RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 TMC4Q7Z404 712 aa29.26■■■□□ 2.27
TSPAN4-203ENST00000397397 FBXO3Q9UK99 471 aa29.26■■■□□ 2.27
TSPAN4-203ENST00000397397 CIAO1O76071 339 aa29.25■■■□□ 2.27
TSPAN4-203ENST00000397397 CCDC136Q96JN2 1154 aa29.25■■■□□ 2.27
TSPAN4-203ENST00000397397 DALRD3Q5D0E6 543 aaKnown RBP29.24■■■□□ 2.27
TSPAN4-203ENST00000397397 ATG9AQ7Z3C6 839 aa29.24■■■□□ 2.27
TSPAN4-203ENST00000397397 DCTPP1Q9H773 170 aa29.24■■■□□ 2.27
TSPAN4-203ENST00000397397 RIPOR2Q9Y4F9 1068 aa29.24■■■□□ 2.27
TSPAN4-203ENST00000397397 IL15P40933 162 aaPredicted RBP29.23■■■□□ 2.27
TSPAN4-203ENST00000397397 HSP90AB4PQ58FF6 505 aa29.23■■■□□ 2.27
TSPAN4-203ENST00000397397 ZNF219Q9P2Y4 722 aaPredicted RBP29.23■■■□□ 2.27
TSPAN4-203ENST00000397397 UTRNP46939 3433 aa29.23■■■□□ 2.27
TSPAN4-203ENST00000397397 SP8Q8IXZ3 490 aa29.22■■■□□ 2.27
TSPAN4-203ENST00000397397 MINPP1Q9UNW1 487 aa29.22■■■□□ 2.27
TSPAN4-203ENST00000397397 ATP6V0A2Q9Y487 856 aa29.22■■■□□ 2.27
TSPAN4-203ENST00000397397 SLC51AQ86UW1 340 aa29.21■■■□□ 2.27
TSPAN4-203ENST00000397397 TMX4Q9H1E5 349 aaPredicted RBP29.21■■■□□ 2.27
TSPAN4-203ENST00000397397 APBB1O00213 710 aa29.2■■■□□ 2.27
TSPAN4-203ENST00000397397 METTL24Q5JXM2 366 aa29.2■■■□□ 2.27
TSPAN4-203ENST00000397397 GTF3C3Q9Y5Q9 886 aa29.2■■■□□ 2.27
TSPAN4-203ENST00000397397 LRRC37AA6NMS7 1700 aa29.2■■■□□ 2.26
TSPAN4-203ENST00000397397 MROH5Q6ZUA9 1318 aa29.2■■■□□ 2.26
TSPAN4-203ENST00000397397 YY1P25490 414 aa29.2■■■□□ 2.26
TSPAN4-203ENST00000397397 CHRNDQ07001 517 aa29.2■■■□□ 2.26
TSPAN4-203ENST00000397397 B4GALNT3Q6L9W6 998 aa29.2■■■□□ 2.26
TSPAN4-203ENST00000397397 ERC1Q8IUD2 1116 aa29.2■■■□□ 2.26
TSPAN4-203ENST00000397397 GCC1Q96CN9 775 aa29.2■■■□□ 2.26
TSPAN4-203ENST00000397397 BCS1LQ9Y276 419 aa29.2■■■□□ 2.26
TSPAN4-203ENST00000397397 GOLGB1Q14789 3259 aaKnown RBP29.19■■■□□ 2.26
TSPAN4-203ENST00000397397 C21orf2O43822 256 aa29.19■■■□□ 2.26
TSPAN4-203ENST00000397397 RAB11FIP3O75154 756 aa29.19■■■□□ 2.26
TSPAN4-203ENST00000397397 OLFM4Q6UX06 510 aa29.19■■■□□ 2.26
TSPAN4-203ENST00000397397 C7orf43Q8WVR3 580 aa29.19■■■□□ 2.26
TSPAN4-203ENST00000397397 A0A1B0GUL6 1792 aa29.18■■■□□ 2.26
TSPAN4-203ENST00000397397 SASH1O94885 1247 aa29.18■■■□□ 2.26
TSPAN4-203ENST00000397397 HELBQ8NG08 1087 aaPredicted RBP29.18■■■□□ 2.26
TSPAN4-203ENST00000397397 ANKRD2Q9GZV1 360 aa29.18■■■□□ 2.26
TSPAN4-203ENST00000397397 CEP126Q9P2H0 1117 aa29.18■■■□□ 2.26
TSPAN4-203ENST00000397397 TFCP2Q12800 502 aa29.16■■■□□ 2.26
TSPAN4-203ENST00000397397 SMC5Q8IY18 1101 aa29.16■■■□□ 2.26
TSPAN4-203ENST00000397397 ANKIB1Q9P2G1 1089 aa29.16■■■□□ 2.26
TSPAN4-203ENST00000397397 TAF5LO75529 589 aa29.15■■■□□ 2.26
TSPAN4-203ENST00000397397 GPSM2P81274 684 aa29.15■■■□□ 2.26
TSPAN4-203ENST00000397397 CC2D2BQ6DHV5 1058 aa29.15■■■□□ 2.26
TSPAN4-203ENST00000397397 RHPN1Q8TCX5 695 aa29.15■■■□□ 2.26
TSPAN4-203ENST00000397397 KIF1BPQ96EK5 621 aa29.15■■■□□ 2.26
TSPAN4-203ENST00000397397 ARFGEF1Q9Y6D6 1849 aa29.14■■■□□ 2.26
TSPAN4-203ENST00000397397 NSFL1CQ9UNZ2 370 aaKnown RBP29.14■■■□□ 2.26
TSPAN4-203ENST00000397397 XDHP47989 1333 aa29.14■■■□□ 2.25
TSPAN4-203ENST00000397397 CHD4Q14839 1912 aa29.13■■■□□ 2.25
TSPAN4-203ENST00000397397 PDE8BO95263 885 aa29.13■■■□□ 2.25
TSPAN4-203ENST00000397397 CCDC93Q567U6 631 aa29.13■■■□□ 2.25
TSPAN4-203ENST00000397397 SOGA3Q5TF21 947 aa29.13■■■□□ 2.25
TSPAN4-203ENST00000397397 VGLL2Q8N8G2 317 aa29.13■■■□□ 2.25
TSPAN4-203ENST00000397397 LRRCC1Q9C099 1032 aa29.13■■■□□ 2.25
TSPAN4-203ENST00000397397 GRIN3BO60391 1043 aa29.12■■■□□ 2.25
TSPAN4-203ENST00000397397 CENPQQ7L2Z9 268 aaPredicted RBP29.12■■■□□ 2.25
TSPAN4-203ENST00000397397 MPNDQ8N594 471 aa29.12■■■□□ 2.25
TSPAN4-203ENST00000397397 KDM2BQ8NHM5 1336 aa29.12■■■□□ 2.25
TSPAN4-203ENST00000397397 DPP8Q6V1X1 898 aaPredicted RBP29.11■■■□□ 2.25
TSPAN4-203ENST00000397397 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP29.11■■■□□ 2.25
TSPAN4-203ENST00000397397 SMARCA5O60264 1052 aaPredicted RBP29.11■■■□□ 2.25
TSPAN4-203ENST00000397397 ANKRD45Q5TZF3 282 aa29.11■■■□□ 2.25
TSPAN4-203ENST00000397397 BCL11AQ9H165 835 aa29.11■■■□□ 2.25
TSPAN4-203ENST00000397397 IL1RAPL2Q9NP60 686 aa29.11■■■□□ 2.25
TSPAN4-203ENST00000397397 PODXL2Q9NZ53 605 aa29.11■■■□□ 2.25
TSPAN4-203ENST00000397397 KCNJ4P48050 445 aa29.1■■■□□ 2.25
TSPAN4-203ENST00000397397 GRIPAP1Q4V328 841 aa29.1■■■□□ 2.25
TSPAN4-203ENST00000397397 ZBTB47Q9UFB7 747 aaPredicted RBP29.1■■■□□ 2.25
TSPAN4-203ENST00000397397 GGA1Q9UJY5 639 aa29.1■■■□□ 2.25
TSPAN4-203ENST00000397397 AKAP2Q9Y2D5 859 aa29.1■■■□□ 2.25
TSPAN4-203ENST00000397397 LTBP1Q14766 1721 aa29.09■■■□□ 2.25
TSPAN4-203ENST00000397397 SNAP23O00161 211 aa29.09■■■□□ 2.25
TSPAN4-203ENST00000397397 UFL1O94874 794 aa29.09■■■□□ 2.25
TSPAN4-203ENST00000397397 ATP2B4P23634 1241 aa29.09■■■□□ 2.25
TSPAN4-203ENST00000397397 RTKN2Q8IZC4 609 aa29.09■■■□□ 2.25
TSPAN4-203ENST00000397397 LEMD3Q9Y2U8 911 aa29.09■■■□□ 2.25
TSPAN4-203ENST00000397397 PUM3Q15397 648 aaKnown RBP29.08■■■□□ 2.25
TSPAN4-203ENST00000397397 ATP2B3Q16720 1220 aa29.08■■■□□ 2.25
TSPAN4-203ENST00000397397 ZNF804BA4D1E1 1349 aa29.08■■■□□ 2.24
TSPAN4-203ENST00000397397 WTIPA6NIX2 430 aaPredicted RBP29.07■■■□□ 2.24
TSPAN4-203ENST00000397397 C6orf229H3BNL8 230 aa29.07■■■□□ 2.24
TSPAN4-203ENST00000397397 UBE4AQ14139 1066 aa29.07■■■□□ 2.24
TSPAN4-203ENST00000397397 TBC1D16Q8TBP0 767 aa29.07■■■□□ 2.24
TSPAN4-203ENST00000397397 GPR108Q9NPR9 543 aa29.07■■■□□ 2.24
TSPAN4-203ENST00000397397 SNED1Q8TER0 1413 aa29.07■■■□□ 2.24
TSPAN4-203ENST00000397397 TNNI3KQ59H18 835 aa29.06■■■□□ 2.24
TSPAN4-203ENST00000397397 CLASRPQ8N2M8 674 aaKnown RBP29.06■■■□□ 2.24
TSPAN4-203ENST00000397397 POLLQ9UGP5 575 aa29.06■■■□□ 2.24
TSPAN4-203ENST00000397397 FPGT-TNNI3KV9GXZ4 949 aa29.06■■■□□ 2.24
TSPAN4-203ENST00000397397 ZNF609O15014 1411 aa29.05■■■□□ 2.24
TSPAN4-203ENST00000397397 FGFR2P21802 821 aa29.05■■■□□ 2.24
TSPAN4-203ENST00000397397 DUOX1Q9NRD9 1551 aa29.05■■■□□ 2.24
TSPAN4-203ENST00000397397 FER1L6Q2WGJ9 1857 aa29.05■■■□□ 2.24
TSPAN4-203ENST00000397397 A0A1B0GUL7 405 aa29.04■■■□□ 2.24
TSPAN4-203ENST00000397397 SLC5A1P13866 664 aa29.04■■■□□ 2.24
TSPAN4-203ENST00000397397 TIMM10P62072 90 aa29.04■■■□□ 2.24
TSPAN4-203ENST00000397397 NUCB1Q02818 461 aa29.04■■■□□ 2.24
TSPAN4-203ENST00000397397 LPIN2Q92539 896 aa29.04■■■□□ 2.24
TSPAN4-203ENST00000397397 NEUROD6Q96NK8 337 aa29.04■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms