RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 MAP3K2Q9Y2U5 619 aa16.63■□□□□ 0.25
SEC13-209ENST00000397117 TRAF5O00463 557 aa16.62■□□□□ 0.25
SEC13-209ENST00000397117 ANKRD13DQ6ZTN6 518 aa16.62■□□□□ 0.25
SEC13-209ENST00000397117 NIM1KQ8IY84 436 aa16.62■□□□□ 0.25
SEC13-209ENST00000397117 ECE1P42892 770 aa16.61■□□□□ 0.25
SEC13-209ENST00000397117 PARP10Q53GL7 1025 aa16.61■□□□□ 0.25
SEC13-209ENST00000397117 CYP4F22Q6NT55 531 aa16.61■□□□□ 0.25
SEC13-209ENST00000397117 PPP1R42Q7Z4L9 355 aa16.61■□□□□ 0.25
SEC13-209ENST00000397117 NLRP3Q96P20 1036 aa16.61■□□□□ 0.25
SEC13-209ENST00000397117 ATP6V0A2Q9Y487 856 aa16.61■□□□□ 0.25
SEC13-209ENST00000397117 TLL2Q9Y6L7 1015 aa16.61■□□□□ 0.25
SEC13-209ENST00000397117 ZBTB7BO15156 539 aaPredicted RBP16.6■□□□□ 0.25
SEC13-209ENST00000397117 PPIP5K2O43314 1243 aa16.6■□□□□ 0.25
SEC13-209ENST00000397117 GPR101Q96P66 508 aaPredicted RBP16.6■□□□□ 0.25
SEC13-209ENST00000397117 SRCIN1Q9C0H9 1055 aa16.6■□□□□ 0.25
SEC13-209ENST00000397117 GPRC5DQ9NZD1 345 aa16.6■□□□□ 0.25
SEC13-209ENST00000397117 CXCL9Q07325 125 aa16.59■□□□□ 0.25
SEC13-209ENST00000397117 NEXNQ0ZGT2 675 aa16.59■□□□□ 0.25
SEC13-209ENST00000397117 AOC3Q16853 763 aa16.59■□□□□ 0.25
SEC13-209ENST00000397117 RTFDC1Q9BY42 306 aaPredicted RBP16.59■□□□□ 0.25
SEC13-209ENST00000397117 ADARB2Q9NS39 739 aaKnown RBP16.59■□□□□ 0.25
SEC13-209ENST00000397117 ZBTB40Q9NUA8 1239 aa16.59■□□□□ 0.25
SEC13-209ENST00000397117 LAMB2P55268 1798 aa16.59■□□□□ 0.25
SEC13-209ENST00000397117 PLBD2Q8NHP8 589 aa16.59■□□□□ 0.25
SEC13-209ENST00000397117 PGAP2Q9UHJ9 254 aa16.59■□□□□ 0.25
SEC13-209ENST00000397117 ZNRF3Q9ULT6 936 aa16.59■□□□□ 0.25
SEC13-209ENST00000397117 ANKRD36CQ5JPF3 1778 aa16.59■□□□□ 0.25
SEC13-209ENST00000397117 BEND3Q5T5X7 828 aa16.58■□□□□ 0.24
SEC13-209ENST00000397117 UTP14AQ9BVJ6 771 aaKnown RBP16.58■□□□□ 0.24
SEC13-209ENST00000397117 MAP2K2P36507 400 aa16.57■□□□□ 0.24
SEC13-209ENST00000397117 PAXIP1Q6ZW49 1069 aaPredicted RBP16.57■□□□□ 0.24
SEC13-209ENST00000397117 SP8Q8IXZ3 490 aa16.57■□□□□ 0.24
SEC13-209ENST00000397117 SUPT20HQ8NEM7 779 aa16.57■□□□□ 0.24
SEC13-209ENST00000397117 METTL22Q9BUU2 404 aaPredicted RBP16.57■□□□□ 0.24
SEC13-209ENST00000397117 TMX4Q9H1E5 349 aaPredicted RBP16.57■□□□□ 0.24
SEC13-209ENST00000397117 BBOX1O75936 387 aa16.56■□□□□ 0.24
SEC13-209ENST00000397117 LINS1Q8NG48 757 aa16.56■□□□□ 0.24
SEC13-209ENST00000397117 BEGAINQ9BUH8 593 aa16.56■□□□□ 0.24
SEC13-209ENST00000397117 TAF1P21675 1872 aa16.56■□□□□ 0.24
SEC13-209ENST00000397117 AOC2O75106 756 aa16.56■□□□□ 0.24
SEC13-209ENST00000397117 ALDH1L1O75891 902 aa16.56■□□□□ 0.24
SEC13-209ENST00000397117 GNAI3P08754 354 aa16.56■□□□□ 0.24
SEC13-209ENST00000397117 GMPSP49915 693 aaPredicted RBP16.56■□□□□ 0.24
SEC13-209ENST00000397117 GRM1Q13255 1194 aa16.56■□□□□ 0.24
SEC13-209ENST00000397117 SAPCD2Q86UD0 394 aa16.56■□□□□ 0.24
SEC13-209ENST00000397117 MEIS3Q99687 375 aa16.56■□□□□ 0.24
SEC13-209ENST00000397117 MYD88Q99836 296 aa16.56■□□□□ 0.24
SEC13-209ENST00000397117 CASP8AP2Q9UKL3 1982 aa16.55■□□□□ 0.24
SEC13-209ENST00000397117 MPNDQ8N594 471 aa16.55■□□□□ 0.24
SEC13-209ENST00000397117 HHIPL1Q96JK4 782 aa16.55■□□□□ 0.24
SEC13-209ENST00000397117 GLIS2Q9BZE0 524 aaPredicted RBP16.55■□□□□ 0.24
SEC13-209ENST00000397117 PCDHB15Q9Y5E8 787 aa16.55■□□□□ 0.24
SEC13-209ENST00000397117 CELF2O95319 508 aaKnown RBP16.54■□□□□ 0.24
SEC13-209ENST00000397117 HIRAP54198 1017 aaPredicted RBP16.54■□□□□ 0.24
SEC13-209ENST00000397117 KIAA2012Q0VF49 1180 aa16.54■□□□□ 0.24
SEC13-209ENST00000397117 CIAPIN1Q6FI81 312 aa16.54■□□□□ 0.24
SEC13-209ENST00000397117 DPP8Q6V1X1 898 aaPredicted RBP16.54■□□□□ 0.24
SEC13-209ENST00000397117 C1orf115Q9H7X2 142 aa16.54■□□□□ 0.24
SEC13-209ENST00000397117 CDHR2Q9BYE9 1310 aa16.53■□□□□ 0.24
SEC13-209ENST00000397117 RGS19P49795 217 aa16.53■□□□□ 0.24
SEC13-209ENST00000397117 CWF19L2Q2TBE0 894 aaKnown RBP16.53■□□□□ 0.24
SEC13-209ENST00000397117 FAM161AQ3B820 660 aa16.53■□□□□ 0.24
SEC13-209ENST00000397117 NLRP10Q86W26 655 aa16.53■□□□□ 0.24
SEC13-209ENST00000397117 ZC3H15Q8WU90 426 aaKnown RBP16.53■□□□□ 0.24
SEC13-209ENST00000397117 RWDD1Q9H446 243 aaPredicted RBP16.53■□□□□ 0.24
SEC13-209ENST00000397117 C9orf78Q9NZ63 289 aaPredicted RBP16.53■□□□□ 0.24
SEC13-209ENST00000397117 POLR2AP24928 1970 aaKnown RBP16.53■□□□□ 0.24
SEC13-209ENST00000397117 GNAI2P04899 355 aa16.52■□□□□ 0.24
SEC13-209ENST00000397117 UBTFL1P0CB47 393 aaPredicted RBP16.52■□□□□ 0.24
SEC13-209ENST00000397117 HCLS1P14317 486 aaPredicted RBP16.52■□□□□ 0.24
SEC13-209ENST00000397117 TNIP1Q15025 636 aa16.52■□□□□ 0.24
SEC13-209ENST00000397117 USP44Q9H0E7 712 aa16.52■□□□□ 0.24
SEC13-209ENST00000397117 TSKSQ9UJT2 592 aa16.52■□□□□ 0.24
SEC13-209ENST00000397117 NEURL1BA8MQ27 555 aa16.52■□□□□ 0.23
SEC13-209ENST00000397117 RAD17O75943 681 aa16.52■□□□□ 0.23
SEC13-209ENST00000397117 IGKV5-2P06315 115 aa16.52■□□□□ 0.23
SEC13-209ENST00000397117 HSP90AB3PQ58FF7 597 aa16.52■□□□□ 0.23
SEC13-209ENST00000397117 HDAC5Q9UQL6 1122 aa16.52■□□□□ 0.23
SEC13-209ENST00000397117 CCDC85CA6NKD9 419 aa16.51■□□□□ 0.23
SEC13-209ENST00000397117 YDJCA8MPS7 323 aa16.51■□□□□ 0.23
SEC13-209ENST00000397117 TCIRG1Q13488 830 aa16.51■□□□□ 0.23
SEC13-209ENST00000397117 GRAPQ13588 217 aa16.51■□□□□ 0.23
SEC13-209ENST00000397117 DDX46Q7L014 1031 aaKnown RBP16.51■□□□□ 0.23
SEC13-209ENST00000397117 CENPQQ7L2Z9 268 aaPredicted RBP16.51■□□□□ 0.23
SEC13-209ENST00000397117 GRAPLQ8TC17 118 aaPredicted RBP16.51■□□□□ 0.23
SEC13-209ENST00000397117 TRPM4Q8TD43 1214 aa16.51■□□□□ 0.23
SEC13-209ENST00000397117 ATP5J2-PTCD1G3V325 749 aa16.5■□□□□ 0.23
SEC13-209ENST00000397117 CA12O43570 354 aa16.5■□□□□ 0.23
SEC13-209ENST00000397117 SLC34A2O95436 690 aa16.5■□□□□ 0.23
SEC13-209ENST00000397117 CDC37L1Q7L3B6 337 aa16.5■□□□□ 0.23
SEC13-209ENST00000397117 CNOT7Q9UIV1 285 aaKnown RBP16.5■□□□□ 0.23
SEC13-209ENST00000397117 DUOX1Q9NRD9 1551 aa16.5■□□□□ 0.23
SEC13-209ENST00000397117 LRRC37AA6NMS7 1700 aa16.49■□□□□ 0.23
SEC13-209ENST00000397117 SHTN1A0MZ66 631 aa16.49■□□□□ 0.23
SEC13-209ENST00000397117 GRM8O00222 908 aa16.49■□□□□ 0.23
SEC13-209ENST00000397117 GCKRQ14397 625 aa16.49■□□□□ 0.23
SEC13-209ENST00000397117 TRMT112Q9UI30 125 aaKnown RBP16.49■□□□□ 0.23
SEC13-209ENST00000397117 SH3TC1Q8TE82 1336 aa16.49■□□□□ 0.23
SEC13-209ENST00000397117 IGHDP01880 384 aa16.48■□□□□ 0.23
SEC13-209ENST00000397117 NBPF7P0C2Y1 421 aaPredicted RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms