RNA–Protein interactions for RNA: ENST00000398020.6

TMEM55B-202, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-202ENST00000398020 LDHAL6AQ6ZMR3 332 aa31.7■■■□□ 2.67
TMEM55B-202ENST00000398020 PSMD1Q99460 953 aa31.7■■■□□ 2.67
TMEM55B-202ENST00000398020 ANKIB1Q9P2G1 1089 aa31.7■■■□□ 2.67
TMEM55B-202ENST00000398020 GRIPAP1Q4V328 841 aa31.7■■■□□ 2.66
TMEM55B-202ENST00000398020 PUS3Q9BZE2 481 aaKnown RBP31.7■■■□□ 2.66
TMEM55B-202ENST00000398020 RNF181Q9P0P0 153 aa31.7■■■□□ 2.66
TMEM55B-202ENST00000398020 DUOX1Q9NRD9 1551 aa31.69■■■□□ 2.66
TMEM55B-202ENST00000398020 LMNB1P20700 586 aa31.69■■■□□ 2.66
TMEM55B-202ENST00000398020 RFX5P48382 616 aaPredicted RBP31.69■■■□□ 2.66
TMEM55B-202ENST00000398020 SRGAP3O43295 1099 aa31.68■■■□□ 2.66
TMEM55B-202ENST00000398020 CNNM1Q9NRU3 951 aa31.68■■■□□ 2.66
TMEM55B-202ENST00000398020 LTBP1Q14766 1721 aa31.68■■■□□ 2.66
TMEM55B-202ENST00000398020 POLLQ9UGP5 575 aa31.67■■■□□ 2.66
TMEM55B-202ENST00000398020 PNMA6EA0A0J9YXQ4 647 aa31.66■■■□□ 2.66
TMEM55B-202ENST00000398020 WTIPA6NIX2 430 aaPredicted RBP31.66■■■□□ 2.66
TMEM55B-202ENST00000398020 GPR101Q96P66 508 aaPredicted RBP31.66■■■□□ 2.66
TMEM55B-202ENST00000398020 ZBTB40Q9NUA8 1239 aa31.66■■■□□ 2.66
TMEM55B-202ENST00000398020 C6orf229H3BNL8 230 aa31.65■■■□□ 2.66
TMEM55B-202ENST00000398020 PTPN12Q05209 780 aaKnown RBP31.65■■■□□ 2.66
TMEM55B-202ENST00000398020 CHRNDQ07001 517 aa31.65■■■□□ 2.66
TMEM55B-202ENST00000398020 MTX1Q13505 466 aa31.65■■■□□ 2.66
TMEM55B-202ENST00000398020 LRRC24Q50LG9 513 aa31.65■■■□□ 2.66
TMEM55B-202ENST00000398020 HELBQ8NG08 1087 aaPredicted RBP31.65■■■□□ 2.66
TMEM55B-202ENST00000398020 RTFDC1Q9BY42 306 aaPredicted RBP31.65■■■□□ 2.66
TMEM55B-202ENST00000398020 XDHP47989 1333 aa31.65■■■□□ 2.66
TMEM55B-202ENST00000398020 TBC1D16Q8TBP0 767 aa31.64■■■□□ 2.66
TMEM55B-202ENST00000398020 SIL1Q9H173 461 aa31.64■■■□□ 2.66
TMEM55B-202ENST00000398020 PODXL2Q9NZ53 605 aa31.64■■■□□ 2.66
TMEM55B-202ENST00000398020 PA2G4Q9UQ80 394 aaKnown RBP31.64■■■□□ 2.66
TMEM55B-202ENST00000398020 UFL1O94874 794 aa31.64■■■□□ 2.65
TMEM55B-202ENST00000398020 IARSP41252 1262 aaKnown RBP31.64■■■□□ 2.65
TMEM55B-202ENST00000398020 AOC3Q16853 763 aa31.63■■■□□ 2.65
TMEM55B-202ENST00000398020 GGA1Q9UJY5 639 aa31.63■■■□□ 2.65
TMEM55B-202ENST00000398020 TAF5LO75529 589 aa31.62■■■□□ 2.65
TMEM55B-202ENST00000398020 SUPT20HQ8NEM7 779 aa31.62■■■□□ 2.65
TMEM55B-202ENST00000398020 CRBNQ96SW2 442 aa31.62■■■□□ 2.65
TMEM55B-202ENST00000398020 PPIP5K2O43314 1243 aa31.61■■■□□ 2.65
TMEM55B-202ENST00000398020 RIPOR2Q9Y4F9 1068 aa31.61■■■□□ 2.65
TMEM55B-202ENST00000398020 A0A1B0GUL6 1792 aa31.61■■■□□ 2.65
TMEM55B-202ENST00000398020 ANKRD2Q9GZV1 360 aa31.6■■■□□ 2.65
TMEM55B-202ENST00000398020 CHMP4BQ9H444 224 aaKnown RBP31.6■■■□□ 2.65
TMEM55B-202ENST00000398020 COL4A5P29400 1685 aa31.6■■■□□ 2.65
TMEM55B-202ENST00000398020 SNAP23O00161 211 aa31.6■■■□□ 2.65
TMEM55B-202ENST00000398020 RIMBP2O15034 1052 aa31.6■■■□□ 2.65
TMEM55B-202ENST00000398020 ATP8B2P98198 1209 aa31.6■■■□□ 2.65
TMEM55B-202ENST00000398020 CEP85Q6P2H3 762 aa31.6■■■□□ 2.65
TMEM55B-202ENST00000398020 LARGE2Q8N3Y3 721 aa31.6■■■□□ 2.65
TMEM55B-202ENST00000398020 TIAM2Q8IVF5 1701 aa31.59■■■□□ 2.65
TMEM55B-202ENST00000398020 DICER1Q9UPY3 1922 aaKnown RBP31.59■■■□□ 2.65
TMEM55B-202ENST00000398020 WASHC4Q2M389 1173 aa31.59■■■□□ 2.65
TMEM55B-202ENST00000398020 EYA2O00167 538 aa31.58■■■□□ 2.65
TMEM55B-202ENST00000398020 ATP2B4P23634 1241 aa31.57■■■□□ 2.65
TMEM55B-202ENST00000398020 COPRSQ9NQ92 184 aa31.57■■■□□ 2.65
TMEM55B-202ENST00000398020 YY1P25490 414 aa31.57■■■□□ 2.64
TMEM55B-202ENST00000398020 KIAA2012Q0VF49 1180 aa31.57■■■□□ 2.64
TMEM55B-202ENST00000398020 KCNJ4P48050 445 aa31.56■■■□□ 2.64
TMEM55B-202ENST00000398020 METTL24Q5JXM2 366 aa31.56■■■□□ 2.64
TMEM55B-202ENST00000398020 ATG9AQ7Z3C6 839 aa31.56■■■□□ 2.64
TMEM55B-202ENST00000398020 ZNF804BA4D1E1 1349 aa31.55■■■□□ 2.64
TMEM55B-202ENST00000398020 MROH5Q6ZUA9 1318 aa31.55■■■□□ 2.64
TMEM55B-202ENST00000398020 POLA2Q14181 598 aa31.55■■■□□ 2.64
TMEM55B-202ENST00000398020 SSH3Q8TE77 659 aa31.55■■■□□ 2.64
TMEM55B-202ENST00000398020 EYA3Q99504 573 aa31.55■■■□□ 2.64
TMEM55B-202ENST00000398020 JDP2Q8WYK2 163 aa31.54■■■□□ 2.64
TMEM55B-202ENST00000398020 LEMD3Q9Y2U8 911 aa31.54■■■□□ 2.64
TMEM55B-202ENST00000398020 KLRK1P26718 216 aa31.54■■■□□ 2.64
TMEM55B-202ENST00000398020 ZC3H12CQ9C0D7 883 aaKnown RBP31.54■■■□□ 2.64
TMEM55B-202ENST00000398020 IRX6P78412 446 aaPredicted RBP31.53■■■□□ 2.64
TMEM55B-202ENST00000398020 VPS33BQ9H267 617 aa31.53■■■□□ 2.64
TMEM55B-202ENST00000398020 CIAO1O76071 339 aa31.52■■■□□ 2.64
TMEM55B-202ENST00000398020 NIM1KQ8IY84 436 aa31.52■■■□□ 2.64
TMEM55B-202ENST00000398020 DOK7Q18PE1 504 aa31.51■■■□□ 2.64
TMEM55B-202ENST00000398020 TXNRD3Q86VQ6 643 aa31.51■■■□□ 2.64
TMEM55B-202ENST00000398020 SIRT2Q8IXJ6 389 aa31.51■■■□□ 2.64
TMEM55B-202ENST00000398020 DBNDD1Q9H9R9 158 aa31.51■■■□□ 2.64
TMEM55B-202ENST00000398020 VGLL2Q8N8G2 317 aa31.51■■■□□ 2.63
TMEM55B-202ENST00000398020 FBXO3Q9UK99 471 aa31.51■■■□□ 2.63
TMEM55B-202ENST00000398020 RPAP2Q8IXW5 612 aaPredicted RBP31.5■■■□□ 2.63
TMEM55B-202ENST00000398020 PDE8BO95263 885 aa31.49■■■□□ 2.63
TMEM55B-202ENST00000398020 IL15P40933 162 aaPredicted RBP31.49■■■□□ 2.63
TMEM55B-202ENST00000398020 MED23Q9ULK4 1368 aa31.49■■■□□ 2.63
TMEM55B-202ENST00000398020 ZNF526Q8TF50 670 aaPredicted RBP31.48■■■□□ 2.63
TMEM55B-202ENST00000398020 SURF6O75683 361 aaKnown RBP31.48■■■□□ 2.63
TMEM55B-202ENST00000398020 ZNF541Q9H0D2 1346 aa31.47■■■□□ 2.63
TMEM55B-202ENST00000398020 FZD9O00144 591 aa31.47■■■□□ 2.63
TMEM55B-202ENST00000398020 G3BP1Q13283 466 aaKnown RBP eCLIP31.47■■■□□ 2.63
TMEM55B-202ENST00000398020 EXOC6Q8TAG9 804 aa31.47■■■□□ 2.63
TMEM55B-202ENST00000398020 ZC3H4Q9UPT8 1303 aaKnown RBP31.47■■■□□ 2.63
TMEM55B-202ENST00000398020 G3V3G9 751 aa31.46■■■□□ 2.63
TMEM55B-202ENST00000398020 DCAF8Q5TAQ9 597 aa31.46■■■□□ 2.63
TMEM55B-202ENST00000398020 CEP126Q9P2H0 1117 aa31.46■■■□□ 2.63
TMEM55B-202ENST00000398020 ZNRF3Q9ULT6 936 aa31.46■■■□□ 2.63
TMEM55B-202ENST00000398020 ECE2O60344 883 aa31.45■■■□□ 2.63
TMEM55B-202ENST00000398020 UBE4AQ14139 1066 aa31.45■■■□□ 2.63
TMEM55B-202ENST00000398020 YDJCA8MPS7 323 aa31.44■■■□□ 2.62
TMEM55B-202ENST00000398020 TFCP2Q12800 502 aa31.44■■■□□ 2.62
TMEM55B-202ENST00000398020 OS9Q13438 667 aaPredicted RBP31.44■■■□□ 2.62
TMEM55B-202ENST00000398020 IRS2Q9Y4H2 1338 aa31.44■■■□□ 2.62
TMEM55B-202ENST00000398020 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP31.44■■■□□ 2.62
TMEM55B-202ENST00000398020 EXOC6BQ9Y2D4 811 aa31.44■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms