aa8.82□□□□□ -1
RGPD1-201ENST00000398193 FAM227BQ96M60 508 aa8.82□□□□□ -1
RGPD1-201ENST00000398193 WDR33Q9C0J8 1336 aaKnown RBP8.82□□□□□ -1
RGPD1-201ENST00000398193 LRRC37AA6NMS7 1700 aa8.82□□□□□ -1
RGPD1-201ENST00000398193 NT5C2P49902 561 aa8.82□□□□□ -1
RGPD1-201ENST00000398193 PRPF40BQ6NWY9 871 aaKnown RBP8.82□□□□□ -1
RGPD1-201ENST00000398193 DNAJC2Q99543 621 aaKnown RBP8.82□□□□□ -1
RGPD1-201ENST00000398193 UBR3Q6ZT12 1888 aa8.82□□□□□ -1
RGPD1-201ENST00000398193 APPBP2Q92624 585 aa8.82□□□□□ -1
RGPD1-201ENST00000398193 PUS3Q9BZE2 481 aaKnown RBP8.82□□□□□ -1
RGPD1-201ENST00000398193 NIP7Q9Y221 180 aaKnown RBP eCLIP8.82□□□□□ -1
RGPD1-201ENST00000398193 QSER1Q2KHR3 1735 aa8.82□□□□□ -1
RGPD1-201ENST00000398193 ZNF594Q96JF6 807 aaPredicted RBP8.82□□□□□ -1
RGPD1-201ENST00000398193 BSDC1Q9NW68 430 aaPredicted RBP8.82□□□□□ -1
RGPD1-201ENST00000398193 TBC1D2BQ9UPU7 963 aa8.82□□□□□ -1
RGPD1-201ENST00000398193 AKAP11Q9UKA4 1901 aa8.82□□□□□ -1
RGPD1-201ENST00000398193 BRD1O95696 1058 aa8.81□□□□□ -1
RGPD1-201ENST00000398193 CASTP20810 708 aaKnown RBP8.81□□□□□ -1
RGPD1-201ENST00000398193 GPTP24298 496 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms