RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 GGA3Q9NZ52 723 aa19.61■□□□□ 0.73
SEC13-206ENST00000397102 DOK7Q18PE1 504 aa19.6■□□□□ 0.73
SEC13-206ENST00000397102 PSME4Q14997 1843 aa19.6■□□□□ 0.73
SEC13-206ENST00000397102 VIL1P09327 827 aaKnown RBP19.59■□□□□ 0.73
SEC13-206ENST00000397102 PRPF38BQ5VTL8 546 aaKnown RBP19.59■□□□□ 0.73
SEC13-206ENST00000397102 PLBD2Q8NHP8 589 aa19.59■□□□□ 0.73
SEC13-206ENST00000397102 CDCA5Q96FF9 252 aa19.59■□□□□ 0.73
SEC13-206ENST00000397102 ISCA1Q9BUE6 129 aa19.59■□□□□ 0.73
SEC13-206ENST00000397102 PAPPA2Q9BXP8 1791 aa19.59■□□□□ 0.73
SEC13-206ENST00000397102 ZNF609O15014 1411 aa19.59■□□□□ 0.73
SEC13-206ENST00000397102 LMOD3Q0VAK6 560 aa19.58■□□□□ 0.72
SEC13-206ENST00000397102 RASAL3Q86YV0 1011 aa19.58■□□□□ 0.72
SEC13-206ENST00000397102 TBC1D16Q8TBP0 767 aa19.58■□□□□ 0.72
SEC13-206ENST00000397102 ZNF428Q96B54 188 aa19.58■□□□□ 0.72
SEC13-206ENST00000397102 FAM89AQ96GI7 184 aa19.58■□□□□ 0.72
SEC13-206ENST00000397102 ZC3H12CQ9C0D7 883 aaKnown RBP19.57■□□□□ 0.72
SEC13-206ENST00000397102 CHPF2Q9P2E5 772 aa19.57■□□□□ 0.72
SEC13-206ENST00000397102 ASTN2O75129 1339 aaPredicted RBP19.56■□□□□ 0.72
SEC13-206ENST00000397102 FKBP1BP68106 108 aa19.56■□□□□ 0.72
SEC13-206ENST00000397102 ANKRD13DQ6ZTN6 518 aa19.56■□□□□ 0.72
SEC13-206ENST00000397102 PODXL2Q9NZ53 605 aa19.56■□□□□ 0.72
SEC13-206ENST00000397102 TMPOP42166 694 aaKnown RBP19.55■□□□□ 0.72
SEC13-206ENST00000397102 ZNF280AP59817 542 aaPredicted RBP19.55■□□□□ 0.72
SEC13-206ENST00000397102 RPS8P62241 208 aaKnown RBP19.55■□□□□ 0.72
SEC13-206ENST00000397102 KRT24Q2M2I5 525 aa19.55■□□□□ 0.72
SEC13-206ENST00000397102 ATP5J2-PTCD1G3V325 749 aa19.54■□□□□ 0.72
SEC13-206ENST00000397102 G3V3G9 751 aa19.54■□□□□ 0.72
SEC13-206ENST00000397102 PKN2Q16513 984 aaKnown RBP19.54■□□□□ 0.72
SEC13-206ENST00000397102 DCAF8Q5TAQ9 597 aa19.54■□□□□ 0.72
SEC13-206ENST00000397102 ANGEL2Q5VTE6 544 aaKnown RBP19.54■□□□□ 0.72
SEC13-206ENST00000397102 AGBL3Q8NEM8 1001 aa19.54■□□□□ 0.72
SEC13-206ENST00000397102 HPS5Q9UPZ3 1129 aa19.54■□□□□ 0.72
SEC13-206ENST00000397102 CHL1O00533 1208 aa19.53■□□□□ 0.72
SEC13-206ENST00000397102 IRS4O14654 1257 aaPredicted RBP19.53■□□□□ 0.72
SEC13-206ENST00000397102 SCARF1Q14162 830 aa19.53■□□□□ 0.72
SEC13-206ENST00000397102 HDGFL1Q5TGJ6 251 aa19.53■□□□□ 0.72
SEC13-206ENST00000397102 RSBN1LQ6PCB5 846 aaPredicted RBP19.53■□□□□ 0.72
SEC13-206ENST00000397102 PITPNM2Q9BZ72 1349 aa19.52■□□□□ 0.72
SEC13-206ENST00000397102 UFL1O94874 794 aa19.52■□□□□ 0.72
SEC13-206ENST00000397102 HOXB7P09629 217 aa19.52■□□□□ 0.72
SEC13-206ENST00000397102 TRIM28Q13263 835 aaKnown RBP19.52■□□□□ 0.72
SEC13-206ENST00000397102 RTL5Q5HYW3 569 aaPredicted RBP19.52■□□□□ 0.72
SEC13-206ENST00000397102 DBF4Q9UBU7 674 aaPredicted RBP19.52■□□□□ 0.72
SEC13-206ENST00000397102 ANKIB1Q9P2G1 1089 aa19.51■□□□□ 0.71
SEC13-206ENST00000397102 GGA1Q9UJY5 639 aa19.51■□□□□ 0.71
SEC13-206ENST00000397102 HDAC9Q9UKV0 1011 aa19.51■□□□□ 0.71
SEC13-206ENST00000397102 ZNF296Q8WUU4 475 aaPredicted RBP19.5■□□□□ 0.71
SEC13-206ENST00000397102 MYOZ2Q9NPC6 264 aa19.5■□□□□ 0.71
SEC13-206ENST00000397102 HSP90B1P14625 803 aaKnown RBP19.49■□□□□ 0.71
SEC13-206ENST00000397102 GMLQ99445 158 aa19.49■□□□□ 0.71
SEC13-206ENST00000397102 SEC31BQ9NQW1 1179 aa19.49■□□□□ 0.71
SEC13-206ENST00000397102 HYPKQ9NX55 129 aa19.49■□□□□ 0.71
SEC13-206ENST00000397102 USP17L8P0C7I0 530 aa19.48■□□□□ 0.71
SEC13-206ENST00000397102 NOM1Q5C9Z4 860 aaKnown RBP19.48■□□□□ 0.71
SEC13-206ENST00000397102 ZBTB38Q8NAP3 1195 aaPredicted RBP19.48■□□□□ 0.71
SEC13-206ENST00000397102 LAS1LQ9Y4W2 734 aaKnown RBP19.48■□□□□ 0.71
SEC13-206ENST00000397102 TBC1D8O95759 1140 aa19.47■□□□□ 0.71
SEC13-206ENST00000397102 MOB2Q70IA6 237 aa19.47■□□□□ 0.71
SEC13-206ENST00000397102 UBE2Q2LH0YL09 131 aa19.46■□□□□ 0.71
SEC13-206ENST00000397102 TM4SF4P48230 202 aa19.46■□□□□ 0.71
SEC13-206ENST00000397102 NEUROD2Q15784 382 aa19.46■□□□□ 0.71
SEC13-206ENST00000397102 CCDC152Q4G0S7 254 aa19.46■□□□□ 0.71
SEC13-206ENST00000397102 PODNQ7Z5L7 613 aa19.46■□□□□ 0.71
SEC13-206ENST00000397102 XDHP47989 1333 aa19.46■□□□□ 0.71
SEC13-206ENST00000397102 ZNF646O15015 1829 aaPredicted RBP19.46■□□□□ 0.71
SEC13-206ENST00000397102 USP17L3A6NCW0 530 aa19.45■□□□□ 0.7
SEC13-206ENST00000397102 USP17L4A6NCW7 530 aa19.45■□□□□ 0.7
SEC13-206ENST00000397102 GPR25O00155 361 aa19.45■□□□□ 0.7
SEC13-206ENST00000397102 FBXO46Q6PJ61 603 aaPredicted RBP19.45■□□□□ 0.7
SEC13-206ENST00000397102 USP17L1Q7RTZ2 530 aa19.45■□□□□ 0.7
SEC13-206ENST00000397102 ATP2B4P23634 1241 aa19.44■□□□□ 0.7
SEC13-206ENST00000397102 RIC3Q7Z5B4 369 aa19.44■□□□□ 0.7
SEC13-206ENST00000397102 SCAF8Q9UPN6 1271 aaKnown RBP19.44■□□□□ 0.7
SEC13-206ENST00000397102 TRIM35Q9UPQ4 493 aa19.44■□□□□ 0.7
SEC13-206ENST00000397102 PDE8AO60658 829 aa19.43■□□□□ 0.7
SEC13-206ENST00000397102 PCCAP05165 728 aaPredicted RBP19.43■□□□□ 0.7
SEC13-206ENST00000397102 GOLGA2Q08379 1002 aa19.43■□□□□ 0.7
SEC13-206ENST00000397102 DUSP27Q5VZP5 1158 aa19.43■□□□□ 0.7
SEC13-206ENST00000397102 CFHR5Q9BXR6 569 aa19.43■□□□□ 0.7
SEC13-206ENST00000397102 NF2P35240 595 aa19.42■□□□□ 0.7
SEC13-206ENST00000397102 SREBF2Q12772 1141 aa19.42■□□□□ 0.7
SEC13-206ENST00000397102 TTLL12Q14166 644 aaPredicted RBP19.42■□□□□ 0.7
SEC13-206ENST00000397102 NBPF9Q3BBW0 867 aa19.42■□□□□ 0.7
SEC13-206ENST00000397102 PRAMEF18Q5VWM3 479 aa19.42■□□□□ 0.7
SEC13-206ENST00000397102 ANKRD18AQ8IVF6 992 aa19.42■□□□□ 0.7
SEC13-206ENST00000397102 CCDC146Q8IYE0 955 aa19.42■□□□□ 0.7
SEC13-206ENST00000397102 CCDC191Q8NCU4 936 aa19.42■□□□□ 0.7
SEC13-206ENST00000397102 GCC1Q96CN9 775 aa19.41■□□□□ 0.7
SEC13-206ENST00000397102 MYD88Q99836 296 aa19.41■□□□□ 0.7
SEC13-206ENST00000397102 SPEF2Q9C093 1822 aa19.41■□□□□ 0.7
SEC13-206ENST00000397102 MED23Q9ULK4 1368 aa19.41■□□□□ 0.7
SEC13-206ENST00000397102 FKTNO75072 461 aa19.4■□□□□ 0.7
SEC13-206ENST00000397102 RALBP1Q15311 655 aa19.4■□□□□ 0.7
SEC13-206ENST00000397102 CCDC85AQ96PX6 553 aaPredicted RBP19.4■□□□□ 0.7
SEC13-206ENST00000397102 MYH3P11055 1940 aa19.39■□□□□ 0.7
SEC13-206ENST00000397102 WNT10BO00744 389 aa19.39■□□□□ 0.69
SEC13-206ENST00000397102 MKRN3Q13064 507 aaKnown RBP19.39■□□□□ 0.69
SEC13-206ENST00000397102 OGFOD1Q8N543 542 aa19.39■□□□□ 0.69
SEC13-206ENST00000397102 RUNDC1Q96C34 613 aa19.39■□□□□ 0.69
SEC13-206ENST00000397102 PHAXQ9H814 394 aaKnown RBP19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 154.9 ms